Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Schmidtea_20mediterranea_20[genbank_20GCA_5F000691995.1_202014-05- 30] 12,782 sequences; 700,725,851 total letters Query= NC_001875.2 Length=131995 Score E Sequences producing significant alignments: (Bits) Value seq4271 84.2 2e-11 >seq4271 Length=23865 Score = 84.2 bits (92), Expect = 2e-11 Identities = 141/204 (69%), Gaps = 0/204 (0%) Strand=Plus/Plus Query 20968 CCATATGCAAAGTGGACTCCTTTTGAATGTTATAGTCCGCCAGGGTTTGGGCGTCCTCCA 21027 ||| ||| | || || ||||||||||| ||||| || | || ||| || | | || | Sbjct 1771 CCAAATGGAGTGTAGATTCCTTTTGAATATTATAATCAGACAAGGTATGTCCATTTTCTA 1830 Query 21028 GCTGTTTGCCCGCATAAATAAGTCTCTGCTGGTCCACGGGCACGCCTTCCTTGTCGGCGA 21087 | |||||||| ||| |||| ||||| || || || | || | ||||| || || || Sbjct 1831 GTTGTTTGCCAGCAAAAATGAGTCTTTGTTGATCAAAAGGAATTCCTTCTTTATCTTGGA 1890 Query 21088 TCTTTTGTTTCACCTGGCCGACAGTATCACCGGGCTCCGTTTCCACGGTAATGGTCTTGC 21147 ||||| ||||||| | | || ||||| | | || | ||||| || || | Sbjct 1891 TCTTTGCTTTCACCCTTTCAATGGTGTCACCTGATGCAACCTCGAGTGTAATCGTTTTAC 1950 Query 21148 CGGTTAACGTTTTGACAAATATTT 21171 |||| || ||||| |||||||||| Sbjct 1951 CGGTCAAAGTTTTCACAAATATTT 1974 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 422193420197912