Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Schistosoma_20rodhaini_20[genbank_20GCA_5F000951475.1_202014-10-12] 42,069 sequences; 343,294,136 total letters Query= NC_033423.1 Length=208501 Score E Sequences producing significant alignments: (Bits) Value seq1712 89.7 7e-13 >seq1712 Length=34227 Score = 89.7 bits (98), Expect = 7e-13 Identities = 110/148 (74%), Gaps = 2/148 (1%) Strand=Plus/Minus Query 63747 ACCAGAAATAGGTGATAAATTTGCTTCTTTTACA-GCTCAAAAAGGTACGTGTGGTATGA 63805 |||| || | ||||||||||| ||| | ||| | ||||||||||| ||||| || Sbjct 17850 ACCACAAGTTGGTGATAAATTCGCTAGTCG-ACATGGACAAAAAGGTACTTGTGGAATTC 17792 Query 63806 TTTATCGACAAGAAGATATGCCTTTTACCAAAGACGGTATCGTACCCGATCTCGTCATCA 63865 |||||| |||||||||||||| || || || || || ||| ||| | | || | Sbjct 17791 GTTATCGTCAAGAAGATATGCCATTCACATGTGAAGGAATTACACCAGATATTATTATTA 17732 Query 63866 ATCCACACGCTTTTCCCAGTCGTATGAC 63893 ||||||| ||| |||| ||||||||||| Sbjct 17731 ATCCACATGCTATTCCTAGTCGTATGAC 17704 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 666724410167640