Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Schmidtea_20mediterranea_20[genbank_20GCA_5F000691995.1_202014-05- 30] 12,782 sequences; 700,725,851 total letters Query= NC_001132.2 Length=161773 Score E Sequences producing significant alignments: (Bits) Value seq2828 102 8e-17 seq2867 91.5 2e-13 >seq2828 Length=37213 Score = 102 bits (112), Expect = 8e-17 Identities = 197/281 (70%), Gaps = 16/281 (6%) Strand=Plus/Plus Query 16948 ATGTTTAAACATCAGACATGCGAAATCGCAATGTAATCCCTCGTCTCTGCTGATAAGTTC 17007 || ||||||||||| ||| || ||||||||||| | ||| || |||| ||| || | ||| Sbjct 28695 ATATTTAAACATCAAACAAGCAAAATCGCAATGAAGTCCTTCATCTCGGCTAATTAATTC 28754 Query 17008 GTT--AGAAA-ATGTCAACCCGGGCATCTTTCCTCGTTTCTTTAACCAAAATATCGCGGC 17064 ||| |||| || || |||||||| ||| || || || | ||||||||||| || Sbjct 28755 GTTGCTGAAACAT---AATCCGGGCATTAATCCACGCTTTTTAAGCCAAAATATCGATGC 28811 Query 17065 -GAACGACC-CAGAAAAGAATATACCCTCGACGGATGCAAACGCGATTAATC--GTTCGG 17120 ||| ||| | |||| ||||| |||||||| | ||||| || | | || |||| Sbjct 28812 AAAACTACCACTGAAA--AATATTCCCTCGACAGCAGCAAATGCAACAACTCTAGTTC-- 28867 Query 17121 CGTACGTCGCGTCTTTGTTACGAATCCATTTCTGCACCCACTCGGCTTTTTGCTTTATGC 17180 | | || | | ||| | | |||||| | |||| | ||||||| || | || Sbjct 28868 CAAAAGTGGATTTTTTATCGCTAATCCAACGCAATGCCCATTGAGCTTTTTTCTGAACGC 28927 Query 17181 AATCCATCGTTTCTATGGCCTTAAATAATTTCT--CTTTTT 17219 | ||| ||||| ||||| ||||||||||| | |||||| Sbjct 28928 ATGGCATAGTTTCGATGGCATTAAATAATTTATTCCTTTTT 28968 >seq2867 Length=150518 Score = 91.5 bits (100), Expect = 2e-13 Identities = 163/232 (70%), Gaps = 6/232 (3%) Strand=Plus/Plus Query 17185 CATCGTTTCTATGGCCTTAAATAATTT-CTCTTT-TTCCTGTAGGTCGATTATATACGTA 17242 ||| ||||| ||||| ||||||||||| |||||| || ||||| || || | ||| | | Sbjct 86896 CATAGTTTCGATGGCATTAAATAATTTACTCTTTGTTTCTGTA--TCAATAACATAAGAA 86953 Query 17243 TCGATGAGTAGGCTGTACATTTCGGAGTGTATGTTCTCCATGGCTATCTGAAATCCGTAA 17302 ||||| | ||| | |||||| || || ||| | || |||| || ||||| | |||| Sbjct 86954 TCGATTAATAGCGAATGCATTTCTGAATGAATGCTTTCAATGGTAATTTGAAAACTGTAA 87013 Query 17303 AA-GCATCGGGCTTCCGCTATTTGAACTTCCACGTAGAATCGTTCCGCTAGATTTTCGTT 17361 || || || | |||| | |||| ||||| |||||| || | |||||||| || Sbjct 87014 AATGCCTCAG-CTTCAGGAATTTTGACTTCTTGAAAGAATCTCTCGACAAGATTTTCATT 87072 Query 17362 CACGATGCCGTCGCTCGCGGCGAAAAACGCCAATATATGCTTAATGAAATAT 17413 | || || || || || ||||||| | | | || ||||||||||| Sbjct 87073 GTCAATCCCATCACTGGCAGCGAAAAGGGTAAGGACGTGAGTAATGAAATAT 87124 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 517462909151760