Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Schistosoma_20rodhaini_20[genbank_20GCA_5F000951475.1_202014-10-12] 42,069 sequences; 343,294,136 total letters Query= NC_028636.1 Length=135952 Score E Sequences producing significant alignments: (Bits) Value seq16733 87.8 2e-12 >seq16733 Length=5584 Score = 87.8 bits (96), Expect = 2e-12 Identities = 101/136 (74%), Gaps = 0/136 (0%) Strand=Plus/Minus Query 27084 AAAGAAGGCATACCACCCGATCAACAGCGTTTAATATACGCCGGCAAACAATTGGAAGAC 27143 ||||||||||| ||||| || ||||| |||||||| | || ||||||||| ||||||| Sbjct 3324 AAAGAAGGCATCCCACCAGACCAACAACGTTTAATTTTTGCTGGCAAACAACTGGAAGAT 3265 Query 27144 AGTTCGACCGTTTCCGATTACAACATTCAAAAGGAGTCGACCTTACATTTGGTTTTGCGT 27203 | || ||||||| ||||| || || ||||| || || | ||| | || | ||| Sbjct 3264 GGACGAACTCTTTCCGACTACAATATACAGAAGGAATCAACACTCCATCTTGTCCTTCGT 3205 Query 27204 TTGCGGGGTGGCATAA 27219 | || ||||| |||| Sbjct 3204 CTTCGTGGTGGTATAA 3189 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 434689692722880