Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Schmidtea_20mediterranea_20[genbank_20GCA_5F000691995.1_202014-05- 30] 12,782 sequences; 700,725,851 total letters Query= NC_020842.1 Length=79114 Score E Sequences producing significant alignments: (Bits) Value seq4321 167 1e-36 >seq4321 Length=90450 Score = 167 bits (184), Expect = 1e-36 Identities = 296/429 (69%), Gaps = 6/429 (1%) Strand=Plus/Plus Query 25933 CATAAATAAATCTGGAATCCACATTGCATAAAATAAATCTCTCGCTCTCATTTC--TTCT 25990 ||| ||||||||||||||||||| || ||||||||||||| ||| | |||| ||| Sbjct 81686 CATGAATAAATCTGGAATCCACAAAGCGCAAAATAAATCTCTAGCTTT--TTTCGATTCA 81743 Query 25991 TTTCCGTGATTCTTTTTTAGATCTAAGAAATCAAAAATATCTGAGTGCCATGGTTCTAAA 26050 | |||||| || || | || || || || || || || || |||||||| || | | Sbjct 81744 TCTCCGTGGTTTTTACGCAATTCCAAAAATTCCAATATGTCAGAATGCCATGGCTCAATA 81803 Query 26051 TAGATAGCAAAACTACCTTTTCTTTTTCCTCCACCTTGATCTACGTATCTTGCAGTTTCA 26110 || || || || ||| || || ||||||||| || ||||| | || | | | Sbjct 81804 TAAATGGCGAATGCACCGGGTCGCTTATTTCCACCTTGGTCGACGTAACGAGCTGCATAA 81863 Query 26111 TTGAAAACTTTCAACATTGGAACTAATCCAGTTGAAAATCCGTTTGTGCTATGAATCTTG 26170 || || || | | ||||||| ||||||| | || | || ||||| | || || Sbjct 81864 TTAAATACCTGGAGCATTGGAGTTAATCCATTCGATACACCATTTGTTCCATTGATTGGT 81923 Query 26171 GATCCTGTCGATCTAATATCGTGAGCATGAATACCGATTCCACCAGCCCATTTTGAAATA 26230 ||||| |||| ||||||| ||| ||| | |||||| |||||||| |||| |||||| Sbjct 81924 GATCCAGTCGCTCTAATACAATGAACATTTAAACCGATACCACCAGCATATTTAGAAATA 81983 Query 26231 GCTGCACAATCTGAAACTGTATCGAAAATTCCTTTTATGCTATCACCTTTCATTCCTAAT 26290 ||||| ||| || ||| || ||||| | || || ||| |||||||| |||| Sbjct 81984 AGAGCACATTCTTTAAGAGTACTAAATATTCCATCAATACTGTCATCTTTCATTGTTAAT 82043 Query 26291 AAAAAACAAGAAGATAATTGCGAATGAGTTGTTCCTGAATTAAATAATGTCGGTGTAGCA 26350 | |||||| ||| | ||| || || || | |||||||||||| || | ||| Sbjct 82044 AGGAAACAACTAGAGAGTTGACCATACTTTAACCCAGCATTAAATAATGTTGGAGAAGC- 82102 Query 26351 TGAGTATAA 26359 | |||||| Sbjct 82103 -GTGTATAA 82110 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 253000581270650