Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Schmidtea_20mediterranea_20[genbank_20GCA_5F000691995.1_202014-05- 30] 12,782 sequences; 700,725,851 total letters Query= NC_021924.1 Length=129052 Score E Sequences producing significant alignments: (Bits) Value seq62 89.7 4e-13 seq12383 87.8 1e-12 seq10814 87.8 1e-12 seq7457 87.8 1e-12 seq4061 87.8 1e-12 seq7081 86.0 5e-12 seq1421 84.2 2e-11 >seq62 Length=83120 Score = 89.7 bits (98), Expect = 4e-13 Identities = 150/216 (69%), Gaps = 2/216 (1%) Strand=Plus/Plus Query 110262 AGAGATTTAAAA--TGCAAATATTTGTCAAAACTTTAACCGGCAAAACCATTACCGTCGA 110319 ||| |||||||| ||||||| ||||| || ||| | || || ||||| || ||| | || Sbjct 2160 AGATATTTAAAACATGCAAATTTTTGTGAAGACTCTTACGGGTAAAACAATAACCCTTGA 2219 Query 110320 AACGGAGCCTGACGATACTGTCGGCCAGGTAAAACAGAAGATTGCCGACAAAGAAGGCGT 110379 | || || |||||| | | | |||||| || ||| |||||||||||| | Sbjct 2220 AGTTGAATCTTCCGATACAATTGAAAATGTAAAAGCCAAAATTCAAGACAAAGAAGGCAT 2279 Query 110380 GCCCGTGGATCAACAAAGACTTATTTATGCGGGTAAACAGCTGGAGGATGCCAGAACAAT 110439 || ||||| ||| || | |||| ||| || ||||| | || || | |||| | Sbjct 2280 TCCTCCTGATCAGCAACGATTGATTTTTGCCGGAAAACAATTAGAAGACGGACGAACTTT 2339 Query 110440 GGCGGATTACAACATTCAAAAAGAATCTACGTTGCA 110475 | |||||||| ||||| |||||||| || || || Sbjct 2340 ATCTGATTACAATATTCAGAAAGAATCCACATTACA 2375 >seq12383 Length=19971 Score = 87.8 bits (96), Expect = 1e-12 Identities = 135/193 (70%), Gaps = 0/193 (0%) Strand=Plus/Minus Query 110277 AAATATTTGTCAAAACTTTAACCGGCAAAACCATTACCGTCGAAACGGAGCCTGACGATA 110336 |||||||||| |||||||| | ||| ||||| ||||| |||| | | | || | Sbjct 8385 AAATATTTGTGAAAACTTTGAACGGTAAAACGATTACACTCGAGGTTGCATCAGGTGACA 8326 Query 110337 CTGTCGGCCAGGTAAAACAGAAGATTGCCGACAAAGAAGGCGTGCCCGTGGATCAACAAA 110396 | | | |||| ||| |||||| || |||||||| | || |||||||||| Sbjct 8325 CCATTGAAAAGGTGAAAGCAAAGATTCAAGATAAAGAAGGATTTCCTCCCGATCAACAAA 8266 Query 110397 GACTTATTTATGCGGGTAAACAGCTGGAGGATGCCAGAACAATGGCGGATTACAACATTC 110456 |||| |||| ||| || ||||| | || |||| | || || | ||||| || |||| Sbjct 8265 GACTCATTTTTGCTGGCAAACAATTAGAAGATGGACGTACTTTGTCTGATTATAATATTC 8206 Query 110457 AAAAAGAATCTAC 110469 |||| |||||||| Sbjct 8205 AAAAGGAATCTAC 8193 >seq10814 Length=18414 Score = 87.8 bits (96), Expect = 1e-12 Identities = 135/193 (70%), Gaps = 0/193 (0%) Strand=Plus/Plus Query 110277 AAATATTTGTCAAAACTTTAACCGGCAAAACCATTACCGTCGAAACGGAGCCTGACGATA 110336 |||||||||| |||||||||||||| ||||| ||||| |||| | | | || | Sbjct 2080 AAATATTTGTGAAAACTTTAACCGGTAAAACGATTACACTCGAGGTTGCATCAGGTGACA 2139 Query 110337 CTGTCGGCCAGGTAAAACAGAAGATTGCCGACAAAGAAGGCGTGCCCGTGGATCAACAAA 110396 | | | |||| ||| |||||| | |||||||| | || |||||| ||| Sbjct 2140 CCATTGAAAAGGTGAAAGCAAAGATTTAAAAGAAAGAAGGATTTCCTCCTGATCAATAAA 2199 Query 110397 GACTTATTTATGCGGGTAAACAGCTGGAGGATGCCAGAACAATGGCGGATTACAACATTC 110456 |||| |||| ||| || ||||| | || |||| | || || | ||||| || |||| Sbjct 2200 GACTCATTTTTGCTGGCAAACAATTAGAAGATGGGCGTACTTTGTCTGATTATAATATTC 2259 Query 110457 AAAAAGAATCTAC 110469 |||| |||||||| Sbjct 2260 AAAAGGAATCTAC 2272 >seq7457 Length=83733 Score = 87.8 bits (96), Expect = 1e-12 Identities = 135/193 (70%), Gaps = 0/193 (0%) Strand=Plus/Plus Query 110277 AAATATTTGTCAAAACTTTAACCGGCAAAACCATTACCGTCGAAACGGAGCCTGACGATA 110336 |||||||||| |||||||| ||||| ||||| ||||| |||| | | | || | Sbjct 44285 AAATATTTGTGAAAACTTTGACCGGTAAAACGATTACACTCGAGGTTGCATCAGGTGACA 44344 Query 110337 CTGTCGGCCAGGTAAAACAGAAGATTGCCGACAAAGAAGGCGTGCCCGTGGATCAACAAA 110396 | | | |||| ||| |||||| || |||||| | | || |||||||||| Sbjct 44345 CCATTGAAAAGGTGAAAGCAAAGATTCAAGATAAAGAATGATTTCCTCCCGATCAACAAA 44404 Query 110397 GACTTATTTATGCGGGTAAACAGCTGGAGGATGCCAGAACAATGGCGGATTACAACATTC 110456 |||| |||| ||| | ||||| | || |||| | || || | ||||| || |||| Sbjct 44405 GACTCATTTTTGCTAGCAAACAATTAGAAGATGGACGTACTTTGTCTGATTATAATATTC 44464 Query 110457 AAAAAGAATCTAC 110469 ||||||||||||| Sbjct 44465 AAAAAGAATCTAC 44477 >seq4061 Length=86116 Score = 87.8 bits (96), Expect = 1e-12 Identities = 135/193 (70%), Gaps = 0/193 (0%) Strand=Plus/Minus Query 110277 AAATATTTGTCAAAACTTTAACCGGCAAAACCATTACCGTCGAAACGGAGCCTGACGATA 110336 |||||||||| |||||||| | ||| ||||| ||||| |||| | | | || | Sbjct 51924 AAATATTTGTGAAAACTTTGAACGGTAAAACGATTACACTCGAGGTTGCATCAGGTGACA 51865 Query 110337 CTGTCGGCCAGGTAAAACAGAAGATTGCCGACAAAGAAGGCGTGCCCGTGGATCAACAAA 110396 | | | |||| ||| |||||| || |||||||| | || |||||||||| Sbjct 51864 CCATTGAAAAGGTGAAAGCAAAGATTCAAGATAAAGAAGGATTTCCTCCCGATCAACAAA 51805 Query 110397 GACTTATTTATGCGGGTAAACAGCTGGAGGATGCCAGAACAATGGCGGATTACAACATTC 110456 |||| |||| ||| || ||||| | || |||| | || || | ||||| || |||| Sbjct 51804 GACTCATTTTTGCTGGCAAACAATTAGAAGATGGACGTACTTTGTCTGATTATAATATTC 51745 Query 110457 AAAAAGAATCTAC 110469 |||| |||||||| Sbjct 51744 AAAAGGAATCTAC 51732 >seq7081 Length=134943 Score = 86.0 bits (94), Expect = 5e-12 Identities = 151/220 (69%), Gaps = 0/220 (0%) Strand=Plus/Minus Query 110277 AAATATTTGTCAAAACTTTAACCGGCAAAACCATTACCGTCGAAACGGAGCCTGACGATA 110336 ||||||| | |||||||| ||||| ||||| ||||| |||| | | | || | Sbjct 118785 AAATATTCATGAAAACTTTGACCGGTAAAACGATTACACTCGAGGTTGCATCAGGTGACA 118726 Query 110337 CTGTCGGCCAGGTAAAACAGAAGATTGCCGACAAAGAAGGCGTGCCCGTGGATCAACAAA 110396 || | | |||| ||| |||||| || |||||||| | || |||||||||| Sbjct 118725 CTATTGAAAAGGTGAAAGCAAAGATTCAAGATAAAGAAGGATTTCCTCCAGATCAACAAA 118666 Query 110397 GACTTATTTATGCGGGTAAACAGCTGGAGGATGCCAGAACAATGGCGGATTACAACATTC 110456 |||| |||| ||| || ||||| | || |||| | || || | ||||| || |||| Sbjct 118665 GACTCATTTTTGCTGGCAAACAATTAGAAGATGAACGTACTTTGTCTGATTATAATATTC 118606 Query 110457 AAAAAGAATCTACGTTGCACATGGTGTTAAGACTGCGAGG 110496 ||| |||||||| | || |||| ||| || | |||| Sbjct 118605 GAAAGGAATCTACACTCCATTTGGTTTTACGATTAAGAGG 118566 >seq1421 Length=159122 Score = 84.2 bits (92), Expect = 2e-11 Identities = 133/191 (70%), Gaps = 0/191 (0%) Strand=Plus/Plus Query 110277 AAATATTTGTCAAAACTTTAACCGGCAAAACCATTACCGTCGAAACGGAGCCTGACGATA 110336 |||||||||| |||||||| | ||| ||||| ||||| |||| | | || || | Sbjct 17265 AAATATTTGTGAAAACTTTGAACGGTAAAACGATTACACTCGAGGTTGTATCAGATGAAA 17324 Query 110337 CTGTCGGCCAGGTAAAACAGAAGATTGCCGACAAAGAAGGCGTGCCCGTGGATCAACAAA 110396 | | | |||| ||| |||||| || |||||||| | || |||||||||| Sbjct 17325 CCATTGAAAAGGTGAAAGCAAAGATTCAAGATAAAGAAGGATTTCCTCCCGATCAACAAA 17384 Query 110397 GACTTATTTATGCGGGTAAACAGCTGGAGGATGCCAGAACAATGGCGGATTACAACATTC 110456 |||| |||| ||| || ||||| | || |||| | || || | ||||| | |||| Sbjct 17385 GACTCATTTTTGCTGGCAAACAATTAGAAGATGGGCGTACTTTGTCTGATTATCATATTC 17444 Query 110457 AAAAAGAATCT 110467 |||| |||||| Sbjct 17445 AAAAGGAATCT 17455 Score = 82.4 bits (90), Expect = 6e-11 Identities = 108/150 (72%), Gaps = 0/150 (0%) Strand=Plus/Plus Query 110273 ATGCAAATATTTGTCAAAACTTTAACCGGCAAAACCATTACCGTCGAAACGGAGCCTGAC 110332 ||||||||||| || ||||||||||| |||||||||||||| | || || || Sbjct 17489 ATGCAAATATTCGTGAAAACTTTAACTGGCAAAACCATTACGCTTGAGGTTGAACCAAGT 17548 Query 110333 GATACTGTCGGCCAGGTAAAACAGAAGATTGCCGACAAAGAAGGCGTGCCCGTGGATCAA 110392 || ||| | | |||||| |||||| |||||||||| || || | |||| Sbjct 17549 GACACTATTGAAAGTGTAAAAGTAAAGATTCAACACAAAGAAGGAGTTCCTCCAGTTCAA 17608 Query 110393 CAAAGACTTATTTATGCGGGTAAACAGCTG 110422 ||||||||||| | || ||||||||| || Sbjct 17609 CAAAGACTTATCTGGGCCGGTAAACAGTTG 17638 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 412777287277526