Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Schmidtea_20mediterranea_20[genbank_20GCA_5F000691995.1_202014-05- 30] 12,782 sequences; 700,725,851 total letters Query= NC_013797.1 Length=108592 Score E Sequences producing significant alignments: (Bits) Value seq62 104 2e-17 seq9680 98.7 7e-16 >seq62 Length=83120 Score = 104 bits (114), Expect = 2e-17 Identities = 153/217 (71%), Gaps = 0/217 (0%) Strand=Plus/Minus Query 39505 CGCAGTACCAAATGCAAAGTGCTTTCTTTTTGTATATTATAATCGGCCAAAACGCGTTCA 39564 || ||||| | ||| || ||| |||||| || ||||| ||||| | ||| ||| | Sbjct 2387 CGAAGTACTAGATGTAATGTGGATTCTTTCTGAATATTGTAATCAGATAAAGTTCGTCCG 2328 Query 39565 TCGTCCAATTGTTTCCCGCCAAAAATTAAACGCTGCTGATCCGAGGGTACGCCTTCTTTG 39624 || || |||||||| ||| ||||||| || || |||||||| | || | |||||||||| Sbjct 2327 TCTTCTAATTGTTTTCCGGCAAAAATCAATCGTTGCTGATCAGGAGGAATGCCTTCTTTG 2268 Query 39625 TCGCATATTTTTTGTTTAATCGTCGCTACTGTGTCTGCGCTTTCCACGTCCAAAGTAATT 39684 || ||||| ||| | | | | ||| || | ||| || || | || ||| Sbjct 2267 TCTTGAATTTTGGCTTTTACATTTTCAATTGTATCGGAAGATTCAACTTCAAGGGTTATT 2208 Query 39685 GTTTTACCCGTTAAAGTTTTTACGAAGATCTGCATGT 39721 ||||||||||| | ||| || || || || ||||||| Sbjct 2207 GTTTTACCCGTAAGAGTCTTCACAAAAATTTGCATGT 2171 >seq9680 Length=90248 Score = 98.7 bits (108), Expect = 7e-16 Identities = 149/212 (70%), Gaps = 0/212 (0%) Strand=Plus/Plus Query 39508 AGTACCAAATGCAAAGTGCTTTCTTTTTGTATATTATAATCGGCCAAAACGCGTTCATCG 39567 ||||||||||| | ||| ||||||||||| || || || || | ||| || |||| Sbjct 41732 AGTACCAAATGGAGAGTACTTTCTTTTTGGATGTTGTAGTCAGACAATGTTCGACCATCT 41791 Query 39568 TCCAATTGTTTCCCGCCAAAAATTAAACGCTGCTGATCCGAGGGTACGCCTTCTTTGTCG 39627 || |||||||| || | || |||| | ||| ||||| | || | |||||| ||||| Sbjct 41792 TCTAATTGTTTTCCAGCGAAGATTAGTCTCTGTTGATCTGGTGGAATGCCTTCCTTGTCT 41851 Query 39628 CATATTTTTTGTTTAATCGTCGCTACTGTGTCTGCGCTTTCCACGTCCAAAGTAATTGTT 39687 ||||| ||||| | | | || |||| || || || | ||||||||| Sbjct 41852 TGAATTTTGGCTTTAACATTTTCAATGGTATCTGAAGACTCAACTTCAAGTGTAATTGTT 41911 Query 39688 TTACCCGTTAAAGTTTTTACGAAGATCTGCAT 39719 |||||||||| ||||| || || |||||||| Sbjct 41912 TTACCCGTTAGGGTTTTAACAAAAATCTGCAT 41943 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 347315486546606