Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Schmidtea_20mediterranea_20[genbank_20GCA_5F000691995.1_202014-05- 30] 12,782 sequences; 700,725,851 total letters Query= NC_009503.1 Length=124121 Score E Sequences producing significant alignments: (Bits) Value seq62 93.3 3e-14 >seq62 Length=83120 Score = 93.3 bits (102), Expect = 3e-14 Identities = 160/228 (70%), Gaps = 7/228 (3%) Strand=Plus/Minus Query 33910 AGCCGCAGCACCAGATGAAGCGTGCTCTCCTTCTGAATGTTGTAATCTGCCAATTGTCGC 33969 || || || || ||||| | ||| || |||||||| |||||||| | || ||| Sbjct 2390 AGTCGAAGTACTAGATGTAATGTGGATTCTTTCTGAATATTGTAATCAGATAAAGTTCGT 2331 Query 33970 TCGTCGTCCAATTGCTTGCCGGCAAATATCAGGCGCTGCTGATCCACCGGCACGCTCTCT 34029 |||| || ||||| || |||||||| |||| || |||||||| || | || ||| Sbjct 2330 CCGTCTTCTAATTGTTTTCCGGCAAAAATCAATCGTTGCTGATCAGGAGGAATGCCTTCT 2271 Query 34030 TTGTCCATAATTTTTTGCTTAATGGAACTCACACT---ATCAGTAGATTCGCATTCGACC 34086 ||||| |||||| |||| | | | || | ||| | |||||| ||| | Sbjct 2270 TTGTCTTGAATTTTG-GCTT--TTACATTTTCAATTGTATCGGAAGATTCAACTTCAAGG 2214 Query 34087 GTTATTGTTTTTCCGGTTAGTGTTTTCACAAAGATTTGCAT-TTTTAA 34133 ||||||||||| || || || || |||||||| |||||||| |||||| Sbjct 2213 GTTATTGTTTTACCCGTAAGAGTCTTCACAAAAATTTGCATGTTTTAA 2166 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 397000545371164