Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Schmidtea_20mediterranea_20[genbank_20GCA_5F000691995.1_202014-05- 30] 12,782 sequences; 700,725,851 total letters Query= NC_015398.1 Length=101487 Score E Sequences producing significant alignments: (Bits) Value seq62 96.9 2e-15 seq10343 82.4 5e-11 >seq62 Length=83120 Score = 96.9 bits (106), Expect = 2e-15 Identities = 142/201 (71%), Gaps = 0/201 (0%) Strand=Plus/Minus Query 34784 TGTGCTTTCTTTCTGAATGTTATAGTCCGAAAGGCTTCGTTCATCATCCAGCTGTTTTCC 34843 |||| |||||||||||| || || || || | ||||| | || || | |||||||| Sbjct 2370 TGTGGATTCTTTCTGAATATTGTAATCAGATAAAGTTCGTCCGTCTTCTAATTGTTTTCC 2311 Query 34844 GGCAAATATTAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGCTAATCTTCTGTTT 34903 |||||| || | ||||||||| || | || | || || ||||| ||| || ||| Sbjct 2310 GGCAAAAATCAATCGTTGCTGATCAGGAGGAATGCCTTCTTTGTCTTGAATTTTGGCTTT 2251 Query 34904 GACGGATGCTATCGATTCACCGGCCTCAACATCGACGGTTATGGTTTTTCCCGTGAGAGT 34963 || | | || | || | ||||| || | |||||| ||||| ||||| ||||| Sbjct 2250 TACATTTTCAATTGTATCGGAAGATTCAACTTCAAGGGTTATTGTTTTACCCGTAAGAGT 2191 Query 34964 CTTCACAAAGATCTGCATATT 34984 ||||||||| || ||||| || Sbjct 2190 CTTCACAAAAATTTGCATGTT 2170 >seq10343 Length=31290 Score = 82.4 bits (90), Expect = 5e-11 Identities = 156/230 (68%), Gaps = 0/230 (0%) Strand=Plus/Minus Query 34755 CCTCCCCTCAACCTCAAAACCAAGTGAATTGTGCTTTCTTTCTGAATGTTATAGTCCGAA 34814 ||||| || || | |||||||| || | ||| ||||| ||||| ||||| || || Sbjct 25786 CCTCCTCTTAATCGTAAAACCAAATGCAATGTTGACTCTTTTTGAATATTATAATCTGAT 25727 Query 34815 AGGCTTCGTTCATCATCCAGCTGTTTTCCGGCAAATATTAGTCGTTGCTGGTCTTGCGGC 34874 | | || |||| |||| || || || ||||| || | || || |||||| | || Sbjct 25726 AAAGTACGACCATCTTCCAATTGCTTGCCAGCAAAAATCAAACGCTGTTGGTCTGGTGGA 25667 Query 34875 ACCCCCTCCTTGTCGCTAATCTTCTGTTTGACGGATGCTATCGATTCACCGGCCTCAACA 34934 | || || || || |||||| ||| || | | || || ||| | |||||| Sbjct 25666 ATTCCTTCTTTATCTTGAATCTTTGATTTAACATTTTCAATAGAATCAGATGACTCAACT 25607 Query 34935 TCGACGGTTATGGTTTTTCCCGTGAGAGTCTTCACAAAGATCTGCATATT 34984 || | ||||| ||||| || || | || || |||||||||||||| || Sbjct 25606 TCAAGTGTTATAGTTTTCCCTGTTAATGTTTTAACAAAGATCTGCATTTT 25557 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 324583028374896