Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Schmidtea_20mediterranea_20[genbank_20GCA_5F000691995.1_202014-05- 30] 12,782 sequences; 700,725,851 total letters Query= NC_020852.1 Length=186468 Score E Sequences producing significant alignments: (Bits) Value seq4321 98.7 1e-15 seq2828 87.8 2e-12 >seq4321 Length=90450 Score = 98.7 bits (108), Expect = 1e-15 Identities = 140/197 (71%), Gaps = 0/197 (0%) Strand=Plus/Minus Query 75878 TGGAAGGCTATTCTCAAATCACAGACGGAGACTGGAACACCATATATGCTTTACAAGGAT 75937 ||||| | || ||| | ||||| | || || ||||| || |||||||| |||||||| Sbjct 81535 TGGAAAGAAATCCTCGATTCACAAATCGAAACCGGAACTCCTTATATGCTATACAAGGAC 81476 Query 75938 GCTTGTAACAAGAAGAGTAACCAAAAGAATTTGGGAACAATCAAGAGCTCAAATCTTTGC 75997 || || || ||| || || || |||| ||||| ||||| || ||| | ||| Sbjct 81475 GCCTGCAATGCCAAGTCAAATCATCAGCATTTAGGAACGATCAAATGCAGCAATTTGTGC 81416 Query 75998 ACGGAAATTTTAGAGTACACAGATAAGGATGAGACGGCTGTTTGCAATTTGGCATCAATC 76057 || |||||| |||| || | | ||||| | ||||||||||||||||| || ||| Sbjct 81415 ACAGAAATTGTAGAATATAGTTCTCCTGATGAAATAGCTGTTTGCAATTTGGCTTCGATC 81356 Query 76058 GCCCTTCCAAAGTATGT 76074 | |||||||| | ||| Sbjct 81355 TCTCTTCCAAAATTTGT 81339 >seq2828 Length=37213 Score = 87.8 bits (96), Expect = 2e-12 Identities = 124/172 (72%), Gaps = 2/172 (1%) Strand=Plus/Minus Query 65347 ATCGGTATGAACTCTGAGAAGATGTCCGAGTACATTGAGTATGTGTCGGATCGTCTCCTC 65406 || || |||||| |||| ||||| ||||| ||||| | |||| | || || || || Sbjct 28546 ATTGGCATGAACGCTGAATCGATGTGTGAGTATATTGAATTTGTGGCCGACCGGCTGCTG 28487 Query 65407 AAACAAGTTGGGGTGCCACCCATT-TGGAACGCGAAGAATCCATTTGACTTTATGGAAAA 65465 || ||||| || || || |||||| | |||| || || || || ||||| || Sbjct 28486 GTTGAA-TTGGGCTGTGACAAGTTCTGGAACACAGAGAACCCGTTGGATTTCATGGATAA 28428 Query 65466 CATTAGCCTTGATGGGAAGACCAACTTCTTTGAGAAGCGAGTTGGGGACTAT 65517 ||| || | |||||||| || |||||||||||||| ||||| || || ||| Sbjct 28427 TATTTGCATCGATGGGAAAACTAACTTCTTTGAGAAACGAGTCGGTGAATAT 28376 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 596474283092160