Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Schistosoma_20rodhaini_20[genbank_20GCA_5F000951475.1_202014-10-12] 42,069 sequences; 343,294,136 total letters Query= NC_029997.1 Length=105667 Score E Sequences producing significant alignments: (Bits) Value seq16733 91.5 1e-13 >seq16733 Length=5584 Score = 91.5 bits (100), Expect = 1e-13 Identities = 85/108 (79%), Gaps = 0/108 (0%) Strand=Plus/Minus Query 23707 AAAGAAGGTGTACCGCCAGATCAACAGCGTTTAATATTTGCCGGCAAACAACTGGAAGAC 23766 |||||||| | || ||||| ||||| |||||||| ||||| ||||||||||||||||| Sbjct 3324 AAAGAAGGCATCCCACCAGACCAACAACGTTTAATTTTTGCTGGCAAACAACTGGAAGAT 3265 Query 23767 GAACGCACTTTAGGCGATTACAACATACAAAAAGAGTCCACATTACAT 23814 | ||| ||| | ||| ||||| ||||| || || || ||| | ||| Sbjct 3264 GGACGAACTCTTTCCGACTACAATATACAGAAGGAATCAACACTCCAT 3217 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 337836297091052