Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Schmidtea_20mediterranea_20[genbank_20GCA_5F000691995.1_202014-05- 30] 12,782 sequences; 700,725,851 total letters Query= NC_003315.1 Length=31508 Score E Sequences producing significant alignments: (Bits) Value seq6794 109 1e-19 seq10086 80.6 5e-11 >seq6794 Length=1050243 Score = 109 bits (120), Expect = 1e-19 Identities = 75/85 (88%), Gaps = 0/85 (0%) Strand=Plus/Minus Query 350 AATATTATTGGTGGGTCGTGAAGGATTCGAACCTTCGACCAACGGATTAAAAGTCCGCTG 409 ||| |||||||||||| ||| ||||||||| ||||||||||||||||||||||||| Sbjct 820244 AATGTTATTGGTGGGTTGTGCGAGATTCGAACTCACGACCAACGGATTAAAAGTCCGCTG 820185 Query 410 CTCTACCGACTGAGCTAACGACCCA 434 |||||||| |||||||||| ||||| Sbjct 820184 CTCTACCGGCTGAGCTAACAACCCA 820160 >seq10086 Length=177787 Score = 80.6 bits (88), Expect = 5e-11 Identities = 65/79 (82%), Gaps = 0/79 (0%) Strand=Plus/Minus Query 357 TTGGTGGGTCGTGAAGGATTCGAACCTTCGACCAACGGATTAAAAGTCCGCTGCTCTACC 416 |||||||| || || ||||||| |||| |||||||||| |||||||||||||||| Sbjct 75612 TTGGTGGGCTCTGTGGGGGTCGAACCCACGACAAACGGATTAAGAGTCCGCTGCTCTACC 75553 Query 417 GACTGAGCTAACGACCCAA 435 |||||||||| |||||| Sbjct 75552 AACTGAGCTAAGAACCCAA 75534 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 100688714517480