Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Schistosoma_20rodhaini_20[genbank_20GCA_5F000951475.1_202014-10-12] 42,069 sequences; 343,294,136 total letters Query= NC_003494.1 Length=111362 Score E Sequences producing significant alignments: (Bits) Value seq12381 98.7 7e-16 >seq12381 Length=8583 Score = 98.7 bits (108), Expect = 7e-16 Identities = 114/154 (74%), Gaps = 0/154 (0%) Strand=Plus/Minus Query 22750 GCCTTTGCGGCTGTTGAAGGCGTCATGTTTTCTGGGTCATTTGCGGCCATATTCTGGCTG 22809 || ||||| || || ||||| ||| | |||||||| ||||| || ||||||||||| Sbjct 6420 GCTTTTGCAGCAGTGGAAGGTGTCTTTTTTTCTGGTAGCTTTGCAGCTATATTCTGGCTT 6361 Query 22810 AAGAAACGTTCGCTCATGCCAGGGTTGGCGTTTTCCAACGAGTTGATTAGCCGTGACGAA 22869 |||||||| || ||||| || || | ||| ||| || || || || | |||||| Sbjct 6360 AAGAAACGAGGTCTTATGCCTGGACTGTCTTTTAGCAATGAATTAATCAGTAGAGACGAA 6301 Query 22870 GGTCTACACTGTGACTTTGCTTGTATGCTGTTTA 22903 || ||||| ||||| || |||||| | |||||| Sbjct 6300 GGACTACATTGTGATTTCGCTTGTCTATTGTTTA 6267 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 356050953355807