Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Schistosoma_20mattheei_20[genbank_20GCA_5F000951455.1_202014-09-25] 62,061 sequences; 340,818,150 total letters Query= NC_028094.1 Length=473558 Score E Sequences producing significant alignments: (Bits) Value seq6384 288 3e-72 seq60628 217 4e-51 seq21369 185 3e-41 seq30251 134 4e-26 seq7562 134 4e-26 seq2770 116 1e-20 seq1181 111 5e-19 seq2578 102 2e-16 >seq6384 Length=14045 Score = 288 bits (318), Expect = 3e-72 Identities = 1052/1613 (65%), Gaps = 72/1613 (4%) Strand=Plus/Plus Query 349225 TTATTCTT--GTGTTGCTGTTTGGCAAAATGATCGTGTAGAAATAATTGCAAATGATCAA 349282 ||||| || |||||| ||| | ||| | || || || || ||||| |||||||| Sbjct 8554 TTATTTTTTAGTGTTGGTGTATTTCAAGGAGGCCGAGTTGAGATTATTGCGAATGATCAG 8613 Query 349283 GGTAACAGAACAACGCCATCATACGTTGCATTTACC---GAAACTGAGCGTATGATTGGT 349339 |||||||| | || || |||||||| ||||| || ||| ||||| | ||||| Sbjct 8614 GGTAACAGGATTACTCCCTCATACGTAGCATTCACTCCGGAAGGAGAGCGATTAATTGGG 8673 Query 349340 GATTCTGCAAAAAATCAAGCTG-CTGCTAATCCAAAAAATACGGTTTTTGATGCTAAGCG 349398 ||| |||| ||||| || |||| | | |||||| |||| || |||| || | ||| | Sbjct 8674 GATGCTGCTAAAAACCA-GCTGACATCAAATCCAGAAAACACAATTTTCGACGTCAAGAG 8732 Query 349399 ACTTATTGGTAGAAGTTTTTCTGACAAATCTACACAATCTGATCTAAAACATTTTCCTTT 349458 ||||||||| || | || ||| | || |||| ||| ||| |||| ||||| Sbjct 8733 ACTTATTGGAAGGAAGTTCGATGAATCAGCTGTACAAAATGACATAAGTCATTACCCTTT 8792 Query 349459 TACTGTTGTTCC--AAAAGACGGTGATAAACCAATTATTGAGGTTGAATATAAAGGTGAA 349516 | | |||||| |||||| | |||||| ||| || ||| | | | ||| Sbjct 8793 TTCCGTTGTTAATAAAAAGA-----ACAAACCATATATCGAAGTTCACGTTGGATCAGAA 8847 Query 349517 CAAAAACAATTTTTACCCGAAGAAATTTCATCAATGGTTTTAGTTAAAATGAAGGAAATT 349576 || ||| || || || || || | ||||| |||| || ||||| || || Sbjct 8848 GTCAAGACGTTTGCCCCAGAGGAGATCTCTGCTATGGTGTTAGGGAAGATGAAAGAGTTT 8907 Query 349577 GCTGAAGCATATTTAGGTGAAACAGTAACTGATGCTGTTATTACTGTACCAGCCTATTTT 349636 |||||| | ||| | || ||| || || | || || | ||||| |||||||||||| Sbjct 8908 GCTGAATCCTATCTTGGCAAAAAGGTTACCCACGCAGTAGTCACTGTCCCAGCCTATTTT 8967 Query 349637 AATGATGCCCAGCGTTCTGCAACAAAAGATGCTGGCAGCATTGCGGGGTTAAATGTTCTA 349696 || ||||| ||||| ||||| || |||||||||| ||||| || || ||| | || Sbjct 8968 AACGATGCACAGCGCCAGGCAACCAAGGATGCTGGCACAATTGCTGGTTTGAATATACTC 9027 Query 349697 AGAATGATTAATGAACCCACTGCTGCAGCAATTGCATATGGGCTTGATAAAATGAGTGAC 349756 | || ||||||||||| |||||||| || ||||| || || || ||||| || || Sbjct 9028 CGGATCATTAATGAACCAACTGCTGCTGCGATTGCTTACGGTCTAGATAA---GAAAGAT 9084 Query 349757 CAAGaaaaaaaTATTCTTATTTTTGATTTAGGTGGTGGTACTTTTGATGTATCACTACTA 349816 || || |||||||| || |||||| | || ||||||||||| || || |||||||| Sbjct 9085 GGTGAGAAGAATATTCTGATATTTGATCTTGGAGGTGGTACTTTCGACGTTTCACTACTT 9144 Query 349817 ACACTTGAAGAGGGAATTTTTGAAGTTAAAGCAACTGCTGGTGATACACATCTTGGTGGA 349876 ||| |||| | || | || ||||| || || |||||| ||||||||||||||| Sbjct 9145 ACAATTGAGAACGGTGTGTTCGAAGTAGTTGCTACAAATGGTGACACACATCTTGGTGGA 9204 Query 349877 GAAGATTTTGATAATCGTCTCGTTTCGCATTTTGTTAAAGAATTT---AAGCGTCAAGCT 349933 || || || || | ||| | ||| ||||| | || |||| || ||| Sbjct 9205 GAGGACTTCGACCAACGTGTTGTTGATCATTTCGCAAAGCTATTTCTGAAAAAGAAAGGC 9264 Query 349934 AAAATTGATATTGGAGATAATCCTAGAGCAATGCGTCGCCTAAGAACTG---CGTG---- 349986 ||| |||||| || | || | | || | | | || ||||| || | Sbjct 9265 AAA---GATATT----ATGA-CCAATA--AACGTGCAGTACAAAAACTGAGACGGGAAGT 9314 Query 349987 TGAACGTGCTAAGCGTTCCTTATCATCTAC-TACCCAAACCTCT--ATTGA-AATTGATT 350042 |||| || || | | | | ||| ||||| | | | | ||| | |||||| | Sbjct 9315 TGAAAAAGCCAAAAGAACTCT---AAGTACATACCC-ATCTTTTACATTAACAATTGAGT 9370 Query 350043 CTCTTGCTGATGGCAAAGATTTCTTTTCATCTATTACACGTGCTCGGTTTGA-AGAATTA 350101 | ||| |||||| | ||||| | | | ||||||| || ||||| | ||||| Sbjct 9371 CCCTTATTGATGGTGAGGATTTTTCCGAAACACTTACACGAGCAGCATTTGAGAAAATTA 9430 Query 350102 TGTATGGA--TCTTTTTAGAGCAACAATGGATCCTGTGGAAAAAGTATTAAAAGATGCAA 350159 ||||| | || ||| | ||| |||| || || ||||||| | ||||||| Sbjct 9431 -ACATGGACTTGTTCTTAAA--AACTTTGGAACCAGTCAAAAAAGTCCTTGAAGATGCGG 9487 Query 350160 AAATGTCCAAAAATCAGATTGATGAAGTAGTTTTAGTTGGTGGTTCTACACGTATTCCAA 350219 ||| || | | ||||||||||| || ||||||| || ||||| | ||||| | Sbjct 9488 GCATGAAAAAGGAAGATATTGATGAAGTTATTCTAGTTGGCGGGTCTACTCAAATTCCTA 9547 Query 350220 AAGTTCAACAGTTACTATCTGAGTTTTTTAATGGCAAAGAACCTTCTAGATCAATTAATC 350279 | |||| | | ||| | | ||| || || ||||||| | | | | |||||| Sbjct 9548 AGGTTCGTGAACTTCTA-CGAAATTTCTT--TGAAAAAGAACTTAACACAGGAGTTAATC 9604 Query 350280 CAGATGAAGCTGTTGCATATGGTGCTGCTGTTCAGGCATCTATTTTATCTGGAAATAAGA 350339 | |||||||| ||||| || ||||| |||||||||| || | ||| ||| Sbjct 9605 CGGATGAAGCAGTTGCGTACGGTGCAGCTGTTCAGGGTGGCGTTATTGGTGG--TGTAGA 9662 Query 350340 GTTCTAAAATTGATGATCTATTACTACTAGATGTAACTCCACTTTCGCTTGGATTAGAAA 350399 || | || || | | || |||||||| ||| | | | || | |||| Sbjct 9663 ----AAACACTGGTGGCGTTGTGCTTTTAGATGTATGCCCATTGACTTTGGGTATTGAAA 9718 Query 350400 CTTCTGGTGAAGTAATGACTGTTCTTATTCCTAGAAATAGTACTGTACCTACAAAAAAGT 350459 | |||| || ||||| |||||||| ||||||| | | || || || |||| Sbjct 9719 CGGTCGGTGGTGTCATGACGAAACTTATTCCAAGAAATACAGTTATCCCAACCAAGAAGT 9778 Query 350460 CCCAAACTTTTTCTACATTTGCAGATAATCAGCCAGCGGTAACAATTCAAGTATTTGAAG 350519 | || | ||||||||| ||| || || ||||| | || || || ||||| ||||| | Sbjct 9779 CGCAGATATTTTCTACAGCTGCTGACAACCAGCCGACTGTCACGATACAAGTTTTTGAGG 9838 Query 350520 GTGAACGTGCTCGCACTAAAGAT-AATAATAAACTTGGAGAATTTACCCTAAGTGAAATT 350578 ||||||| ||| || |||| | ||| || ||||| | ||| ||| | | ||| Sbjct 9839 GTGAACGGGCTATGAC-AAAGTTCAATCATTTTCTTGGCAAGTTTGACCTGACAGGTATT 9897 Query 350579 CCAC---CAATGCCTAGAGGAGTTCCTCAGATTGAAGTCTCTTTCGATATTGATTCAAAT 350635 || | || ||| | || ||||| || ||||| || | ||||| ||||| || Sbjct 9898 CCTCCGGCACTGC---GTGGTGTTCCACAAATTGAGGTGACATTCGAGATTGACGTTAAC 9954 Query 350636 GGTATTTTAAATGTTACCGCAGTTGAAAAATCAAGTGGTAAAAGTAGTAAGGTAGAAATT 350695 || || | | ||| |||||| || ||| || |||| | | || ||||||| Sbjct 9955 GGCATACTGAGAGTTTCCGCAGAAGATAAAGGAACCGGTAGTAAAAACAAAATAGAAATC 10014 Query 350696 ACTAATGATAAATCTAGACTTTCA-AAAGAAGATATTGAGAAAATGACACAAGATGCCGA 350754 | ||| || || | | ||| | |||||| || || ||||||| | ||||| || Sbjct 10015 AATAAAGACCAACATCG-CTTAGATGCAGAAGAAATCGAAAAAATGATTAATGATGCAGA 10073 Query 350755 ATCATATGCTAAGGAAGATGAAGAA-TTTAGAGAGCGTGTTAATTCTAAAAAT 350806 | | ||| |||| ||||| || | |||||||||| || | | |||| Sbjct 10074 ACAGTTTGCAGCTTCAGAT-AAGAAGTTAAAAGAGCGTGTTGATGCCAGAAAT 10125 >seq60628 Length=531 Score = 217 bits (240), Expect = 4e-51 Identities = 368/531 (69%), Gaps = 4/531 (1%) Strand=Plus/Minus Query 349787 GGTGGTGGTACTTTTGATGTATCACTACTAACACTTGAAGAGGGAATTTTTGAAGTTAAA 349846 ||||||||||| |||||||| || | | ||| |||| || || || || || || || Sbjct 529 GGTGGTGGTACATTTGATGTGTCCATCTTGACAATTGAGGATGGTATATTCGAGGTGAAG 470 Query 349847 GCAACTGCTGGTGATACACATCTTGGTGGAGAAGATTTTGATAATCGTCTCGTTTCGCAT 349906 | ||||||||||||||||| | || || ||||||||||| |||||||| || || Sbjct 469 TCTACTGCTGGTGATACACACTTGGGAGGTGAAGATTTTGACAATCGTCTGGTGGATCAC 410 Query 349907 TTTGTTAAAGAATTTAAGCGTCAAGCTAAAATTGATATTGGAGATAATCCTAGAGCAATG 349966 ||||| ||||| || || || || | || ||| | || ||| | ||| || Sbjct 409 TTTGTGAAAGAGTTCCAGAAGAAATTTAGTAAAGACATTCGTGACAATAAGCGTGCATTG 350 Query 349967 CGTCGCCTAAGAACTGCGTGTGAACGTGCTAAGCGTTCCTTATCATCTACTACCCAAACC 350026 |||||||| ||||| || ||||||||||| || ||| | || || | |||||||| Sbjct 349 CGTCGCCTGAGAACAGCATGTGAACGTGCGAAACGTACATTGAGTTCGAGCACCCAAACG 290 Query 350027 TCTATTGAAATTGATTCTCTTGCTGATGGCAAAGATTTCTTTTCATCTATTACACGTGCT 350086 | | || ||||| || | |||||| | ||||| | | || ||||| ||||| Sbjct 289 AATCTGGAGATTGACTCGTTGTGTGATGGTATTGATTTTTACACGTCGATTACTCGTGCA 230 Query 350087 CGGTTTGAAGAATTATGTATG--GATCTTTTTAGAGCAACAATGGATCCTGTGGAAAAAG 350144 || ||||| || || | ||| ||||| || | | ||| ||| |||||| || || | Sbjct 229 CGATTTGAGGAGTT--GAATGCCGATCTATTCCGTGGTACATTGGGTCCTGTTGAGAAGG 172 Query 350145 TATTAAAAGATGCAAAAATGTCCAAAAATCAGATTGATGAAGTAGTTTTAGTTGGTGGTT 350204 || |||||| || ||| || |||||| | ||| |||| || |||||||||| Sbjct 171 CTTTGCGAGATGCTAAGATGGATAAGGCCCAGATTCACGAAATAGTGTTGGTTGGTGGTT 112 Query 350205 CTACACGTATTCCAAAAGTTCAACAGTTACTATCTGAGTTTTTTAATGGCAAAGAACCTT 350264 | || ||||| || || || || || | | || || || || || || || Sbjct 111 CCACTCGTATCCCTAAGGTGCAGAAGCTGTTGCAGGACTTCTTCAACGGGAAGGAGTTGA 52 Query 350265 CTAGATCAATTAATCCAGATGAAGCTGTTGCATATGGTGCTGCTGTTCAGG 350315 || ||| |||||||| ||||||||||| || |||||||| ||||| |||| Sbjct 51 ATAAATCTATTAATCCGGATGAAGCTGTGGCTTATGGTGCAGCTGTGCAGG 1 Score = 167 bits (184), Expect = 7e-36 Identities = 359/532 (67%), Gaps = 6/532 (1%) Strand=Plus/Plus Query 183255 TGAACAGCTGCACCATATGCAACAGCTTCATCTGGGTTAATTGAACGAGATAATTCTTTG 183314 || |||||||||||||| || ||||||||||| || ||||| || | || || || Sbjct 3 TGCACAGCTGCACCATAAGCCACAGCTTCATCCGGATTAATAGATTTATTCAACTCCTTC 62 Query 183315 CCATTAAAAAATTC-TGAAAGCATTTGTTGAATTTTTGGAATTCTAGTTGAACCACCGAC 183373 || || || || || || || || | || | || || || | ||| |||||||| || Sbjct 63 CCGTTGAAGAAGTCCTGCAA-CAGCTTCTGCACCTTAGGGATACGAGTGGAACCACCAAC 121 Query 183374 TAATACTACTTCATCGATATTACTTTTACTAATTTGTGAATCTTTTAAAACTTTTTCAAC 183433 || |||| ||| | || | ||| || | | |||| ||| | || ||||| Sbjct 122 CAACACTATTTCGTGAATCTGGGCCTTATCCATCTTAGCATCTCGCAAAGCCTTCTCAAC 181 Query 183434 AGGGTCCATAGTTTTTCTAAATAAATCTATACATAACTCTTCTAATCTTGCTCTAGTTAA 183493 ||| ||| || | |||| ||| | ||||| || |||| ||| | ||| | Sbjct 182 AGGACCCAATGTACCACGGAATAGATCGGCATTCAACTCCTCAAATCGTGCACGAGTAAT 241 Query 183494 AGATGaaaaaaaGTCAATACCATTATATAAGGAATCAATTTCAATCGAT--GTTTGTGTA 183551 || | |||| |||||||||| | | || || ||||| || | ||| ||||| || Sbjct 242 CGACGTGTAAAAATCAATACCATCACACAACGAGTCAATCTCCA--GATTCGTTTGGGTG 299 Query 183552 GATGATGATAATGTTCTTTTAGCTCGTTCACATGCTGTTCTTAGTCGACGTAATGATCTT 183611 || ||||| | ||| || ||||||||||||||||| || ||||| |||| | Sbjct 300 CTCGAACTCAATGTACGTTTCGCACGTTCACATGCTGTTCTCAGGCGACGCAATGCACGC 359 Query 183612 GGATTATCTGTAATATCTTGTTTATGTTTTCTTTTAAATTCAGTAATAAAATGTTGAAGT 183671 ||| || ||| |||| || ||| | | || || | | ||| || | | Sbjct 360 TTATTGTCACGAATGTCTTTACTAAATTTCTTCTGGAACTCTTTCACAAAGTGATCCACC 419 Query 183672 AATCTTGTATCAAAATCTTCACCACCTAAATGTGTATCGCCAGCAGTAGCTTTAACTTCA 183731 | | | |||||||||||||| || || |||||||| |||||||||| || || || Sbjct 420 AGACGATTGTCAAAATCTTCACCTCCCAAGTGTGTATCACCAGCAGTAGACTTCACCTCG 479 Query 183732 AATATTCCGTCTTCAATATTTAAAATTGATACATCAAATGTACCACCACCCA 183783 ||||| || || ||||| | || || || |||||||||||||||||||||| Sbjct 480 AATATACCATCCTCAATTGTCAAGATGGACACATCAAATGTACCACCACCCA 531 >seq21369 Length=4562 Score = 185 bits (204), Expect = 3e-41 Identities = 179/230 (78%), Gaps = 0/230 (0%) Strand=Plus/Minus Query 140508 ATACCACCACGTAATCTTAGAACAAGATGAAGAGTAGACTCTTTTTGAATATTATAATCA 140567 ||||||||||| | | || ||||||||||| || || || || || |||||||| || Sbjct 957 ATACCACCACGAAGACGGAGGACAAGATGAAGTGTTGATTCCTTCTGTATATTATAGTCG 898 Query 140568 GATAATGTTCGCCCATCTTCAAGTTGTTTTCCAGCAAAGATTAGACGTTGCTGATCAGGA 140627 || | ||||| |||||||| |||||||| |||||||| ||||||||||| || || || Sbjct 897 GAAAGAGTTCGTCCATCTTCCAGTTGTTTGCCAGCAAAAATTAGACGTTGTTGGTCTGGT 838 Query 140628 GGAATTCCTTCTTTATCCTGAATTTTAGCTTTTACATTATCAATCGAATCAGATGGTTCA 140687 || || ||||||||||| |||||||| || || || || || | ||||| || ||| Sbjct 837 GGGATGCCTTCTTTATCTTGAATTTTCGCCTTAACTGCTTCTATTGTATCAGCAGGCTCA 778 Query 140688 ACTTCAAGTGTAACTGTCTTTCCGGTTAGTGTTTTTACAAAAATCTGCAT 140737 ||||| || || | || ||||| || ||||| || |||||||||||||| Sbjct 777 ACTTCTAGGGTTATAGTTTTTCCCGTAAGTGTCTTCACAAAAATCTGCAT 728 >seq30251 Length=2492 Score = 134 bits (148), Expect = 4e-26 Identities = 126/154 (82%), Gaps = 6/154 (4%) Strand=Plus/Minus Query 266976 GGCGATAAATTTTCTAGTCGCCACGGACAAAAAGGTACCATTGGTA--CGATTATTCCTG 267033 || |||||||| ||||||| |||||||| |||||||| ||| | || |||| | | Sbjct 555 GGTGATAAATTCGCTAGTCGACACGGACAGAAAGGTACTTGTGGAATTCG-TTAT-CGTC 498 Query 267034 AAGAAAATATGCCATTTA-ATGAAGATGGAATTAGACCTGATATTATTATTAATCCTCAT 267092 ||||| |||||||||| | ||| || ||||||| ||| ||||||||||||||||| || Sbjct 497 AAGAAGATATGCCATTCACATGT-GAAGGAATTACACCAGATATTATTATTAATCCACAC 439 Query 267093 GCTATTCCTAGTCGTATGACAATTGGTCAATTAA 267126 |||||||||||||||||||| ||||| || |||| Sbjct 438 GCTATTCCTAGTCGTATGACTATTGGACATTTAA 405 Score = 100 bits (110), Expect = 9e-16 Identities = 123/164 (75%), Gaps = 3/164 (2%) Strand=Plus/Plus Query 251155 TTCTAATAATTGTCCAATGGTCATTCTACTAGGCAATGCGTGTGGATTAATAATAATATC 251214 ||| | ||| |||||||| ||||| | |||||| | ||||||||||||||||||||||| Sbjct 400 TTCAATTAAATGTCCAATAGTCATACGACTAGGAATAGCGTGTGGATTAATAATAATATC 459 Query 251215 TGGACGAATTCCATCTTCAGTAAAAGGCATATTTTTCTCATCAATAACTAA-ACCAATAG 251273 ||| |||||| || || || |||||| | |||| | ||||| || ||| || Sbjct 460 TGGTGTAATTCCTTCACATGTGAATGGCATA-TCTTCTTGACGATAACGAATTCCACAAG 518 Query 251274 TACCTTTTTGTCCACATCTACTACAAAACTTATCTCCAA-TTGC 251316 ||||||| ||||| || |||| || ||||| |||| |||| Sbjct 519 TACCTTTCTGTCCGTGTCGACTAGCGAATTTATCACCAACTTGC 562 >seq7562 Length=12581 Score = 134 bits (148), Expect = 4e-26 Identities = 133/172 (77%), Gaps = 0/172 (0%) Strand=Plus/Minus Query 266272 ATACTCATTGTGAAATTCATCCAAGTACATTATTAGGTATTTTAGCATCTTGTATTCCAT 266331 |||| |||||||||||||||||||||| |||||||||| | || | ||| |||| Sbjct 4398 ATACACATTGTGAAATTCATCCAAGTATGATATTAGGTATATGTGCTAGTATTATACCAT 4339 Query 266332 TTCCAGAACATAATCAAGCACCTCGTCTAACATATCAATGTGCAATGGGTAAACAGGCTA 266391 | || || ||||||||| |||| | ||||||||| |||| ||||||||||| |||| Sbjct 4338 TCCCTGATCATAATCAATCACCAAGAAATACATATCAAAGTGCTATGGGTAAACAAGCTA 4279 Query 266392 TGGGTATCTATGTTACAAATTTTAATAATAGAATGGATAAAACAGCATATGT 266443 ||||| | ||| ||| |||||| ||| |||||||||| | ||| |||| Sbjct 4278 TGGGTGTGTATATTAGTAATTTTCATACAAGAATGGATACATTAGCTAATGT 4227 >seq2770 Length=21803 Score = 116 bits (128), Expect = 1e-20 Identities = 233/344 (68%), Gaps = 6/344 (2%) Strand=Plus/Minus Query 378169 TTTCTTACAGTCATATCATATCTAACCATTAAATCTTCTAATGCTTTAATAAGTCGTCGA 378228 || || |||||| ||| ||| | | ||| | ||| | |||||||| || || || Sbjct 9782 TTCCTAACAGTCCCATCGTATTTGATCATAACTGATTCCATAGCTTTAATTAGACGACGT 9723 Query 378229 GAAATATAACCAGTTTGACTAGTTTTAACTGCAGTATCAATTAAACCAACACGACCACCC 378288 ||| || ||||||| |||||| |||||||| || || || || | ||||||||| Sbjct 9722 TGAATGTACCCAGTTTCGGCAGTTTTGACTGCAGTGTCTATCAAGCCTTCTCGACCACCC 9663 Query 378289 ATTGCATGGAAGAATAATTCAGTAGGAGTAAGTCCACCAATAAATGAACTCTCAATAAAT 378348 || || ||||| || |||||||| || || | ||| ||| | || | |||| || Sbjct 9662 ATAGCGTGGAAAAAAAATTCAGTGGGCGTTAAACCAGCAAGGTAGGAGTTTTCAACGAAG 9603 Query 378349 CCTCTTGCGCCTGGCGAATCATCATATTTTGTATAATGAGGTAATGTACGATTCTCAAAC 378408 || | | | || || ||||| || || |||| |||| ||||||| ||| Sbjct 9602 CCACGAGACTCAGGACCATAATCATCTTGGATAAAATGTGGTAGCGTACGATGACGAAAA 9543 Query 378409 CCATATGGAATTCGTTTTCCATCAACATTCTGTTGACCAAGTGCAGAAACCAT---TTGA 378465 || | ||||||| ||| || ||||| || |||||||| | || || | || |||| Sbjct 9542 CCGAAGGGAATTCTTTTACCTTCAACGTTTTGTTGACCCA---CACAAGCGATGACTTGA 9486 Query 378466 GCAATATTTAAATCACTACCTTTAGACCCAGCATTAACCATAAT 378509 | |||||| | | | |||||| || ||||| |||||||| Sbjct 9485 GAAATATTAATACGAGAACCTTTGGAACCAGCGACGACCATAAT 9442 Score = 95.1 bits (104), Expect = 4e-14 Identities = 377/578 (65%), Gaps = 19/578 (3%) Strand=Plus/Minus Query 379257 TTGAGGCATATGAAGATTCATTTCATCACCATCAAAATCAGCATTATATGGCTTAGTATC 379316 ||| || | ||| | ||||||||||| ||||| |||||||||||||| || |||| | Sbjct 8661 TTGTGGGAGATGTAAGTTCATTTCATCGCCATCGAAATCAGCATTATAAGGTGAAGTAAC 8602 Query 379317 TCCTACATTCATTCTAAAAGTATCACCTTGATATAAAATTTTAACAATATGACACATCAT 379376 || ||| | | ||| ||| ||| | | | | ||||||| |||||||||||| Sbjct 8601 AGATAGATTTAAACGAAACGTAG-ACCAAGGCA--AGACTTTAACACGATGACACATCAT 8545 Query 379377 TGATAATCTATGAAGTGTAGGCTGACGATTAAATAAGACACCATCCCCATCCATCATATG 379436 || | | ||||||| || || |||||||| |||| ||| || ||| | |||||| Sbjct 8544 AGACATTTTATGAAGCGTTGGTTGACGATTGAATATCACAAAGTCATCATTTAACATATG 8485 Query 379437 TCTATGTACTTTATCTCCATTTTGTAAT-TTA--ATAGATTCTCTGTCAATATACCTTAG 379493 | | || | | ||| || | | ||| || || | | ||| | || Sbjct 8484 CCGCTCAACAATGTAACCAACCTGAAGTGTTAGGTCTGAAACTTTAGGATGATATCGTAA 8425 Query 379494 AGAAATATTTTCACCCGTTTTTCTTTCTAAAATTTTTGCACCAGGATATTCATCGGGTCC 379553 | ||| || || | | | | ||| || || ||||||||||| | || ||| Sbjct 8424 ATCTATACGATCTCCATTCTCACGTACTATAAACTTAGCACCAGGATA---AAGGGTTCC 8368 Query 379554 ATT-TCTAATTAATTTTAAAAGAAACTTTTTATTATTATCATTTACTGTAACTGGTTTGG 379612 ||| | || | |||| ||| | | | | ||| | | | ||| | || | | Sbjct 8367 ATTCTGTACTAGCTTTTGCAAGTGA-TCTATGTTAAATTGAGTAACTACCTCAGGATAAG 8309 Query 379613 TTAAATTTTTTGCAATTTTCAGAGGAATACCTAATT-CTCT-AATGGATAATTGAGGATC 379670 ||| ||||| || ||| | | || | |||| || ||| ||| || |||| || || Sbjct 8308 TTAGATTTTGAGCTATTGTTCGTGGGACGCCTACTTGATCTAAATTGA-GATTG-GGGTC 8251 Query 379671 AGGTGTAATAACAGAACGAGCACTATAATCTACACGTTTACCCATAAGATTACCTCTGAC 379730 | ||| ||||||| |||||| | || ||||| || |||||||||||||||| | Sbjct 8250 GGCTGTGATAACAGTACGAGCTGAGAAGTCAACACGCTTTCCCATAAGATTACCTCGAAT 8191 Query 379731 TCGACCGGTTTTACCATTAAGTCTCTCTTTAATAGACTTTAATGGCCGACCAGATCGCTG 379790 ||||| | |||||| || |||| | ||| |||||||| | ||| || ||||| ||| Sbjct 8190 ACGACCAGCTTTACCTTTGAGTCGTTGTTTGATAGACTTCAGTGGGCGTCCAGACTTCTG 8131 Query 379791 AGCAACAGCT--GCTACCCCAGGTATTTTATTATCAAC 379826 | | | || | || ||| || | || ||||||||| Sbjct 8130 A--ATCGCCTTAGGTAACCCGGGAACTTCATTATCAAC 8095 >seq1181 Length=30581 Score = 111 bits (122), Expect = 5e-19 Identities = 374/570 (66%), Gaps = 18/570 (3%) Strand=Plus/Minus Query 223714 ATGTAATGCCTCATCTCTTGATATTAATTCATTTGAAAATGTTAATCCAGGCATTAAACC 223773 ||||| | | || ||||| ||||||||||| ||| | | ||||||||| | ||| Sbjct 9947 ATGTAGTCCTTCGTCTCTACTGATTAATTCATTGCTAAAAGACAGTCCAGGCATAAGACC 9888 Query 223774 TCTCTTTTTCATCCAAAATATTGC-GCAAAAAGCT-CCTGaaaaaaaTATACCTTCTACA 223831 || || || | ||| ||||| || || ||||| || |||||||| | |||||| || Sbjct 9887 TCGTTTCTTAAGCCAGAATATAGCTGC--GAAGCTACCAGAAAAAAAGACACCTTCCACT 9830 Query 223832 CAAGCAAACGCTACTAATCGTGTTGCAAAATTTGAATCTTTG---TCTCCTATCCATTTT 223888 ||||| || | ||| ||| ||||||| | || |||| ||||| ||||| | | Sbjct 9829 GCTGCAAAAGCAATTAAACGTTCTGCAAAAGTAGA---TTTGGAATCTCCAATCCAATCT 9773 Query 223889 AATGCCCAATCTGCTTTTTTCTTAATACAAGAAAAATTTTCTAAAGCATT--AAACAACT 223946 |||||||| | || ||||| || ||||| || || || || || | | || Sbjct 9772 AATGCCCACTGAGCCTTTTTTGCAACACAAGTTAAGTTGCTTATGGCGTTGAAGAGAAAG 9713 Query 223947 TCGATTTCTCATTATGATCACTTATATATGTTTCTATTAATTGACTATACATTATTGAAT 224006 || ||||| || || | || ||||| || |||||| | |||||| || | Sbjct 9712 TCCCTTTCT--TTGGAGTCTTTGATGTATGTATCAATTAATAAAGAGTACATTTCAGAGT 9655 Query 224007 GTATATTTTCCATTGCTATTTGAAATCCATAAAATGCTTTTGCCTCTGCTATTTGTACTT 224066 | ||||| || || ||||| || | |||||||| |||||| || || |||| Sbjct 9654 GAATATTCTCGATAGCTATCTGCATCCCATAAAAGCAACGAACCTCTGGGATCTGGACTT 9595 Query 224067 -CTGTCATAAATCTTAATCCTAAATTCTCTAATACTATACCATCACTTGCCGCAAAAAAT 224125 ||| | | || | | | | ||||| | ||| || || ||||| |||||||| || Sbjct 9594 CCTGGC-TGAAACGTTCTAGGAGGTTCTCGAGTACAATTCCGTCACTCGCCGCAAAGAAA 9536 Query 224126 GCCAATATCATA-GAAATAAAATATCTTTCATCATTGGTTAATGATAACCAGTGCGATAA 224184 || || | | || || || |||| | ||| || | | || ||| || | Sbjct 9535 GCTAACA-CGTAGGATATGAAATGACGTTCCCCAACCTTGAGCGACTCCCAATGTATGAG 9477 Query 224185 ATCTTTTGATAAATCAACTTCTTGTGCTCTCCAAAAACAATCTTCTGCTTTTTTATACAT 224244 |||||| || ||||| || |||| | |||||||| || || | || || ||||| | Sbjct 9476 ATCTTTGGACAAATCCACCTCTTCCACAGTCCAAAAAGAAGCTACAGCCTTCTTATAAAA 9417 Query 224245 TTCCCATATATCTTGGTCTTGTATCGGAAA 224274 | ||| | ||| || | || ||| || || Sbjct 9416 ATGCCAGACATCGTGATATTCTATGGGGAA 9387 >seq2578 Length=22660 Score = 102 bits (112), Expect = 2e-16 Identities = 145/203 (71%), Gaps = 6/203 (3%) Strand=Plus/Minus Query 206548 ATATTATGTATATGTAATCCAATTCCTCCTGCCCATTTTGAAATATTAGCACATTCTTTT 206607 || ||||| | || || |||||| || || || ||| || ||| | ||||||||||| Sbjct 11291 ATGTTATGGACATTTATTCCAATACCCCCGGCATTTTTAGATATAATTGCACATTCTTTC 11232 Query 206608 AATGTATTATAAATTCCATCAACACTATCACTTTCCATAGCAATTAAAAAACAAGAACTT 206667 | |||| ||||| || || | |||||| || ||||| || | ||||||| ||| Sbjct 11231 AGCGTATCGTAAATGCCTTCTATACTATCGTCTTTCATAGTGATAAGAAAACAA---CTT 11175 Query 206668 AAT---TGTGGTCGTGGCGTTCCAGCATTAAATAAAGTAGGAGTAGCATGTGTAAAATAT 206724 | |||||| || |||||||| ||||| | || || | |||||||||||| || Sbjct 11174 GAAAGCTGTGGTTTGGGAGTTCCAGCGTTAAAAAGTGTCGGTGAAGCATGTGTAAACCAT 11115 Query 206725 TTTTGAGACATTAAATTATAAGT 206747 |||| |||||| | ||||| || Sbjct 11114 TTTTCAGACATCAGGTTATACGT 11092 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1514049535519983