Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Schmidtea_20mediterranea_20[genbank_20GCA_5F000691995.1_202014-05- 30] 12,782 sequences; 700,725,851 total letters Query= NC_010276.1 Length=156179 Score E Sequences producing significant alignments: (Bits) Value seq62 123 2e-23 seq10343 111 2e-19 seq7457 91.5 1e-13 seq7315 89.7 5e-13 seq4271 89.7 5e-13 seq7081 86.0 6e-12 seq6040 86.0 6e-12 seq2675 86.0 6e-12 seq3835 82.4 8e-11 >seq62 Length=83120 Score = 123 bits (136), Expect = 2e-23 Identities = 166/231 (72%), Gaps = 0/231 (0%) Strand=Plus/Minus Query 64216 ACCGCCGCGCAATCTAAGCACTAGATGAATCGTCGATTCTTTTTGAATGTTGTAATCTGC 64275 ||| || || | || ||| |||||||| | || |||||||| ||||| |||||||| | Sbjct 2400 ACCACCACGAAGTCGAAGTACTAGATGTAATGTGGATTCTTTCTGAATATTGTAATCAGA 2341 Query 64276 GACGGTGCGCGCGTCTTCAAGCTGCTTGCCGGCATAAATGAGCCGCTGCTGGTCGGGAGG 64335 | || || ||||||| | || || |||||| |||| | || ||||| || ||||| Sbjct 2340 TAAAGTTCGTCCGTCTTCTAATTGTTTTCCGGCAAAAATCAATCGTTGCTGATCAGGAGG 2281 Query 64336 AATTCCTTCTTTTTCTTGTATTTTTTGCTTTACAACCTCCACTGTATCACCGGCGTCCAC 64395 ||| |||||||| ||||| ||||| |||||| || | |||||| | || || Sbjct 2280 AATGCCTTCTTTGTCTTGAATTTTGGCTTTTACATTTTCAATTGTATCGGAAGATTCAAC 2221 Query 64396 TTCTACAGTTACGGTCTTGCCGGTCAAAGTTTTTACGAAAATTTGCATTTT 64446 ||| | |||| || || || || | ||| || || ||||||||||| || Sbjct 2220 TTCAAGGGTTATTGTTTTACCCGTAAGAGTCTTCACAAAAATTTGCATGTT 2170 >seq10343 Length=31290 Score = 111 bits (122), Expect = 2e-19 Identities = 148/206 (72%), Gaps = 0/206 (0%) Strand=Plus/Minus Query 64247 GTCGATTCTTTTTGAATGTTGTAATCTGCGACGGTGCGCGCGTCTTCAAGCTGCTTGCCG 64306 || || ||||||||||| || ||||||| | || || | ||||| | |||||||| Sbjct 25756 GTTGACTCTTTTTGAATATTATAATCTGATAAAGTACGACCATCTTCCAATTGCTTGCCA 25697 Query 64307 GCATAAATGAGCCGCTGCTGGTCGGGAGGAATTCCTTCTTTTTCTTGTATTTTTTGCTTT 64366 ||| |||| | ||||| ||||| || |||||||||||||| ||||| || ||| || Sbjct 25696 GCAAAAATCAAACGCTGTTGGTCTGGTGGAATTCCTTCTTTATCTTGAATCTTTGATTTA 25637 Query 64367 ACAACCTCCACTGTATCACCGGCGTCCACTTCTACAGTTACGGTCTTGCCGGTCAAAGTT 64426 ||| || | | |||| | || ||||| | |||| || || || || || ||| Sbjct 25636 ACATTTTCAATAGAATCAGATGACTCAACTTCAAGTGTTATAGTTTTCCCTGTTAATGTT 25577 Query 64427 TTTACGAAAATTTGCATTTTAATAAT 64452 || || || || |||||||||| ||| Sbjct 25576 TTAACAAAGATCTGCATTTTAAAAAT 25551 >seq7457 Length=83733 Score = 91.5 bits (100), Expect = 1e-13 Identities = 138/194 (71%), Gaps = 2/194 (1%) Strand=Plus/Minus Query 64247 GTCGATTCTTTTTGAATGTTGTAATCTGCGACGGTGCGCGCGTCTTCAAGCTGCTTGCCG 64306 || |||||||||||||| || ||||| | | || || | ||||| | || |||| Sbjct 44477 GTAGATTCTTTTTGAATATTATAATCAGACAAAGTACGTCCATCTTCTAATTGTTTGCTA 44418 Query 64307 GCATAAATGAGCCGCTGCTGGTCGGGAGGAATTCCTTCTTTTTCTTGTATTTTTTGCTTT 64366 ||| ||||||| | || || |||||||||| || |||||| ||||| | | |||||||| Sbjct 44417 GCAAAAATGAGTCTTTGTTGATCGGGAGGAAATCATTCTTTATCTTG-AATCTTTGCTTT 44359 Query 64367 -ACAACCTCCACTGTATCACCGGCGTCCACTTCTACAGTTACGGTCTTGCCGGTCAAAGT 64425 || || | || ||||| | | || || | || | || || ||||||||||| Sbjct 44358 CACCTTTTCAATGGTGTCACCTGATGCAACCTCGAGTGTAATCGTTTTACCGGTCAAAGT 44299 Query 64426 TTTTACGAAAATTT 64439 ||| || || |||| Sbjct 44298 TTTCACAAATATTT 44285 >seq7315 Length=10968 Score = 89.7 bits (98), Expect = 5e-13 Identities = 142/201 (71%), Gaps = 2/201 (1%) Strand=Plus/Plus Query 64240 ATGAATCGTCGATTCTTTTTGAATGTTGTAATCTGCGACGGTGCGCGCGTCTTCAAGCTG 64299 ||||| || |||| |||||||| | |||| | | || || | ||||| | || Sbjct 3015 ATGAAGTGTACATTCCTTTTGAATAATATAATAAGACAAAGTACGTCCTTCTTCTAATTG 3074 Query 64300 CTTGCCGGCATAAATGAGCCGCTGCTGGTCGGGAGGAATTCCTTCTTTTTCTTGTATTTT 64359 ||||| ||| ||||||| | || || |||||||||| ||||||||| ||||| || || Sbjct 3075 TTTGCCAGCAAAAATGAGTCTTTGTTGATCGGGAGGAAATCCTTCTTTATCTTGAATCTT 3134 Query 64360 TTGCTTT-ACAACCTCCACTGTATCACCGGCGTCCACTTCTACAGTTACGGTCTTGCCGG 64418 | ||||| || || | || ||||| | | || || | ||| | || || |||| Sbjct 3135 T-GCTTTCACCTTTTCAATGGTGTCACCTGATGCAACCTCGAAAGTAATCGTTTTACCGG 3193 Query 64419 TCAAAGTTTTTACGAAAATTT 64439 |||||||||| || || |||| Sbjct 3194 TCAAAGTTTTCACAAATATTT 3214 >seq4271 Length=23865 Score = 89.7 bits (98), Expect = 5e-13 Identities = 139/195 (71%), Gaps = 4/195 (2%) Strand=Plus/Plus Query 64247 GTCGATTCTTTTTGAATGTTGTAATCTGCGACGGTGCGCGCGTCTTCAAGCTGCTTGCCG 64306 || ||||| |||||||| || ||||| | | ||| | | | ||| || || ||||| Sbjct 1782 GTAGATTCCTTTTGAATATTATAATCAGACAAGGTATGTCCATTTTCTAGTTGTTTGCCA 1841 Query 64307 GCATAAATGAGCCGCTGCTGGTCGGGAGGAATTCCTTCTTTTTCTTGTATTTTTTGCTTT 64366 ||| ||||||| | || || || ||||||||||||||| ||||| | | |||||||| Sbjct 1842 GCAAAAATGAGTCTTTGTTGATCAAAAGGAATTCCTTCTTTATCTTGGA-TCTTTGCTTT 1900 Query 64367 ACAACC--TCCACTGTATCACCGGCGTCCACTTCTACAGTTACGGTCTTGCCGGTCAAAG 64424 || || || | || ||||| | | || || | || | || || |||||||||| Sbjct 1901 -CACCCTTTCAATGGTGTCACCTGATGCAACCTCGAGTGTAATCGTTTTACCGGTCAAAG 1959 Query 64425 TTTTTACGAAAATTT 64439 |||| || || |||| Sbjct 1960 TTTTCACAAATATTT 1974 >seq7081 Length=134943 Score = 86.0 bits (94), Expect = 6e-12 Identities = 137/194 (71%), Gaps = 2/194 (1%) Strand=Plus/Plus Query 64247 GTCGATTCTTTTTGAATGTTGTAATCTGCGACGGTGCGCGCGTCTTCAAGCTGCTTGCCG 64306 || ||||| ||| |||| || ||||| | | || || | ||||| | || ||||| Sbjct 118593 GTAGATTCCTTTCGAATATTATAATCAGACAAAGTACGTTCATCTTCTAATTGTTTGCCA 118652 Query 64307 GCATAAATGAGCCGCTGCTGGTCGGGAGGAATTCCTTCTTTTTCTTGTATTTTTTGCTTT 64366 ||| ||||||| | || || || ||||||| ||||||||| ||||| || ||| ||||| Sbjct 118653 GCAAAAATGAGTCTTTGTTGATCTGGAGGAAATCCTTCTTTATCTTGAATCTTT-GCTTT 118711 Query 64367 -ACAACCTCCACTGTATCACCGGCGTCCACTTCTACAGTTACGGTCTTGCCGGTCAAAGT 64425 || || | || ||||| | | || || | || | || || ||||||||||| Sbjct 118712 CACCTTTTCAATAGTGTCACCTGATGCAACCTCGAGTGTAATCGTTTTACCGGTCAAAGT 118771 Query 64426 TTTTACGAAAATTT 64439 ||| | ||| |||| Sbjct 118772 TTTCATGAATATTT 118785 >seq6040 Length=121922 Score = 86.0 bits (94), Expect = 6e-12 Identities = 137/194 (71%), Gaps = 2/194 (1%) Strand=Plus/Plus Query 64247 GTCGATTCTTTTTGAATGTTGTAATCTGCGACGGTGCGCGCGTCTTCAAGCTGCTTGCCG 64306 || ||||||||||||||||| ||||| | | || || | ||||| | || ||||| Sbjct 23274 GTAGATTCTTTTTGAATGTTATAATCAGACAAAGTACGTCCATCTTCTAATTGTTTGCCA 23333 Query 64307 GCATAAATGAGCCGCTGCTGGTCGGGAGGAATTCCTTCTTTTTCTTGTATTTTTTGCTTT 64366 ||| ||||||| | || || | |||||||| ||||| ||| ||||| | | |||||||| Sbjct 23334 GCAAAAATGAGTCTTTGTTGATAGGGAGGAAATCCTTTTTTATCTTG-AATCTTTGCTTT 23392 Query 64367 -ACAACCTCCACTGTATCACCGGCGTCCACTTCTACAGTTACGGTCTTGCCGGTCAAAGT 64425 || || | || ||||| | | || || | || | || || ||| |||||| Sbjct 23393 CACCTTTTCAATGGTGTCACCTGATGCAACCTCGAGTGTAATCGTTTTACCGTCCAAAGT 23452 Query 64426 TTTTACGAAAATTT 64439 ||| || || |||| Sbjct 23453 TTTCACAAATATTT 23466 >seq2675 Length=43220 Score = 86.0 bits (94), Expect = 6e-12 Identities = 139/195 (71%), Gaps = 4/195 (2%) Strand=Plus/Minus Query 64247 GTCGATTCTTTTTGAATGTTGTAATCTGCGACGGTGCGCGCGTCTTCAAGCTGCTTGCCG 64306 || ||||| |||||||| || ||||| | | || || | ||||| | || ||||| Sbjct 42651 GTAGATTCCTTTTGAATATTATAATCAGAAAACGTACGTCCATCTTCTAATTGTTTGCCA 42592 Query 64307 GCATAAATGAGCCGCTGCTGGTCGGGAGGAATTCCTTCTTTTTCTTGTATTTTTTGCTTT 64366 ||| ||||||| | | || | |||||||| | ||||||| ||||| || ||| ||||| Sbjct 42591 GCAAAAATGAGTCTTTATTGATTGGGAGGAAATTCTTCTTTATCTTGAATCTTT-GCTTT 42533 Query 64367 ACAACCTC-CACTGTA-TCACCGGCGTCCACTTCTACAGTTACGGTCTTGCCGGTCAAAG 64424 || | | || ||| ||||| | | || || | || | || || |||||||||| Sbjct 42532 -CACCTTTTCAATGTTGTCACCTGATGCAACCTCGAGTGTAATTGTTTTACCGGTCAAAG 42474 Query 64425 TTTTTACGAAAATTT 64439 |||| ||||| |||| Sbjct 42473 TTTTCACGAATATTT 42459 >seq3835 Length=151197 Score = 82.4 bits (90), Expect = 8e-11 Identities = 91/120 (76%), Gaps = 1/120 (1%) Strand=Plus/Plus Query 64247 GTCGATTCTTTTTGAATGTTGTAATCTGCGACGGTGCGCGCGTCTTCAAGCTGCTTGCCG 64306 || ||||| |||||||| || ||||| | | ||| | | ||||| | || ||||| Sbjct 8629 GTAGATTCCTTTTGAATATTATAATCAGACAAGGTATGTCCATCTTCTAATTGTTTGCCA 8688 Query 64307 GCATAAATGAGCCGCTGCTGGTCGGGAGGAATTCCTTCTTTTTCTTGTATTTTTTGCTTT 64366 | | ||||||| | || || |||||||||||||||||||| ||||| | | |||||||| Sbjct 8689 GTAAAAATGAGTCTTTGTTGATCGGGAGGAATTCCTTCTTTATCTTGGA-TCTTTGCTTT 8747 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 499564969252080