Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Schistosoma_20mattheei_20[genbank_20GCA_5F000951455.1_202014-09-25] 62,061 sequences; 340,818,150 total letters Query= NC_029997.1 Length=105667 Score E Sequences producing significant alignments: (Bits) Value seq21369 120 2e-22 >seq21369 Length=4562 Score = 120 bits (132), Expect = 2e-22 Identities = 149/204 (73%), Gaps = 0/204 (0%) Strand=Plus/Plus Query 23611 ATGCAGATTTTCGTTAAAACCCTCACGGGAAAAACGATCACTCTCGAAGTTGACTCCACG 23670 ||||||||||| || || || || ||||||||||| || || || |||||||| | | Sbjct 728 ATGCAGATTTTTGTGAAGACACTTACGGGAAAAACTATAACCCTAGAAGTTGAGCCTGCT 787 Query 23671 GACACTGTTGAAATATTAAAACAAAAAATTGCTGACAAAGAAGGTGTACCGCCAGATCAA 23730 || || | ||| | | || |||||| || |||||||| | || ||||| ||| Sbjct 788 GATACAATAGAAGCAGTTAAGGCGAAAATTCAAGATAAAGAAGGCATCCCACCAGACCAA 847 Query 23731 CAGCGTTTAATATTTGCCGGCAAACAACTGGAAGACGAACGCACTTTAGGCGATTACAAC 23790 || ||| |||| ||||| ||||||||||||||||| | ||| ||| | ||| || || Sbjct 848 CAACGTCTAATTTTTGCTGGCAAACAACTGGAAGATGGACGAACTCTTTCCGACTATAAT 907 Query 23791 ATACAAAAAGAGTCCACATTACAT 23814 ||||| || || || ||| | ||| Sbjct 908 ATACAGAAGGAATCAACACTTCAT 931 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 337753940206988