Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Schmidtea_20mediterranea_20[genbank_20GCA_5F000691995.1_202014-05-
30] 12,782 sequences; 700,725,851 total letters
Query= NC_015284.1
Length=183806
Score E
Sequences producing significant alignments: (Bits) Value
seq7769 105 8e-18
seq2587 84.2 3e-11
>seq7769
Length=98353
Score = 105 bits (116), Expect = 8e-18
Identities = 109/143 (76%), Gaps = 0/143 (0%)
Strand=Plus/Minus
Query 158560 GGTAATAAAGCATACAGATTAGCACTACAGACTAGAGAGCAGCATATCAGAAGAGACAAA 158619
||||| ||||||| || | || |||| || ||||| ||||||||||||||||| |||
Sbjct 39570 GGTAACCCAGCATACCGACTTGCCTTACAAACGAGAGAACAGCATATCAGAAGAGATAAA 39511
Query 158620 GCAACCAGTAACATCTGCACAGCACAAGCACTGCTGGCTAATATGTCTGGGTTCTATGCA 158679
|| || ||||| || || || || |||||||| | || |||||||||| | |||||
Sbjct 39510 GCGACAAGTAATATTTGTACTGCTCAAGCACTTTTAGCAAATATGTCTGCAATGTATGCT 39451
Query 158680 GCATATCATGGTGCAGATGGACT 158702
| ||||||||| | || || ||
Sbjct 39450 GTTTATCATGGTCCCGAAGGCCT 39428
Score = 105 bits (116), Expect = 8e-18
Identities = 109/143 (76%), Gaps = 0/143 (0%)
Strand=Plus/Minus
Query 158560 GGTAATAAAGCATACAGATTAGCACTACAGACTAGAGAGCAGCATATCAGAAGAGACAAA 158619
||||| ||||||| || | || |||| || ||||| ||||||||||||||||| |||
Sbjct 41377 GGTAACCCAGCATACCGACTTGCCTTACAAACGAGAGAACAGCATATCAGAAGAGATAAA 41318
Query 158620 GCAACCAGTAACATCTGCACAGCACAAGCACTGCTGGCTAATATGTCTGGGTTCTATGCA 158679
|| || ||||| || || || || |||||||| | || |||||||||| | |||||
Sbjct 41317 GCGACAAGTAATATTTGTACTGCTCAAGCACTTTTAGCAAATATGTCTGCAATGTATGCT 41258
Query 158680 GCATATCATGGTGCAGATGGACT 158702
| ||||||||| | || || ||
Sbjct 41257 GTTTATCATGGTCCCGAAGGCCT 41235
Score = 105 bits (116), Expect = 8e-18
Identities = 109/143 (76%), Gaps = 0/143 (0%)
Strand=Plus/Minus
Query 158560 GGTAATAAAGCATACAGATTAGCACTACAGACTAGAGAGCAGCATATCAGAAGAGACAAA 158619
||||| ||||||| || | || |||| || ||||| ||||||||||||||||| |||
Sbjct 43887 GGTAACCCAGCATACCGACTTGCCTTACAAACGAGAGAACAGCATATCAGAAGAGATAAA 43828
Query 158620 GCAACCAGTAACATCTGCACAGCACAAGCACTGCTGGCTAATATGTCTGGGTTCTATGCA 158679
|| || ||||| || || || || |||||||| | || |||||||||| | |||||
Sbjct 43827 GCGACAAGTAATATTTGTACTGCTCAAGCACTTTTAGCAAATATGTCTGCAATGTATGCT 43768
Query 158680 GCATATCATGGTGCAGATGGACT 158702
| ||||||||| | || || ||
Sbjct 43767 GTTTATCATGGTCCCGAAGGCCT 43745
>seq2587
Length=234350
Score = 84.2 bits (92), Expect = 3e-11
Identities = 105/144 (73%), Gaps = 0/144 (0%)
Strand=Plus/Plus
Query 157881 TATAGGTCAAGGATACTATGGAACCATCACACCCCCAGTCATACAGCGAAACGTTCTTGA 157940
||| || ||||| || || || ||| || ||| | || || ||| || || |||||
Sbjct 90197 TATTGGCCAAGGTTATTACGGTACCTACATACCGTCGGTGATTTTGCGCAATGTGCTTGA 90256
Query 157941 GAATCCTAGTTGGTACACATCTTACACTCCCTATCAAGCTGAGATATCTCAGGGAAGATT 158000
|||||| |||||| || | ||||| || || |||||||| || || || || |||||
Sbjct 90257 AAATCCTGCTTGGTATACGGCGTACACCCCGTACCAAGCTGAAATTTCACAAGGCAGATT 90316
Query 158001 GGAAGCTTTATTCAATTACCAAAC 158024
|||||| | || |||| ||||||
Sbjct 90317 GGAAGCACTTTTGAATTTCCAAAC 90340
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 587957244119520
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |