Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Schistosoma_20rodhaini_20[genbank_20GCA_5F000951475.1_202014-10-12] 42,069 sequences; 343,294,136 total letters Query= NC_028094.1 Length=473558 Score E Sequences producing significant alignments: (Bits) Value seq11941 288 3e-72 seq24713 275 2e-68 seq35195 163 9e-35 seq1712 140 1e-27 seq12381 134 4e-26 seq13135 113 1e-19 seq16733 109 2e-18 seq11450 109 2e-18 seq3772 107 6e-18 seq16723 84.2 7e-11 seq6966 84.2 7e-11 >seq11941 Length=8966 Score = 288 bits (318), Expect = 3e-72 Identities = 468/665 (70%), Gaps = 23/665 (3%) Strand=Plus/Plus Query 349256 CGTGTAGAAATAATTGCAAATGATCAAGGTAACAGAACAACGCCATCATACGTTGCATTT 349315 || || ||||| ||||| |||||||| |||||||| | || || ||||| || ||||| Sbjct 4408 CGAGTTGAAATTATTGCGAATGATCAGGGTAACAGGATTACTCCCTCATATGTGGCATTC 4467 Query 349316 ACC---GAAACTGAGCGTATGATTGGTGATTCTGCAAAAAATCAAGCTG-CTGCTAATCC 349371 || ||| ||||| ||||||| ||| |||| ||||| || |||| | | ||||| Sbjct 4468 ACTCCGGAAGGCGAGCGACTGATTGGAGATGCTGCTAAAAACCA-GCTGACATCGAATCC 4526 Query 349372 AAAAAATACGGTTTTTGATGCTAAGCGACTTATTGGTAGAAGTTTTTCTGACAAATCTAC 349431 |||| || |||| || | ||| |||||||||| |||| || ||| |||||| Sbjct 4527 GGAAAACACAATTTTCGACGTCAAGAGACTTATTGGAAGAAAGTTCGATGA---ATCTAC 4583 Query 349432 ---ACAATCTGATCTAAAACATTTTCCTTTTACTGTTGTTCC--AAAAGACGGTGATAAA 349486 ||| ||| ||| ||||| |||||| | || ||| |||||| |||| Sbjct 4584 TGTACAGGGTGACATAACTCATTTCCCTTTTTCCGTCGTTAATAAAAAGA-----ATAAG 4638 Query 349487 CCAATTATTGAGGTTGAATATAAAGGTGAACAAAAACAATTTTTACCCGAAGAA-ATTTC 349545 || | | || ||| | | | ||| || | |||| |||| || | || || Sbjct 4639 CCGTATGTCGAAGTTCACGTTGGATCAGAAGTCAAG-ACTTTTGCCCCGGAGGAGATCTC 4697 Query 349546 ATCAATGGTTTTAGTTAAAATGAAGGAAATTGCTGAAGCATATTTAGGTGAAACAGTAAC 349605 | ||||| |||| |||||||| || |||||||||| ||| | || ||| || || Sbjct 4698 TGCTATGGTGTTAGGGAAAATGAAAGAGTTTGCTGAAGCTTATCTTGGCAAAAAGGTTAC 4757 Query 349606 TGATGCTGTTATTACTGTACCAGCCTATTTTAATGATGCCCAGCGTTCTGCAACAAAAGA 349665 | |||| ||| ||||||| ||||| |||||||| || || ||||| ||||| ||||| Sbjct 4758 TCATGCAGTTGTTACTGTTCCAGCTTATTTTAACGACGCACAGCGCCAGGCAACCAAAGA 4817 Query 349666 TGCTGGCAGCATTGCGGGGTTAAATGTTCTAAGAATGATTAATGAACCCACTGCTGCAGC 349725 |||||| | ||||| || || ||| | || | || ||||||||||| |||||||| || Sbjct 4818 TGCTGGTACAATTGCTGGTTTGAATATACTCCGGATTATTAATGAACCAACTGCTGCTGC 4877 Query 349726 AATTGCATATGGGCTTGATAAAATGAGTGACCAAGaaaaaaaTATTCTTATTTTTGATTT 349785 |||||| || || || ||||| || || || |||||||||||||| |||||| | Sbjct 4878 AATTGCTTACGGTCTAGATAA---GAAAGATGGTGAGAAAAATATTCTTATATTTGATCT 4934 Query 349786 AGGTGGTGGTACTTTTGATGTATCACTACTAACACTTGAAGAGGGAATTTTTGAAGTTAA 349845 || || |||||||| || || ||| |||| || |||| | ||| | || ||||| Sbjct 4935 TGGAGGAGGTACTTTCGACGTTTCATTACTTACGATTGAGAACGGAGTGTTCGAAGTAGT 4994 Query 349846 AGCAACTGCTGGTGATACACATCTTGGTGGAGAAGATTTTGATAATCGTCTCGTTTCGCA 349905 || || |||||| ||||||||||||||||| || ||||| | ||| | || || Sbjct 4995 TGCTACCAATGGTGACACACATCTTGGTGGAGAGGACTTTGACCAACGTGTTATTGATCA 5054 Query 349906 TTTTG 349910 ||||| Sbjct 5055 TTTTG 5059 Score = 95.1 bits (104), Expect = 4e-14 Identities = 325/509 (64%), Gaps = 20/509 (4%) Strand=Plus/Plus Query 350033 GAAATTGATTCTCTTGCTGATGGCAAAGATTTCTTTTCATCTATTACACGTGCTCGGTTT 350092 |||||||| || ||| ||||| | ||||| | | | ||||||| || ||| Sbjct 5182 GAAATTGAGTCCCTTATCGATGGTGAGGATTTTTCCGAAACACTTACACGAGCGACATTT 5241 Query 350093 GAAGAATTATGTATGGATCTTTTTAGAGCAACAATGGATCCTGTGGAAAAAGTATTAAAA 350152 || ||||| || ||| | || | ||| |||| || || ||||||| | || Sbjct 5242 GAGAAATTAAACATCGATTTATTCTTAAAAACTTTGGAACCAGTCAAAAAAGTCCTTGAA 5301 Query 350153 GATGCAAAAATGTCCAAAAATCAGATTGATGAAGTAGTTTTAGTTGGTGGTTCTACACGT 350212 ||||| ||| ||| | | || |||||| | || |||||||||||||||| | Sbjct 5302 GATGCGGGCATGAAGAAAGAGGATATCGATGAAATTATTCTAGTTGGTGGTTCTACTCAA 5361 Query 350213 ATTCCAAAAGTTCAACAGTTACTATCTGAGTTTTTTAATGGCAAAGAACCTTCTA----- 350267 || || || |||||| | | ||| | |||||||| | ||||||| | | Sbjct 5362 ATCCCTAAGGTTCAAGAACTTCTA-CGAAGTTTTTTC--GAAAAAGAACTTAACACNNNN 5418 Query 350268 ------GATCAATTAATCCAGATGAAGCTGTTGCATATGGTGCTGCTGTTCAGGCATCTA 350321 |||||||||||||||| |||||||| ||||| |||||||||| Sbjct 5419 NNNNNNNNNNNNTTAATCCAGATGAAGCAGTTGCATACGGTGCAGCTGTTCAGGGTGGCG 5478 Query 350322 TTTTATCTGGAAATAAGAGTTCTAAAATTGATGATCTATTACTACTAGATGTAACTCCAC 350381 || | ||| || || | || | | | || |||||||| ||| Sbjct 5479 TTATTGGTGGTGTGGAG------AACACTGGAGGCGTTGTGCTTTTAGATGTATGCCCAT 5532 Query 350382 TTTCGCTTGGATTAGAAACTTCTGGTGAAGTAATGACTGTTCTTATTCCTAGAAATAGTA 350441 | | | || | ||||| ||||| || ||||| |||||||| ||||||| Sbjct 5533 TGACTTTGGGTATTGAAACGGTTGGTGGTGTCATGACGAAACTTATTCCAAGAAATACAG 5592 Query 350442 CTGTACCTACAAAAAAGTCCCAAACTTTTTCTACATTTGCAGATAATCAGCCAGCGGTAA 350501 | | || || || ||||| || | ||||||||| ||| || || ||||| | || | Sbjct 5593 TTATTCCAACGAAGAAGTCTCAGATATTTTCTACAGCTGCTGACAACCAGCCGACTGTCA 5652 Query 350502 CAATTCAAGTATTTGAAGGTGAACGTGCT 350530 |||| || |||||||| |||||||| ||| Sbjct 5653 CAATACAGGTATTTGAGGGTGAACGAGCT 5681 >seq24713 Length=2438 Score = 275 bits (304), Expect = 2e-68 Identities = 481/697 (69%), Gaps = 5/697 (1%) Strand=Plus/Minus Query 349198 CGCTATAGGAATCGATTTAGGTACTACTTATTCTTGTGTTGCTGTTTGGCAAAATGATCG 349257 ||| || ||||||||| | ||||| || || || ||||||| ||||| || ||| | Sbjct 706 CGCCATTGGAATCGATCTTGGTACAACATACTCGTGTGTTGGTGTTTTCCAGCATGGTAA 647 Query 349258 TGTAGAAATAATTGCAAATGATCAAGGTAACAGAACAACGCCATCATACGTTGCATTTAC 349317 || || |||||||| ||||| || ||||||||||| || || || || || || || Sbjct 646 AGTGGAGATAATTGCCAATGACCAGGGTAACAGAACGACACCGAGTTATGTGGCGTTCAC 587 Query 349318 CGAAACTGAGCGTATGATTGGTGATTCTGCAAAAAATCAAGCTGCTGCTAATCCAAAAAA 349377 || |||||||| | ||||||||| || || || |||| || || |||| ||| Sbjct 586 AGACTCTGAGCGTTTAATTGGTGATGGAGCGAAGAACCAAGTGGCGATGAACCCAACAAA 527 Query 349378 TACGGTTTTTGATGCTAAGCGACTTATTGGTAGAAGTTTTTCTGACAAATCTACACAATC 349437 ||| || |||||||| ||||| || || ||| | | || ||| ||| || Sbjct 526 TACAGTGTTTGATGCGAAGCGTCTAATCGGTCGTCGGTTCGATGATCCATCAGTGCAGAG 467 Query 349438 TGATCTAAAACATTTTCCTTTTACTGTTGTTCCAAAAGACGGTGATAAACCAATTATTGA 349497 |||| | || |||| || ||| || || ||| ||||| || | | ||| Sbjct 466 TGATATGAAGCATTGGCCATTTGAGGTGACTC---AAGTCGGTGGGAAGCTGAAGATTTG 410 Query 349498 GGTTGAATATAAAGGTGAACAAAAACAATTTTTACCC-GAAGAAATTTCATCAATGGTTT 349556 ||||| ||||| ||||| ||||| | |||| | | ||||| ||||| |||||||| | Sbjct 409 TGTTGAGTATAAGGGTGAG-AAAAAGATGTTTTCCGCTGAAGAGATTTCGTCAATGGTGT 351 Query 349557 TAGTTAAAATGAAGGAAATTGCTGAAGCATATTTAGGTGAAACAGTAACTGATGCTGTTA 349616 | || |||||||| |||||||| ||||| || || || | ||| ||||||| Sbjct 350 TGACGAAGATGAAGGAGGTTGCTGAAAGTTATTTGGGCAGGACGGTGAGTGACGCTGTTA 291 Query 349617 TTACTGTACCAGCCTATTTTAATGATGCCCAGCGTTCTGCAACAAAAGATGCTGGCAGCA 349676 | || || || || || || ||||| || ||| ||||| |||||||| || | Sbjct 290 TAACGGTTCCTGCTTACTTCAATGACAGTCAACGTCAAGCAACGAAAGATGCAGGTGCTA 231 Query 349677 TTGCGGGGTTAAATGTTCTAAGAATGATTAATGAACCCACTGCTGCAGCAATTGCATATG 349736 | || || | ||||| | ||||| ||||| || || || ||||| |||||||| |||| Sbjct 230 TAGCTGGTCTTAATGTGTTGAGAATAATTAACGAGCCGACAGCTGCGGCAATTGCCTATG 171 Query 349737 GGCTTGATAAAATGAGTGACCAAGaaaaaaaTATTCTTATTTTTGATTTAGGTGGTGGTA 349796 | | || || | | || || ||| | | || |||||||| |||||||||| Sbjct 170 GTTTGGACAAGAAGGTTGGTGGTGAGCGTAATGTGTTGATATTTGATTTGGGTGGTGGTA 111 Query 349797 CTTTTGATGTATCACTACTAACACTTGAAGAGGGAATTTTTGAAGTTAAAGCAACTGCTG 349856 | |||||||| || | | || |||| || || || || || || || | ||||||| Sbjct 110 CATTTGATGTGTCCATCTTGACGATTGAGGATGGTATATTCGAGGTGAAGTCTACTGCTG 51 Query 349857 GTGATACACATCTTGGTGGAGAAGATTTTGATAATCG 349893 |||||||||| | || || ||||||||||| ||||| Sbjct 50 GTGATACACACTTGGGAGGTGAAGATTTTGACAATCG 14 Score = 118 bits (130), Expect = 3e-21 Identities = 92/110 (84%), Gaps = 0/110 (0%) Strand=Plus/Plus Query 183681 TCAAAATCTTCACCACCTAAATGTGTATCGCCAGCAGTAGCTTTAACTTCAAATATTCCG 183740 |||||||||||||| || || |||||||| |||||||||| || || || ||||| || Sbjct 20 TCAAAATCTTCACCTCCCAAGTGTGTATCACCAGCAGTAGACTTCACCTCGAATATACCA 79 Query 183741 TCTTCAATATTTAAAATTGATACATCAAATGTACCACCACCCAAATCAAA 183790 || ||||| | || || || ||||||||||||||||||||||||||||| Sbjct 80 TCCTCAATCGTCAAGATGGACACATCAAATGTACCACCACCCAAATCAAA 129 >seq35195 Length=800 Score = 163 bits (180), Expect = 9e-35 Identities = 350/518 (68%), Gaps = 10/518 (2%) Strand=Plus/Minus Query 349829 GGAATTTTTGAAGTTAAAGCAACTGCTGGTGATACACATCTTGGTGGAGAAGATTTTGAT 349888 || || || || || || | ||||||||||||||||| | || || ||||||||||| Sbjct 800 GGTATATTCGAGGTGAAGTCTACTGCTGGTGATACACACTTGGGAGGTGAAGATTTTGAC 741 Query 349889 AATCGTCTCGTTTCGCATTTTGTTAAAGAATTTAAGCGTCAAGCTAAAATTGATATTGG- 349947 ||||| | || || ||||| ||||| || || || | | || || | Sbjct 740 AATCGCATGGTGGATCACTTTGTGAAAGAGTTCCAGAAGAAATACAGTAAAGACATCCGT 681 Query 349948 AG--ATAATCCTAGAGCAATGCGTCGCCTAAGAACTGCGTGTGAACGTGCTAAGCGTTCC 350005 || |||| | | ||| ||||||| || || || |||||||||||||| || || | Sbjct 680 AGCAATAAGCGT---GCATTGCGTCGTCTGAGGACAGCGTGTGAACGTGCGAAACGCACA 624 Query 350006 TTATCATCTACTACCCAAACCTCTATTGAAATTGATTCTCTTGCTGATGGCAAAGATTTC 350065 || || | | |||| || | | || ||||| || | |||||| | ||||| Sbjct 623 TTGAGTTCGAGTGCCCAGACGAATCTGGAGATTGACTCGTTGTGTGATGGTATTGATTTT 564 Query 350066 TTTTCATCTATTACACGTGCTCGGTTTGAAGAATTATGTATG--GATCTTTTTAGAGCAA 350123 | | || || ||||| || ||||| || || | ||| ||||| || | | | Sbjct 563 TACACGGTGATCACTCGTGCACGATTTGAGGAGTT--GAATGCCGATCTATTCCGTGGTA 506 Query 350124 CAATGGATCCTGTGGAAAAAGTATTAAAAGATGCAAAAATGTCCAAAAATCAGATTGATG 350183 | ||||||| || || || | ||| |||||| || ||| ||| |||||| | | Sbjct 505 CGTTGGATCCCGTTGAGAAGGCTTTACGAGATGCTAAGATGGACAAGTCCCAGATTCACG 446 Query 350184 AAGTAGTTTTAGTTGGTGGTTCTACACGTATTCCAAAAGTTCAACAGTTACTATCTGAGT 350243 | |||| |||||||||||||| || ||||| || ||||| || || | || || | Sbjct 445 ACATAGTGTTAGTTGGTGGTTCCACTCGTATCCCTAAAGTGCAGAAGCTGTTACAAGACT 386 Query 350244 TTTTTAATGGCAAAGAACCTTCTAGATCAATTAATCCAGATGAAGCTGTTGCATATGGTG 350303 | || || || ||||| | ||| |||||||| ||||||||||| || ||||||| Sbjct 385 TCTTCAACGGGAAAGAGTTGAACAAATCTATTAATCCGGATGAAGCTGTGGCTTATGGTG 326 Query 350304 CTGCTGTTCAGGCATCTATTTTATCTGGAAATAAGAGT 350341 | ||||| |||||| ||||| || ||| ||||| || Sbjct 325 CAGCTGTGCAGGCAGCTATTCTAAGTGGTGATAAGTGT 288 Score = 125 bits (138), Expect = 2e-23 Identities = 342/513 (67%), Gaps = 22/513 (4%) Strand=Plus/Plus Query 183238 CACTTAAAATTGCAGCTTGAACAGCTGCACCATATGCAACAGCTTCATCTGGGTTAATTG 183297 |||||| ||| || || || |||||||||||||| || ||||||||||| || ||||| | Sbjct 299 CACTTAGAATAGCTGCCTGCACAGCTGCACCATAAGCCACAGCTTCATCCGGATTAATAG 358 Query 183298 AACGAGATAATTCTTTGCCATTAAAAAATTCTGAAAGCATTTGTTGAATTTTTGGAATTC 183357 | || ||||| || || || || ||| | || | || | ||| || || | Sbjct 359 ATTTGTTCAACTCTTTCCCGTTGAAGAAGTCTTGTAACAGCTTCTGCACTTTAGGGATAC 418 Query 183358 TAGTTGAACCACCGACTAATACTACTTCATCGATAT--TACTTTTACTAATTTGTGAATC 183415 ||| |||||||| ||||| |||| || | || | |||| | | || | | ||| Sbjct 419 GAGTGGAACCACCAACTAACACTATGTCGTGAATCTGGGACTTGTCC--ATCTTAGCATC 476 Query 183416 TTTTAAAACTTTTTCAACAGGGTCCATAGTTTTTCTAAATAAATCTATACATAACTCTTC 183475 | |||| | || ||||| || |||| || | |||| ||| | ||||| || Sbjct 477 TCGTAAAGCCTTCTCAACGGGATCCAACGTACCACGGAATAGATCGGCATTCAACTCCTC 536 Query 183476 TAATCTTGCTCTAGT--TAAAGATGaaaaaaaGTCAATACCATTATATAAGGAATCAATT 183533 |||| ||| | ||| | | || ||||| |||||||||| | | || || ||||| Sbjct 537 AAATCGTGCACGAGTGATCACCGTGTAAAAA--TCAATACCATCACACAACGAGTCAATC 594 Query 183534 TCAATCGAT--GTTTGTGTAGATGATGATAATGTTCTTTTAGCTCGTTCACATGCTGTTC 183591 || | ||| || || | | || ||||| | ||| || |||||||| ||||| | Sbjct 595 TCCA--GATTCGTCTGGGCACTCGAACTCAATGTGCGTTTCGCACGTTCACACGCTGTCC 652 Query 183592 TTAGTCGACGTAATGATCTTGGATTATCTGTA---ATATCTTGTTTATGT-TTTCTT-TT 183646 | || ||||| |||| | | |||| || || ||| || ||| |||||| | Sbjct 653 TCAGACGACGCAATGCAC---GCTTATTGCTACGGATGTCT--TTACTGTATTTCTTCTG 707 Query 183647 AAATTCAGTAATAAAATGTTGAAGTAATCTTGTATCAAAATCTTCACCACCTAAATGTGT 183706 || || | | ||| || | | | | | |||||||||||||| || || ||||| Sbjct 708 GAACTCTTTCACAAAGTGATCCACCATGCGATTGTCAAAATCTTCACCTCCCAAGTGTGT 767 Query 183707 ATCGCCAGCAGTAGCTTTAACTTCAAATATTCC 183739 ||| |||||||||| || || || ||||| || Sbjct 768 ATCACCAGCAGTAGACTTCACCTCGAATATACC 800 >seq1712 Length=34227 Score = 140 bits (154), Expect = 1e-27 Identities = 127/154 (82%), Gaps = 6/154 (4%) Strand=Plus/Minus Query 266976 GGCGATAAATTTTCTAGTCGCCACGGACAAAAAGGTACCATTGGTA--CGATTATTCCTG 267033 || |||||||| ||||||| || |||||||||||||| ||| | || |||| | | Sbjct 17840 GGTGATAAATTCGCTAGTCGACATGGACAAAAAGGTACTTGTGGAATTCG-TTAT-CGTC 17783 Query 267034 AAGAAAATATGCCATTTA-ATGAAGATGGAATTAGACCTGATATTATTATTAATCCTCAT 267092 ||||| |||||||||| | ||| || ||||||| ||| ||||||||||||||||| ||| Sbjct 17782 AAGAAGATATGCCATTCACATGT-GAAGGAATTACACCAGATATTATTATTAATCCACAT 17724 Query 267093 GCTATTCCTAGTCGTATGACAATTGGTCAATTAA 267126 |||||||||||||||||||| ||||| || |||| Sbjct 17723 GCTATTCCTAGTCGTATGACTATTGGACATTTAA 17690 Score = 134 bits (148), Expect = 4e-26 Identities = 125/159 (79%), Gaps = 0/159 (0%) Strand=Plus/Minus Query 266272 ATACTCATTGTGAAATTCATCCAAGTACATTATTAGGTATTTTAGCATCTTGTATTCCAT 266331 |||| |||||||||||||||||||||| |||||||||| | || | ||| |||| Sbjct 26762 ATACACATTGTGAAATTCATCCAAGTATGATATTAGGTATATGTGCCAGTATTATACCAT 26703 Query 266332 TTCCAGAACATAATCAAGCACCTCGTCTAACATATCAATGTGCAATGGGTAAACAGGCTA 266391 | || || ||||||||| |||| | ||||||||| |||| ||||||||||| |||| Sbjct 26702 TCCCTGATCATAATCAATCACCAAGAAATACATATCAAAGTGCTATGGGTAAACAAGCTA 26643 Query 266392 TGGGTATCTATGTTACAAATTTTAATAATAGAATGGATA 266430 ||||| | ||| ||| |||||| ||| |||||||||| Sbjct 26642 TGGGTGTGTATATTAGTAATTTTCATACAAGAATGGATA 26604 Score = 104 bits (114), Expect = 7e-17 Identities = 120/159 (75%), Gaps = 2/159 (1%) Strand=Plus/Plus Query 251155 TTCTAATAATTGTCCAATGGTCATTCTACTAGGCAATGCGTGTGGATTAATAATAATATC 251214 ||| | ||| |||||||| ||||| | |||||| | || |||||||||||||||||||| Sbjct 17685 TTCAATTAAATGTCCAATAGTCATACGACTAGGAATAGCATGTGGATTAATAATAATATC 17744 Query 251215 TGGACGAATTCCATCTTCAGTAAAAGGCATATTTTTCTCATCAATAACTAA-ACCAATAG 251273 ||| |||||| || || || |||||| | |||| | ||||| || ||| || Sbjct 17745 TGGTGTAATTCCTTCACATGTGAATGGCATA-TCTTCTTGACGATAACGAATTCCACAAG 17803 Query 251274 TACCTTTTTGTCCACATCTACTACAAAACTTATCTCCAA 251312 |||||||||||||| || |||| || ||||| |||| Sbjct 17804 TACCTTTTTGTCCATGTCGACTAGCGAATTTATCACCAA 17842 >seq12381 Length=8583 Score = 134 bits (148), Expect = 4e-26 Identities = 384/580 (66%), Gaps = 14/580 (2%) Strand=Plus/Plus Query 223714 ATGTAATGCCTCATCTCTTGATATTAATTCATTTGAAAATGTTAATCCAGGCATTAAACC 223773 ||||| | | || ||||| ||||||||||| ||| | | ||||||||| | ||| Sbjct 6292 ATGTAGTCCTTCGTCTCTACTGATTAATTCATTGCTAAAAGACAGTCCAGGCATAAGACC 6351 Query 223774 TCTCTTTTTCATCCAAAATATTGC-GCAAAAAGCT-CCTGaaaaaaaTATACCTTCTACA 223831 || || || | ||| ||||| || || |||||| || |||||||| | |||||| || Sbjct 6352 TCGTTTCTTAAGCCAGAATATAGCTGC--AAAGCTACCAGAAAAAAAGACACCTTCCACT 6409 Query 223832 CAAGCAAACGCTACTAATCGTGTTGCAAAATTTGAATCTTTGTCTCCTATCCATTTTAAT 223891 ||||| || ||||| ||| ||||||| | || | || || ||||| | |||| Sbjct 6410 GCTGCAAAAGCAACTAAGCGTTCTGCAAAAGTAGATTTAGAATCACCAATCCAATCTAAT 6469 Query 223892 GCCCAATCTGCTTTTTTCTTAATACAAGAAAAATTTTCTAAAGCATT--AAACAACTTCG 223949 ||||| | || ||||| || ||||| || || || || || | | || || Sbjct 6470 GCCCACTGAGCCTTTTTAGCAACACAAGTTAAGTTGCTTATGGCGTTGAAGAGAAAGTCC 6529 Query 223950 ATTTCTCATTATGATCACTTATATATGTTTCTATTAATTGACTATACATTATTGAATGTA 224009 ||||| ||| || | || ||||| || |||||| | |||||| || || | Sbjct 6530 CTTTCT--TTAGAGTCTTTGATGTATGTATCAATTAATAAAGAGTACATTTCAGAGTGAA 6587 Query 224010 TATTTTCCATTGCTATTTGAAATCCATAAAATGCTTTTGCCTCTGCTATTTGTACTTCTG 224069 |||| || || ||||| || | |||||| || |||||| || || |||||| Sbjct 6588 TATTCTCGATAGCTATCTGCATTCCATAGAAACAACGAACCTCTGGAATCTGGACTTCTT 6647 Query 224070 TCATAAATCTTAATCC--TAAATTCTCTAATACTATACCATCACTTGCCGCAAAAAATGC 224127 | || | | ||| | ||||| | || || || |||||||||||||| || || Sbjct 6648 GACTGAAGCGT--TCCAGGAGGTTCTCGAGGACAATGCCGTCACTTGCCGCAAAGAAGGC 6705 Query 224128 CAATATCATA-GAAATAAAATATCTTTCATCATTGGTTAATGATAACCAGTGCGATAAAT 224186 || | | || || || |||| | ||| || |||| || ||| || | || Sbjct 6706 TAACA-CGTAGGATATGAAATGACGTTCCCCAACTTTTAAAGACTCCCAATGTATGAGAT 6764 Query 224187 CTTTTGATAAATCAACTTCTTGTGCTCTCCAAAAACAATCTTCTGCTTTTTTATACATTT 224246 |||| |||||||| || |||| | |||||||| | || | || || ||||| | | Sbjct 6765 CTTTGGATAAATCCACCTCTTCCACAGTCCAAAAAGAGGCTACAGCCTTCTTATAAAAAT 6824 Query 224247 CCCATATATCTTGGTCTTGTATCGGAAACATTACAAAGCG 224286 ||| | ||| |||| || ||| || || | || ||||| Sbjct 6825 GCCAGACATCGTGGTATTCTATGGGGAAAAGGACGAAGCG 6864 >seq13135 Length=7929 Score = 113 bits (124), Expect = 1e-19 Identities = 181/257 (70%), Gaps = 10/257 (4%) Strand=Plus/Minus Query 206496 AATACCATTAGAAGTTCCATTTGTTCCTCTAATATGACTGCCAGTCCCTCTAATATTATG 206555 ||||||||| ||| |||||||||||| || | | ||| | | ||| ||||| Sbjct 6006 AATACCATTTGAATCTCCATTTGTTCCAGCTATGTAGGTCCCACGACTGCGAATGTTATG 5947 Query 206556 TATATGTAATCCAATTCCTCCTGCCCATTTTGAAATATTA--GCACATTCTTTTAATGTA 206613 | || || |||||| || || || ||||| | |||| | ||||||||||| | ||| Sbjct 5946 AACATTTAGTCCAATACCCCCGGC--ATTTTTAGATATAACTGCACATTCTTTCAGCGTA 5889 Query 206614 TTATAAATTCCATCAACACTATCACTTTCCATAGCAATTAAAAAACAA---GAACTTAAT 206670 | ||||| || || | |||||| || ||||| || | ||||||| ||| | Sbjct 5888 TCGTAAATGCCTTCTATACTATCGTCTTTCATAGTGATGAGAAAACAACTCGAA---AGC 5832 Query 206671 TGTGGTCGTGGCGTTCCAGCATTAAATAAAGTAGGAGTAGCATGTGTAAAATATTTTTGA 206730 |||||| || || ||||| ||||| | || || | |||||||||||| | |||| | Sbjct 5831 TGTGGTTTAGGAGTCCCAGCGTTAAAAAGTGTCGGTGAAGCATGTGTAAACCACTTTTCA 5772 Query 206731 GACATTAAATTATAAGT 206747 |||||||| ||||| || Sbjct 5771 GACATTAAGTTATACGT 5755 >seq16733 Length=5584 Score = 109 bits (120), Expect = 2e-18 Identities = 105/135 (78%), Gaps = 0/135 (0%) Strand=Plus/Plus Query 140508 ATACCACCACGTAATCTTAGAACAAGATGAAGAGTAGACTCTTTTTGAATATTATAATCA 140567 ||||||||||| | | || |||||||| || || || || || || ||||| || || Sbjct 3191 ATACCACCACGAAGACGAAGGACAAGATGGAGTGTTGATTCCTTCTGTATATTGTAGTCG 3250 Query 140568 GATAATGTTCGCCCATCTTCAAGTTGTTTTCCAGCAAAGATTAGACGTTGCTGATCAGGA 140627 || | ||||| |||||||| |||||||| |||||||| |||| |||||| || || || Sbjct 3251 GAAAGAGTTCGTCCATCTTCCAGTTGTTTGCCAGCAAAAATTAAACGTTGTTGGTCTGGT 3310 Query 140628 GGAATTCCTTCTTTA 140642 || || ||||||||| Sbjct 3311 GGGATGCCTTCTTTA 3325 >seq11450 Length=9373 Score = 109 bits (120), Expect = 2e-18 Identities = 208/304 (68%), Gaps = 2/304 (1%) Strand=Plus/Minus Query 349688 AATGTTCTAAGAATGATTAATGAACCCACTGCTGCAGCAATTGCATATGGGCTTGATAAA 349747 ||||| | ||||| ||||| || || || | | | |||||| | ||||| | || || Sbjct 516 AATGTGTTGAGAATCATTAACGAGCCGACAGTTTCGGCAATTACCTATGGTTTGGACAAG 457 Query 349748 ATGAGTGACCAAGaaaaaaaTATTCTTATTTTTGATTTAGGTGGTGGTACTTTTGATGTA 349807 || ||| ||| ||| || | || ||||| || | ||||||||| |||||||| Sbjct 456 ATAGTTGATGGTGAACGTAATGTTTTGATATTTGACTTGGTTGGTGGTACATTTGATGTG 397 Query 349808 TCACTACTA-ACACTTGAAGAGGGAATTTTTGAAGTTAAAGCAACTGCTGGTGATACACA 349866 || | ||| || |||| || || | || || || || | ||||||||| |||| || Sbjct 396 TCTAT-CTAGACTATTGAGGATGGTGTATTCGAGGTGAAGTCTACTGCTGGTAATACGCA 338 Query 349867 TCTTGGTGGAGAAGATTTTGATAATCGTCTCGTTTCGCATTTTGTTAAAGAATTTAAGCG 349926 |||| | ||||||||||| ||||| ||| || ||| ||||||| ||| ||| Sbjct 337 CTTTGGAAGTGAAGATTTTGACAATCGCAACGTGGATCACTTTCTTAAAGAGTTTCGGCG 278 Query 349927 TCAAGCTAAAATTGATATTGGAGATAATCCTAGAGCAATGCGTCGCCTAAGAACTGCGTG 349986 || || || ||| | |||||| | ||| ||||||| || ||||| ||||| Sbjct 277 GGAAAACAACGAAGACATTCGTGATAATAAGCGTGCATTGCGTCGTCTGAGAACAGCGTG 218 Query 349987 TGAA 349990 ||| Sbjct 217 CGAA 214 Score = 91.5 bits (100), Expect = 4e-13 Identities = 86/110 (78%), Gaps = 0/110 (0%) Strand=Plus/Plus Query 183681 TCAAAATCTTCACCACCTAAATGTGTATCGCCAGCAGTAGCTTTAACTTCAAATATTCCG 183740 ||||||||||||| || || || |||| |||||||||| || || || |||| || Sbjct 317 TCAAAATCTTCACTTCCAAAGTGCGTATTACCAGCAGTAGACTTCACCTCGAATACACCA 376 Query 183741 TCTTCAATATTTAAAATTGATACATCAAATGTACCACCACCCAAATCAAA 183790 || |||||| | | || || |||||||||||||||||| |||| ||||| Sbjct 377 TCCTCAATAGTCTAGATAGACACATCAAATGTACCACCAACCAAGTCAAA 426 >seq3772 Length=22958 Score = 107 bits (118), Expect = 6e-18 Identities = 231/344 (67%), Gaps = 6/344 (2%) Strand=Plus/Plus Query 378169 TTTCTTACAGTCATATCATATCTAACCATTAAATCTTCTAATGCTTTAATAAGTCGTCGA 378228 ||||| |||||| ||| ||| | | ||| | ||| | |||||||| || || || Sbjct 14212 TTTCTAACAGTCCCATCGTATTTGATCATAACTGATTCCATAGCTTTAATTAGACGACGC 14271 Query 378229 GAAATATAACCAGTTTGACTAGTTTTAACTGCAGTATCAATTAAACCAACACGACCACCC 378288 ||| || ||||||| ||||| |||||||| || || || || | ||||||||| Sbjct 14272 TGAATGTACCCAGTTTCGGCGGTTTTGACTGCAGTGTCTATCAAGCCTTCTCGACCACCC 14331 Query 378289 ATTGCATGGAAGAATAATTCAGTAGGAGTAAGTCCACCAATAAATGAACTCTCAATAAAT 378348 || || ||||| || |||||||| || || | ||| ||| | || | |||| || Sbjct 14332 ATAGCGTGGAAAAAAAATTCAGTGGGTGTTAAACCAGCAAGGTAGGAGTTTTCAACGAAG 14391 Query 378349 CCTCTTGCGCCTGGCGAATCATCATATTTTGTATAATGAGGTAATGTACGATTCTCAAAC 378408 || | | | || || ||| | || || |||| |||| ||||| | ||| Sbjct 14392 CCACGAGACTCAGGACCATAATCGTCTTGAATAAAATGTGGTAGCGTACGGTGACGAAAA 14451 Query 378409 CCATATGGAATTCGTTTTCCATCAACATTCTGTTGACCAAGTGCAGAAACCAT---TTGA 378465 || | ||||||| ||| || ||||| || |||||||| | || || | || |||| Sbjct 14452 CCGAAGGGAATTCTTTTACCTTCAACGTTTTGTTGACCCA---CACAAGCGATGACTTGA 14508 Query 378466 GCAATATTTAAATCACTACCTTTAGACCCAGCATTAACCATAAT 378509 | || || | | | ||||||||| |||||| |||||||| Sbjct 14509 GAGATGTTAATACGAGAACCTTTAGAACCAGCAACGACCATAAT 14552 Score = 86.0 bits (94), Expect = 2e-11 Identities = 118/163 (72%), Gaps = 4/163 (2%) Strand=Plus/Plus Query 379666 GGATCAGGTGTAATAACAGAACGAGCACTATAATCTACACGTTTACCCATAAGATTACCT 379725 ||||| | ||| ||||||| |||||| | || |||||||| ||||||||||||||| Sbjct 15790 GGATCGGCTGTGATAACAGTACGAGCTGAGAAGTCAACACGTTTTCCCATAAGATTACCT 15849 Query 379726 CTGACTCGACCGGTTTTACCATTAAGTCTCTCTTTAATAGACTTTAATGGCCGACCAGAT 379785 | | || || | |||||| || |||| | ||| |||||||| | ||| || ||||| Sbjct 15850 CGAATACGGCCAGCTTTACCTTTGAGTCGTTGTTTGATAGACTTCAGTGGGCGTCCAGAC 15909 Query 379786 CGCTGAGCAACAGCT--GCTACCCCAGGTATTTTATTATCAAC 379826 |||| | | || | || ||| || | || ||||||||| Sbjct 15910 TTCTGA--ATCGCCTTAGGTAACCCGGGAACTTCATTATCAAC 15950 >seq16723 Length=5591 Score = 84.2 bits (92), Expect = 7e-11 Identities = 181/268 (68%), Gaps = 2/268 (1%) Strand=Plus/Minus Query 68005 GGATCAAATAATATTAATTTACTAGAACCAAAAGGTCAATTTGGAACTAGATTACTTGGA 68064 |||||||||||| | ||||| ||| |||||| ||||| ||||| || || | |||| Sbjct 3125 GGATCAAATAATTTAAATTTGCTACAACCAATTGGTCAGTTTGGTACGCGACTTAGTGGA 3066 Query 68065 GGAAAAGATGCTGCATCTGAAAGATATATATTTAC-ACATCTAAATACTTTAACTAGACT 68123 || ||||||||||||||| | |||||||| || ||| |||| | | || |||| Sbjct 3065 GGTAAAGATGCTGCATCTCCTCGTTATATATTCACTGCAT-TAAACTCACTCACACGACT 3007 Query 68124 TATCTTTAGACAAGAAGATGATAATATTCTTGAATATTTAGAAGATGATGGTGATAAAGT 68183 ||| || || |||||| | | | | ||| || | |||||| | | | Sbjct 3006 TATTTTCCATTTGGAGGATGATCCTCTGTTAAATTATCTATACGATGATAATCAACGTAT 2947 Query 68184 TGAGCCAATCTATTATGTTCCTATTATTCCTATGATTTTAGTAAATGGTTCAAAAGGGAT 68243 ||| ||| | |||| ||| || ||||||||| | | || ||||| || | || || Sbjct 2946 TGAACCAGAATGGTATGCTCCAATAATTCCTATGGTCCTTGTCAATGGAGCAGATGGTAT 2887 Query 68244 TGGCACTGGATTTAGTACAGATATTATG 68271 || ||||| | | ||| ||||| || Sbjct 2886 CGGAACTGGTTATGCAACACATATTCTG 2859 >seq6966 Length=15056 Score = 84.2 bits (92), Expect = 7e-11 Identities = 87/114 (76%), Gaps = 0/114 (0%) Strand=Plus/Plus Query 140624 AGGAGGAATTCCTTCTTTATCCTGAATTTTAGCTTTTACATTATCAATCGAATCAGATGG 140683 ||| || || ||||||||||| || || || || || ||||| ||||| | ||| || Sbjct 1 AGGTGGGATCCCTTCTTTATCTTGGATCTTGGCCTTCACATTCTCAATGGTGTCACTCGG 60 Query 140684 TTCAACTTCAAGTGTAACTGTCTTTCCGGTTAGTGTTTTTACAAAAATCTGCAT 140737 |||||||| | || | |||||| || |||| |||||| ||||| |||||||| Sbjct 61 CTCAACTTCCAAAGTGATTGTCTTACCAGTTAATGTTTTCACAAATATCTGCAT 114 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1514437664146407