Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Schistosoma_20rodhaini_20[genbank_20GCA_5F000951475.1_202014-10-12] 42,069 sequences; 343,294,136 total letters Query= NC_033775.1 Length=376207 Score E Sequences producing significant alignments: (Bits) Value seq16733 96.9 8e-15 >seq16733 Length=5584 Score = 96.9 bits (106), Expect = 8e-15 Identities = 89/113 (79%), Gaps = 0/113 (0%) Strand=Plus/Minus Query 178017 AAAGAAGGAATCCCTCCGGACCAGCAACGACTTATCTTCGCCGGAAAACAGCTCGAAGAT 178076 |||||||| ||||| || ||||| ||||| | || || || || ||||| || |||||| Sbjct 3324 AAAGAAGGCATCCCACCAGACCAACAACGTTTAATTTTTGCTGGCAAACAACTGGAAGAT 3265 Query 178077 GGAAGGACTCTTGCCGATTATAACGTCCAAAAAGAATCAACACTGCATCTTGT 178129 ||| | |||||| |||| || || | || || ||||||||||| |||||||| Sbjct 3264 GGACGAACTCTTTCCGACTACAATATACAGAAGGAATCAACACTCCATCTTGT 3212 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1203082377974386