Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Schistosoma_20rodhaini_20[genbank_20GCA_5F000951475.1_202014-10-12] 42,069 sequences; 343,294,136 total letters Query= NC_002331.1 Length=178733 Score E Sequences producing significant alignments: (Bits) Value seq34883 89.7 6e-13 seq2471 86.0 7e-12 >seq34883 Length=823 Score = 89.7 bits (98), Expect = 6e-13 Identities = 63/72 (88%), Gaps = 0/72 (0%) Strand=Plus/Minus Query 60066 CTCCTCGGCAGGGAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATACTCACCACTA 60125 ||||||| | ||||||||||||| | || || ||||||||||||| ||||||||||||| Sbjct 769 CTCCTCGACCGGGAATCGAACCCGAGCCTTCCACGTGACAGGCGGAGATACTCACCACTA 710 Query 60126 TACTACCGAGGA 60137 ||||| |||||| Sbjct 709 TACTATCGAGGA 698 >seq2471 Length=28925 Score = 86.0 bits (94), Expect = 7e-12 Identities = 62/72 (86%), Gaps = 0/72 (0%) Strand=Plus/Plus Query 60066 CTCCTCGGCAGGGAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATACTCACCACTA 60125 ||||||| | |||||||||||| || || || ||||||||||||| ||||||||||||| Sbjct 5214 CTCCTCGACCGGGAATCGAACCTGGGCCTTCCACGTGACAGGCGGAGATACTCACCACTA 5273 Query 60126 TACTACCGAGGA 60137 ||| | |||||| Sbjct 5274 TACAATCGAGGA 5285 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 571516902567320