Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Schmidtea_20mediterranea_20[genbank_20GCA_5F000691995.1_202014-05- 30] 12,782 sequences; 700,725,851 total letters Query= NC_015280.1 Length=181044 Score E Sequences producing significant alignments: (Bits) Value seq7769 107 2e-18 >seq7769 Length=98353 Score = 107 bits (118), Expect = 2e-18 Identities = 114/149 (77%), Gaps = 1/149 (1%) Strand=Plus/Minus Query 153880 GTGAA-GGTAATAAAGCATACAGATTAGCACTACAGACTAGAGAGCAGCATATCAGGAGA 153938 ||||| ||||| ||||||| || | || |||| || ||||| ||||||||||| ||| Sbjct 39576 GTGAATGGTAACCCAGCATACCGACTTGCCTTACAAACGAGAGAACAGCATATCAGAAGA 39517 Query 153939 GACAAAGCAACCAGTAACATCTGCACAGCTCAGGCACTGCTGGCTAATATGTCTGGATTC 153998 || ||||| || ||||| || || || ||||| ||||| | || |||||||||| | | Sbjct 39516 GATAAAGCGACAAGTAATATTTGTACTGCTCAAGCACTTTTAGCAAATATGTCTGCAATG 39457 Query 153999 TATGCAGCATATCATGGTGCAGATGGACT 154027 ||||| | ||||||||| | || || || Sbjct 39456 TATGCTGTTTATCATGGTCCCGAAGGCCT 39428 Score = 107 bits (118), Expect = 2e-18 Identities = 114/149 (77%), Gaps = 1/149 (1%) Strand=Plus/Minus Query 153880 GTGAA-GGTAATAAAGCATACAGATTAGCACTACAGACTAGAGAGCAGCATATCAGGAGA 153938 ||||| ||||| ||||||| || | || |||| || ||||| ||||||||||| ||| Sbjct 41383 GTGAATGGTAACCCAGCATACCGACTTGCCTTACAAACGAGAGAACAGCATATCAGAAGA 41324 Query 153939 GACAAAGCAACCAGTAACATCTGCACAGCTCAGGCACTGCTGGCTAATATGTCTGGATTC 153998 || ||||| || ||||| || || || ||||| ||||| | || |||||||||| | | Sbjct 41323 GATAAAGCGACAAGTAATATTTGTACTGCTCAAGCACTTTTAGCAAATATGTCTGCAATG 41264 Query 153999 TATGCAGCATATCATGGTGCAGATGGACT 154027 ||||| | ||||||||| | || || || Sbjct 41263 TATGCTGTTTATCATGGTCCCGAAGGCCT 41235 Score = 107 bits (118), Expect = 2e-18 Identities = 114/149 (77%), Gaps = 1/149 (1%) Strand=Plus/Minus Query 153880 GTGAA-GGTAATAAAGCATACAGATTAGCACTACAGACTAGAGAGCAGCATATCAGGAGA 153938 ||||| ||||| ||||||| || | || |||| || ||||| ||||||||||| ||| Sbjct 43893 GTGAATGGTAACCCAGCATACCGACTTGCCTTACAAACGAGAGAACAGCATATCAGAAGA 43834 Query 153939 GACAAAGCAACCAGTAACATCTGCACAGCTCAGGCACTGCTGGCTAATATGTCTGGATTC 153998 || ||||| || ||||| || || || ||||| ||||| | || |||||||||| | | Sbjct 43833 GATAAAGCGACAAGTAATATTTGTACTGCTCAAGCACTTTTAGCAAATATGTCTGCAATG 43774 Query 153999 TATGCAGCATATCATGGTGCAGATGGACT 154027 ||||| | ||||||||| | || || || Sbjct 43773 TATGCTGTTTATCATGGTCCCGAAGGCCT 43745 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 579120256274880