Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Schmidtea_20mediterranea_20[genbank_20GCA_5F000691995.1_202014-05- 30] 12,782 sequences; 700,725,851 total letters Query= NC_022096.1 Length=258139 Score E Sequences producing significant alignments: (Bits) Value seq3559 125 1e-23 >seq3559 Length=271997 Score = 125 bits (138), Expect = 1e-23 Identities = 186/261 (71%), Gaps = 2/261 (1%) Strand=Plus/Plus Query 35580 GTAGTGTTGCTGAACTCCAGAGTCACATGACCTTCCCACTCAGGTTCCAGCGGCGTCACG 35639 || |||||| || ||||| || ||| ||| |||||||| || || | ||||| ||| Sbjct 226022 GTTGTGTTGGAAAATTCCAGCGTTACAAAACCCTCCCACTCGGGCTCAAATGGCGTGACG 226081 Query 35640 TTGACGATGATACCACAGCGCGCGTAGGTGCTCTTACCCAAACACACCACGAGGACGTTG 35699 || |||||||| || ||||| || || || ||||| || | ||| || ||| || || Sbjct 226082 TTAACGATGATGCCGCAGCGAGCATAAGTACTCTTGCCAAGACAAACGGTGAGAACATTT 226141 Query 35700 CGCGGAATGCGGAAGTATTCGACCGTGCGTGCCAGAGCGAAGCTGTTCGGCGGAATCAGG 35759 || || || ||||| ||||| | || | || || || ||||| || |||||||| | | Sbjct 226142 CGTGGGATACGGAAATATTCAATGGTTCTAGCTAGGGCAAAGCTATTTGGCGGAATGATG 226201 Query 35760 ATGCTGTCAGCCTTAACCGGCTGCAG-GCACTTGGGATCGAAGTTCTTCGGATCAACCAC 35818 || ||| |||| | | || || || ||||||||| || ||||||||||| Sbjct 226202 CAGCAATCA-CCTTCAAAATCAACAAAGCTTTTCTCATCGAAGTTTTTAGGATCAACCAC 226260 Query 35819 TGCGCTGTTGATGTTGGTGAA 35839 | ||||| ||| |||||||| Sbjct 226261 GGTGCTGTGGATATTGGTGAA 226281 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 825784839143280