Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Schmidtea_20mediterranea_20[genbank_20GCA_5F000691995.1_202014-05- 30] 12,782 sequences; 700,725,851 total letters Query= NC_003094.2 Length=130759 Score E Sequences producing significant alignments: (Bits) Value seq10343 91.5 1e-13 >seq10343 Length=31290 Score = 91.5 bits (100), Expect = 1e-13 Identities = 157/228 (69%), Gaps = 0/228 (0%) Strand=Plus/Plus Query 24832 ATGCAGATATTTGTTAAAACCTTAACCGGCAAAACGATAACCGTCGATGTCGAATCGAGC 24891 |||||||| ||||||||||| ||||| || ||||| ||||| | || || || || Sbjct 25560 ATGCAGATCTTTGTTAAAACATTAACAGGGAAAACTATAACACTTGAAGTTGAGTCATCT 25619 Query 24892 GACAGTGTAGAAACTGTTAAGGAAAAAATTGCTGCAAAAGAAGGCGTACCGGTTGACCAG 24951 || | | |||| |||||| ||| ||| | |||||||| | || ||||| Sbjct 25620 GATTCTATTGAAAATGTTAAATCAAAGATTCAAGATAAAGAAGGAATTCCACCAGACCAA 25679 Query 24952 CAACGTTTAATATATGCGGGCAAACAACTGGAAGATTCCATGACTATGAACGATTACAGC 25011 || ||||| || | ||| ||||| ||| |||||||| ||| | ||||| | Sbjct 25680 CAGCGTTTGATTTTTGCTGGCAAGCAATTGGAAGATGGTCGTACTTTATCAGATTATAAT 25739 Query 25012 ATACAGAAAGAGGCCACGCTTCATTTAGTGTTACGATTGCGCGGAGGT 25059 || || |||||| | || | ||||| || |||||||| | |||||| Sbjct 25740 ATTCAAAAAGAGTCAACATTGCATTTGGTTTTACGATTAAGAGGAGGT 25787 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 418238836341440