Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Schmidtea_20mediterranea_20[genbank_20GCA_5F000691995.1_202014-05- 30] 12,782 sequences; 700,725,851 total letters Query= NC_010191.2 Length=186713 Score E Sequences producing significant alignments: (Bits) Value seq4842 120 4e-22 >seq4842 Length=204163 Score = 120 bits (132), Expect = 4e-22 Identities = 285/426 (67%), Gaps = 6/426 (1%) Strand=Plus/Plus Query 10729 GTGGACACCCAAAATCTTCTCGCGACCGCGCACACTGGGTAGGGACACGGTGATCTTAC- 10787 ||| ||| |||||| | ||||| || || | | ||||||| ||| | | ||| | Sbjct 30223 GTGAACATTCAAAATTTGTTCGCGTCCACGAATATCAGGTAGGGTGACG-TAAACTTGCC 30281 Query 10788 GATCAAAGCGACCTGGGCGGAGGAGGGCGTCGTCAAGGATATCAATGCGGTTCGTCGCCG 10847 | ||||| || || || || || | || | ||| | |||||| ||| || || || | Sbjct 30282 GGTCAAAACGCCCCGGACGAAGCAACGCTTGGTCCAAAATATCAGGGCGATTGGTTGCGG 30341 Query 10848 CGATGACAACGATGCCCGTCTCGTTATCAAAGCCATCCATCTCAGTCAAGAGTTGATTGA 10907 | | ||| | | | | | | | |||||||||||||| ||| ||| | |||||| | Sbjct 30342 CCACGACGATCACACTGGCGTTGGTTTCAAAGCCATCCATTTCAACCAACATTTGATTCA 30401 Query 10908 TGGTTTGTTCGCGTTCATCATTCGCGGGCATACCA--CCCGCACTGCGTTGCTTACCGAC 10965 |||||||||||| |||||||| | | ||| || || | ||| || ||| || Sbjct 30402 GGGTTTGTTCGCGCTCATCATTACC--ACCGCCCAGGCCGGCTCCGCGCTGGCGACCCAC 30459 Query 10966 GGCGTCAATTTCATCGATGAAAACGATACACGGTTGATTTTCACGGGCAACTTCAAAGAT 11025 |||||||||||||| ||||||| || || ||| ||| | ||| ||||| || Sbjct 30460 CGCGTCAATTTCATCAATGAAAATAATGCAAGGTGCATTCTTTTTGGCGTTATCAAACAT 30519 Query 11026 ATCTCGGACTCTCTTGGCACCGACACCCACAAACATTTCCACAAAATTGGCGGCGGAACA 11085 ||| || || | || || |||||||| |||||||| || |||| | | ||| Sbjct 30520 ATCACGCACCCGAGACGCGCCTACACCCACGAACATTTCAACGAAATCAGAACCAGAAAT 30579 Query 11086 TTGGATGAAGGGGACGTTGGATTCACCCGCGATGGCTCGGGCGAGGAGGGTCTTCCCCGT 11145 || || || || |||| ||| ||||| || | | || || || || || ||||| Sbjct 30580 GCTGAAAAAAGGAACCTTGGCTTCGCCCGCAATCGATTTAGCAAGCAGTGTTTTACCCGT 30639 Query 11146 CCCAGG 11151 ||||| Sbjct 30640 TCCAGG 30645 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 597258157828560