Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Schmidtea_20mediterranea_20[genbank_20GCA_5F000691995.1_202014-05- 30] 12,782 sequences; 700,725,851 total letters Query= NC_009899.1 Length=344691 Score E Sequences producing significant alignments: (Bits) Value seq3559 89.7 1e-12 >seq3559 Length=271997 Score = 89.7 bits (98), Expect = 1e-12 Identities = 134/186 (72%), Gaps = 6/186 (3%) Strand=Plus/Minus Query 48503 GCTGTCGCGGATGCCGATGGTTCCATCGTGGGTGTTTACAGAAAGACGCATATTCCACA- 48561 || ||||| ||||||||||| || | | || |||||| | || |||||||||||| | Sbjct 121165 GCAGTCGCCGATGCCGATGGCACCGTGCTCGGCGTTTACCGTAAAACGCATATTCCAGAT 121106 Query 48562 GAGCGAATGCTACGAGGAAAAGTTTTATTTTACGCCGAGCAACAATCCGTAT--AGAGTT 48619 | || | ||||| | ||||| |||||||| || || | | | ||| || | ||| Sbjct 121105 GCGC-CAGGCTACAACGAAAAATTTTATTTCACCCCAGGTGATA--CCGGATTCAAAGTG 121049 Query 48620 TTCGAAACGAAATTCGGAAAGATGGGTGTGCTTATTTGTTGGGATCAATGGTTTTCGGAA 48679 | || || ||||| || || || || | ||||| ||||||||||||||| ||||| Sbjct 121048 TGGGACACCAAATTTGGCAAAATCGGAATAGGCATTTGCTGGGATCAATGGTTTGCGGAA 120989 Query 48680 GCGGCG 48685 ||||| Sbjct 120988 ACGGCG 120983 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1102699382031700