Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Schmidtea_20mediterranea_20[genbank_20GCA_5F000691995.1_202014-05- 30] 12,782 sequences; 700,725,851 total letters Query= NC_005038.1 Length=99657 Score E Sequences producing significant alignments: (Bits) Value seq62 136 3e-27 seq10343 120 2e-22 seq7081 95.1 8e-15 seq12383 89.7 3e-13 seq6538 89.7 3e-13 seq4061 89.7 3e-13 seq7787 87.8 1e-12 seq3336 86.0 4e-12 seq5354 84.2 1e-11 seq7457 82.4 5e-11 seq1184 82.4 5e-11 >seq62 Length=83120 Score = 136 bits (150), Expect = 3e-27 Identities = 155/208 (75%), Gaps = 0/208 (0%) Strand=Plus/Minus Query 33166 ATGCAATGTCGACTCTTTTTGTATATTGTAATCAGACAAATTGAGTTGGTCATCCAATTG 33225 ||| ||||| || ||||| || |||||||||||||| ||| | || ||| || ||||| Sbjct 2376 ATGTAATGTGGATTCTTTCTGAATATTGTAATCAGATAAAGTTCGTCCGTCTTCTAATTG 2317 Query 33226 CTTTCCACTAAATATTAAACGTTGCTGGTCCGTGGGTATGCCTTCTTTTTCGCTAATCGC 33285 ||||| ||| || || |||||||| || | || ||||||||||| || ||| Sbjct 2316 TTTTCCGGCAAAAATCAATCGTTGCTGATCAGGAGGAATGCCTTCTTTGTCTTGAATTTT 2257 Query 33286 CTGTTTTACTGTTTGAATCGTGTCGTTGGGTTGAACGTCCAGAGTTATCGTTTTTCCCGT 33345 |||||| ||| ||| || ||| | || ||| || || ||||| ||||| ||||| Sbjct 2256 GGCTTTTACATTTTCAATTGTATCGGAAGATTCAACTTCAAGGGTTATTGTTTTACCCGT 2197 Query 33346 AAGAGTTTTTACGAAAATTTGCATGTTT 33373 |||||| || || ||||||||||||||| Sbjct 2196 AAGAGTCTTCACAAAAATTTGCATGTTT 2169 >seq10343 Length=31290 Score = 120 bits (132), Expect = 2e-22 Identities = 165/231 (71%), Gaps = 0/231 (0%) Strand=Plus/Minus Query 33142 ACCGCCTCTTAACCGCAACACCAAATGCAATGTCGACTCTTTTTGTATATTGTAATCAGA 33201 ||| |||||||| || || |||||||||||||| ||||||||||| ||||| ||||| || Sbjct 25787 ACCTCCTCTTAATCGTAAAACCAAATGCAATGTTGACTCTTTTTGAATATTATAATCTGA 25728 Query 33202 CAAATTGAGTTGGTCATCCAATTGCTTTCCACTAAATATTAAACGTTGCTGGTCCGTGGG 33261 ||| | | || ||||||||||| ||| ||| || ||||| || ||||| | || Sbjct 25727 TAAAGTACGACCATCTTCCAATTGCTTGCCAGCAAAAATCAAACGCTGTTGGTCTGGTGG 25668 Query 33262 TATGCCTTCTTTTTCGCTAATCGCCTGTTTTACTGTTTGAATCGTGTCGTTGGGTTGAAC 33321 || |||||||| || |||| ||| || ||| ||| | || | | ||| Sbjct 25667 AATTCCTTCTTTATCTTGAATCTTTGATTTAACATTTTCAATAGAATCAGATGACTCAAC 25608 Query 33322 GTCCAGAGTTATCGTTTTTCCCGTAAGAGTTTTTACGAAAATTTGCATGTT 33372 || || ||||| ||||| || || | ||||| || || || ||||| || Sbjct 25607 TTCAAGTGTTATAGTTTTCCCTGTTAATGTTTTAACAAAGATCTGCATTTT 25557 >seq7081 Length=134943 Score = 95.1 bits (104), Expect = 8e-15 Identities = 153/220 (70%), Gaps = 0/220 (0%) Strand=Plus/Plus Query 33146 CCTCTTAACCGCAACACCAAATGCAATGTCGACTCTTTTTGTATATTGTAATCAGACAAA 33205 |||||||| || || |||||||| | ||| || || ||| | ||||| |||||||||||| Sbjct 118566 CCTCTTAATCGTAAAACCAAATGGAGTGTAGATTCCTTTCGAATATTATAATCAGACAAA 118625 Query 33206 TTGAGTTGGTCATCCAATTGCTTTCCACTAAATATTAAACGTTGCTGGTCCGTGGGTATG 33265 | ||| || || ||||| || ||| ||| || | | ||| || || | || | Sbjct 118626 GTACGTTCATCTTCTAATTGTTTGCCAGCAAAAATGAGTCTTTGTTGATCTGGAGGAAAT 118685 Query 33266 CCTTCTTTTTCGCTAATCGCCTGTTTTACTGTTTGAATCGTGTCGTTGGGTTGAACGTCC 33325 |||||||| || |||| ||| || ||| ||| ||||| | | ||| || Sbjct 118686 CCTTCTTTATCTTGAATCTTTGCTTTCACCTTTTCAATAGTGTCACCTGATGCAACCTCG 118745 Query 33326 AGAGTTATCGTTTTTCCCGTAAGAGTTTTTACGAAAATTT 33365 || || |||||||| || || | |||||| | ||| |||| Sbjct 118746 AGTGTAATCGTTTTACCGGTCAAAGTTTTCATGAATATTT 118785 >seq12383 Length=19971 Score = 89.7 bits (98), Expect = 3e-13 Identities = 154/224 (69%), Gaps = 0/224 (0%) Strand=Plus/Plus Query 33142 ACCGCCTCTTAACCGCAACACCAAATGCAATGTCGACTCTTTTTGTATATTGTAATCAGA 33201 ||| |||||||| || || ||||||| | ||| || || ||||| ||||| |||||||| Sbjct 8162 ACCACCTCTTAATCGTAAACCCAAATGGAGTGTAGATTCCTTTTGAATATTATAATCAGA 8221 Query 33202 CAAATTGAGTTGGTCATCCAATTGCTTTCCACTAAATATTAAACGTTGCTGGTCCGTGGG 33261 |||| | || || || ||||| || ||| ||| || | | ||| || || | || Sbjct 8222 CAAAGTACGTCCATCTTCTAATTGTTTGCCAGCAAAAATGAGTCTTTGTTGATCGGGAGG 8281 Query 33262 TATGCCTTCTTTTTCGCTAATCGCCTGTTTTACTGTTTGAATCGTGTCGTTGGGTTGAAC 33321 | |||||||| || |||| ||| || ||| ||| ||||| | | ||| Sbjct 8282 AAATCCTTCTTTATCTTGAATCTTTGCTTTCACCTTTTCAATGGTGTCACCTGATGCAAC 8341 Query 33322 GTCCAGAGTTATCGTTTTTCCCGTAAGAGTTTTTACGAAAATTT 33365 || || || |||||||| || | | |||||| || || |||| Sbjct 8342 CTCGAGTGTAATCGTTTTACCGTTCAAAGTTTTCACAAATATTT 8385 Score = 86.0 bits (94), Expect = 4e-12 Identities = 151/219 (69%), Gaps = 1/219 (0%) Strand=Plus/Plus Query 33147 CTCTTAACCGCAACACCAAATGCAATGTCGACTCTTTTTGTATATTGTAATCAGACAAAT 33206 ||||||| || || ||||||| | ||| || || ||||| ||||| |||||||||||| Sbjct 2680 CTCTTAATCGTAAACCCAAATGGAGTGTAGATTCCTTTTGAATATTATAATCAGACAAAG 2739 Query 33207 TGAGTTGGTCATCCAATTGCTTTCCACTAAATATTAAACGTTGCTGGTCCGTGGGTATGC 33266 | || || || ||||| || ||| ||| || | | ||| || || | || || | Sbjct 2740 TACGTCCATCTTCTAATTGTTTGCCAGCAAAAATGAGTCTTTGTTGATCGGAGGAAAT-C 2798 Query 33267 CTTCTTTTTCGCTAATCGCCTGTTTTACTGTTTGAATCGTGTCGTTGGGTTGAACGTCCA 33326 ||||||| || |||| ||| || ||| ||| ||||| | | ||| || | Sbjct 2799 CTTCTTTATCTTGAATCTTTGCTTTCACCCTTTCAATTGTGTCACCTGATGCAACCTCGA 2858 Query 33327 GAGTTATCGTTTTTCCCGTAAGAGTTTTTACGAAAATTT 33365 | || |||||||| || | | |||||| || || |||| Sbjct 2859 GTGTAATCGTTTTACCGTTCAAAGTTTTCACAAATATTT 2897 >seq6538 Length=69723 Score = 89.7 bits (98), Expect = 3e-13 Identities = 154/224 (69%), Gaps = 0/224 (0%) Strand=Plus/Plus Query 33142 ACCGCCTCTTAACCGCAACACCAAATGCAATGTCGACTCTTTTTGTATATTGTAATCAGA 33201 ||| |||||| | | || ||||||| | ||| || || ||||| ||||| |||||||| Sbjct 50602 ACCACCTCTTGATTGTAAACCCAAATGGAGTGTAGATTCCTTTTGAATATTATAATCAGA 50661 Query 33202 CAAATTGAGTTGGTCATCCAATTGCTTTCCACTAAATATTAAACGTTGCTGGTCCGTGGG 33261 |||| | || || || ||||| |||||| ||| || | | ||| || || | || Sbjct 50662 CAAAGTACGTCCTTCTTCTAATTGTTTTCCAGCAAAAATGAGTCTTTGTTGATCGGGAGG 50721 Query 33262 TATGCCTTCTTTTTCGCTAATCGCCTGTTTTACTGTTTGAATCGTGTCGTTGGGTTGAAC 33321 | |||||||| || |||| ||| || ||| ||| |||||| | | || Sbjct 50722 AAATCCTTCTTTATCTTGAATCTTTGCTTTCACCTTTTTAATGGTGTCGCCTGATGCTAC 50781 Query 33322 GTCCAGAGTTATCGTTTTTCCCGTAAGAGTTTTTACGAAAATTT 33365 || || || |||||||| || | | |||||| ||||| |||| Sbjct 50782 CTCGAGTGTAATCGTTTTACCGGACAAAGTTTTCACGAATATTT 50825 >seq4061 Length=86116 Score = 89.7 bits (98), Expect = 3e-13 Identities = 154/224 (69%), Gaps = 0/224 (0%) Strand=Plus/Plus Query 33142 ACCGCCTCTTAACCGCAACACCAAATGCAATGTCGACTCTTTTTGTATATTGTAATCAGA 33201 ||| |||||||| || || ||||||| | ||| || || ||||| ||||| |||||||| Sbjct 51701 ACCACCTCTTAATCGTAAACCCAAATGGAGTGTAGATTCCTTTTGAATATTATAATCAGA 51760 Query 33202 CAAATTGAGTTGGTCATCCAATTGCTTTCCACTAAATATTAAACGTTGCTGGTCCGTGGG 33261 |||| | || || || ||||| || ||| ||| || | | ||| || || | || Sbjct 51761 CAAAGTACGTCCATCTTCTAATTGTTTGCCAGCAAAAATGAGTCTTTGTTGATCGGGAGG 51820 Query 33262 TATGCCTTCTTTTTCGCTAATCGCCTGTTTTACTGTTTGAATCGTGTCGTTGGGTTGAAC 33321 | |||||||| || |||| ||| || ||| ||| ||||| | | ||| Sbjct 51821 AAATCCTTCTTTATCTTGAATCTTTGCTTTCACCTTTTCAATGGTGTCACCTGATGCAAC 51880 Query 33322 GTCCAGAGTTATCGTTTTTCCCGTAAGAGTTTTTACGAAAATTT 33365 || || || |||||||| || | | |||||| || || |||| Sbjct 51881 CTCGAGTGTAATCGTTTTACCGTTCAAAGTTTTCACAAATATTT 51924 >seq7787 Length=20266 Score = 87.8 bits (96), Expect = 1e-12 Identities = 153/223 (69%), Gaps = 0/223 (0%) Strand=Plus/Plus Query 33143 CCGCCTCTTAACCGCAACACCAAATGCAATGTCGACTCTTTTTGTATATTGTAATCAGAC 33202 || |||||||| || || ||||||| | ||| || || ||||| ||||| ||||||||| Sbjct 11498 CCACCTCTTAATCGTAAACCCAAATGGAGTGTAGATTCCTTTTGAATATTATAATCAGAC 11557 Query 33203 AAATTGAGTTGGTCATCCAATTGCTTTCCACTAAATATTAAACGTTGCTGGTCCGTGGGT 33262 ||| | || || || ||||| || ||| ||| || | | ||| || || | || Sbjct 11558 AAAGTACGTCCATCTTCTAATTGTTTGCCAGCAAAAATGAGTCTTTGTTGATCGGGAGGA 11617 Query 33263 ATGCCTTCTTTTTCGCTAATCGCCTGTTTTACTGTTTGAATCGTGTCGTTGGGTTGAACG 33322 | |||||| | || |||| ||| ||| ||| ||| ||||| | | ||| Sbjct 11618 AATCCTTCTATATCTTGAATCTTTGCTTTCACTTTTTCAATGGTGTCACCTGATGCAACC 11677 Query 33323 TCCAGAGTTATCGTTTTTCCCGTAAGAGTTTTTACGAAAATTT 33365 || || || |||||||| || | | |||||| || || |||| Sbjct 11678 TCGAGTGTAATCGTTTTACCTTTCAAAGTTTTCACAAATATTT 11720 >seq3336 Length=143284 Score = 86.0 bits (94), Expect = 4e-12 Identities = 162/236 (69%), Gaps = 7/236 (3%) Strand=Plus/Plus Query 33142 ACCGCCTCTTAACCGCAACACCAAATGCAATGTCGACTCTTTTTGTATATTGTAATCAGA 33201 |||||||||||| | | || || || | || || ||||| || ||||| ||||| || Sbjct 129052 ACCGCCTCTTAATCATAGGACTAAGTGGAGAGTTGATTCTTTCTGAATATTATAATCGGA 129111 Query 33202 CAAATTGAGTTGGTCATCCAATTGCTTTCCACTAAATATTAAACGTTGCTGGTCCGTGGG 33261 ||| | | || || ||||||||||| ||| ||||| | ||| || || | | Sbjct 129112 TAAAGTTCGACCATCCTCTAATTGCTTTCCGGCAAAAATTAATCTTTGTTGATCAGGTAG 129171 Query 33262 TATGCCTTCTTTTTCGCTAATC---GCCTGTTTTACTGTTTGAATCGTGTCGTTGGGTTG 33318 || | |||||| || |||| |||| | | ||| || || ||| | | || Sbjct 129172 AATTC-TTCTTTGTCCTGAATCTTAGCCT---TCATATTTTCGATTGTATCGCTTGATTC 129227 Query 33319 AACGTCCAGAGTTATCGTTTTTCCCGTAAGAGTTTTTACGAAAATTTGCATGTTTA 33374 ||| |||| |||||| || || || ||||||||||| || || || ||||| |||| Sbjct 129228 AACTTCCAAAGTTATTGTCTTACCAGTAAGAGTTTTAACAAATATCTGCATTTTTA 129283 Score = 86.0 bits (94), Expect = 4e-12 Identities = 162/236 (69%), Gaps = 7/236 (3%) Strand=Plus/Plus Query 33142 ACCGCCTCTTAACCGCAACACCAAATGCAATGTCGACTCTTTTTGTATATTGTAATCAGA 33201 |||||||||||| | | || || || | || || ||||| || ||||| ||||| || Sbjct 130562 ACCGCCTCTTAATCATAGAACTAAGTGGAGAGTTGATTCTTTCTGAATATTATAATCGGA 130621 Query 33202 CAAATTGAGTTGGTCATCCAATTGCTTTCCACTAAATATTAAACGTTGCTGGTCCGTGGG 33261 ||| | | || || ||||||||||| ||| ||||| | ||| || || | | Sbjct 130622 TAAAGTTCGACCATCCTCTAATTGCTTTCCGGCAAAAATTAATCTTTGTTGATCAGGTAG 130681 Query 33262 TATGCCTTCTTTTTCGCTAATC---GCCTGTTTTACTGTTTGAATCGTGTCGTTGGGTTG 33318 || | |||||| || |||| |||| | | ||| || || ||| | | || Sbjct 130682 AATTC-TTCTTTGTCCTGAATCTTAGCCT---TCATATTTTCGATTGTATCGCTTGATTC 130737 Query 33319 AACGTCCAGAGTTATCGTTTTTCCCGTAAGAGTTTTTACGAAAATTTGCATGTTTA 33374 ||| |||| |||||| || || || ||||||||||| || || || ||||| |||| Sbjct 130738 AACTTCCAAAGTTATTGTCTTACCAGTAAGAGTTTTAACAAATATCTGCATTTTTA 130793 >seq5354 Length=17995 Score = 84.2 bits (92), Expect = 1e-11 Identities = 153/224 (68%), Gaps = 0/224 (0%) Strand=Plus/Minus Query 33142 ACCGCCTCTTAACCGCAACACCAAATGCAATGTCGACTCTTTTTGTATATTGTAATCAGA 33201 |||||||||||| || || | ||||| | ||| || || || || ||||| |||||||| Sbjct 16487 ACCGCCTCTTAATCGTAAACCGAAATGGAGTGTGGATTCCTTATGAATATTATAATCAGA 16428 Query 33202 CAAATTGAGTTGGTCATCCAATTGCTTTCCACTAAATATTAAACGTTGCTGGTCCGTGGG 33261 ||| | || || || ||||| || || | || |||| | ||| || || | || Sbjct 16427 CAAGGTATGTCCATCTTCTAATTGTTTGTCAGTGAAAATTAGTCTTTGTTGATCGGAAGG 16368 Query 33262 TATGCCTTCTTTTTCGCTAATCGCCTGTTTTACTGTTTGAATCGTGTCGTTGGGTTGAAC 33321 || |||||||| || ||| ||| || ||| ||| ||||| | | ||| Sbjct 16367 AATTCCTTCTTTATCTTGGATCTTTCCTTTCACCTTTTCAATGGTGTCACCTGATGCAAC 16308 Query 33322 GTCCAGAGTTATCGTTTTTCCCGTAAGAGTTTTTACGAAAATTT 33365 || || ||||||||||| || || | |||||| | || |||| Sbjct 16307 CTCGAGTGTTATCGTTTTACCGGTCAAAGTTTTCTCAAATATTT 16264 >seq7457 Length=83733 Score = 82.4 bits (90), Expect = 5e-11 Identities = 149/218 (68%), Gaps = 0/218 (0%) Strand=Plus/Minus Query 33148 TCTTAACCGCAACACCAAATGCAATGTCGACTCTTTTTGTATATTGTAATCAGACAAATT 33207 |||||| || | |||||||| | ||| || |||||||| ||||| |||||||||||| | Sbjct 44502 TCTTAATCGTTAAACCAAATGGAGTGTAGATTCTTTTTGAATATTATAATCAGACAAAGT 44443 Query 33208 GAGTTGGTCATCCAATTGCTTTCCACTAAATATTAAACGTTGCTGGTCCGTGGGTATGCC 33267 || || || ||||| || | | ||| || | | ||| || || | || | | Sbjct 44442 ACGTCCATCTTCTAATTGTTTGCTAGCAAAAATGAGTCTTTGTTGATCGGGAGGAAATCA 44383 Query 33268 TTCTTTTTCGCTAATCGCCTGTTTTACTGTTTGAATCGTGTCGTTGGGTTGAACGTCCAG 33327 |||||| || |||| ||| || ||| ||| ||||| | | ||| || || Sbjct 44382 TTCTTTATCTTGAATCTTTGCTTTCACCTTTTCAATGGTGTCACCTGATGCAACCTCGAG 44323 Query 33328 AGTTATCGTTTTTCCCGTAAGAGTTTTTACGAAAATTT 33365 || |||||||| || || | |||||| || || |||| Sbjct 44322 TGTAATCGTTTTACCGGTCAAAGTTTTCACAAATATTT 44285 >seq1184 Length=167935 Score = 82.4 bits (90), Expect = 5e-11 Identities = 155/227 (68%), Gaps = 6/227 (3%) Strand=Plus/Minus Query 33142 ACCGCCTCTTAACCGCAACACCAAATGCAATGTCGACTCTTTTTGTATATTGTAATCAGA 33201 ||| |||||||| || || ||||||| | ||| || || ||||| ||||| |||||||| Sbjct 91518 ACCTCCTCTTAATCGTAAACCCAAATGGAGTGTAGATTCCTTTTGAATATTATAATCAGA 91459 Query 33202 CAAATTGAGTTGGTCATCCAATTGCTTTCCACTAAATATTAAACGTTGCTGGTCCGTGGG 33261 ||| | || || || ||||| || ||| ||| || | | ||| || || | || Sbjct 91458 CAAGGTATGTCTATCTTCTAATTGTTTGCCAAAAAAAATGAGTCTTTGTTGATCGGGAGG 91399 Query 33262 TATGCCTTCT---TTTTCGCTAATCGCCTGTTTTACTGTTTGAATCGTGTCGTTGGGTTG 33318 || |||||| | || | || | || ||| || ||| ||| |||| | | Sbjct 91398 AATTCCTTCTTCATCTTGGATATTTGC---TTTCACCTTTTCAATGGTGTTACCTGATGC 91342 Query 33319 AACGTCCAGAGTTATCGTTTTTCCCGTAAGAGTTTTTACGAAAATTT 33365 ||| || || || |||||||| || || | |||||| || || |||| Sbjct 91341 AACCTCGAGTGTAATCGTTTTACCGGTCAAAGTTTTCACAAATATTT 91295 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 318727940626236