Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Schistosoma_20rodhaini_20[genbank_20GCA_5F000951475.1_202014-10-12] 42,069 sequences; 343,294,136 total letters Query= NC_015280.1 Length=181044 Score E Sequences producing significant alignments: (Bits) Value seq6243 102 9e-17 >seq6243 Length=16394 Score = 102 bits (112), Expect = 9e-17 Identities = 94/119 (79%), Gaps = 0/119 (0%) Strand=Plus/Plus Query 153910 TACAGACTAGAGAGCAGCATATCAGGAGAGACAAAGCAACCAGTAACATCTGCACAGCTC 153969 |||| || | || |||||||| | ||||| ||||| || ||||||||||||||||| | Sbjct 5460 TACAAACACGGGAACAGCATATTCGTAGAGATAAAGCCACAAGTAACATCTGCACAGCCC 5519 Query 153970 AGGCACTGCTGGCTAATATGTCTGGATTCTATGCAGCATATCATGGTGCAGATGGACTA 154028 | ||| | || ||||||||| ||| |||||||| | ||||||||| |||| ||| || Sbjct 5520 AAGCATTACTTGCTAATATGGCTGCTTTCTATGCTGTTTATCATGGTCCAGAAGGATTA 5578 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 578908213708960