Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Schmidtea_20mediterranea_20[genbank_20GCA_5F000691995.1_202014-05- 30] 12,782 sequences; 700,725,851 total letters Query= NC_023006.1 Length=43564 Score E Sequences producing significant alignments: (Bits) Value seq6794 165 2e-36 >seq6794 Length=1050243 Score = 165 bits (182), Expect = 2e-36 Identities = 425/638 (67%), Gaps = 21/638 (3%) Strand=Plus/Plus Query 3950 CCGGCCGAAGAAATCGTGCACGGCTTCCTTGAAGACATGGTGGGCCAGAAGCGCGGCCTG 4009 || || || || || | |||||||| | || || ||||| || |||||||| || Sbjct 600365 CCAGCGGATGAGATTATTCACGGCTTTTTACCTGAAATTGTGGGGCAAAAGCGCGGTCTC 600424 Query 4010 CCGTGGATGGCCACCGCCCTGTACCGCATGCGCCAGATGGCCGCGATGGAACAGGCCGCC 4069 || |||||||| || | || || ||| ||||| | | | | ||| | || || Sbjct 600425 CCATGGATGGCGACGGGGCTTTATCGCCTGCGCATGCTCAAAGGCTTTGAAGACGCTGCG 600484 Query 4070 ATCGTCAACGCCCGCGTTGGTGCCAACAAACTGGGTTTCATCACCTGGAAAGATGGCATG 4129 | || ||||| || |||| || ||| |||| | || |||||||| |||| Sbjct 600485 CTGGTGAACGCTCGAATTGGCGCATCGAAAATGGGCGTGATTCAGTGGAAAGACGGCAGA 600544 Query 4130 GGGCCGGAGT---ACGACGAAGACGAAGAAA---TTGTGATCGACAGCGAGCCTGGCGAA 4183 ||||| ||| ||||||||||| | | ||| ||| || |||||||| || Sbjct 600545 GGGCCAGAGATGGACGACGAAGACCGCGCCAACTTTGAGATGAACGCAGAGCCTGGGGAG 600604 Query 4184 TT--CAACGTGCTGCCGGCTGGCGCCGAGAT-TCACGAAACCAGCCCGCAGTACCCAAGC 4240 || ||| | ||||||| ||||| || | ||| ||| | |||||| ||||| ||| Sbjct 600605 TTTTCAA--TCCTGCCGGAGGGCGCGGAATTGTCA-GAATGGAACCCGCAATACCCCAGC 600661 Query 4241 AACGAATATGCGCCGTTCGTGAAGCAGGCC---CTGCGCAGCATGGCTGCCGGCTTCGGC 4297 |||| | | ||| || | ||| |||||| |||| | || ||||| ||| Sbjct 600662 GGTGAATTTATGTTGTTT---AACAAAGCCATGCTGCGCGGCATATCGGCGGGCTTTGGC 600718 Query 4298 GTTCTGTACAACAACCTGGCCAGCGACCTGGAAGGCGTCAACTTCAGCAGCATTCGCCAA 4357 || || |||||||| | |||| |||| | || ||||| ||| ||||| | || Sbjct 600719 GTGCTTTACAACAATTTAGCCAACGACTTAGAGAATGTCAATTTCTCAAGCATCAGGCAG 600778 Query 4358 GGCACCCTGGACGAACGCGAGCACTGGAAGGACCTGCAAGAGTGGCTGATTGAAAGCTTG 4417 || || | ||||| |||||||| ||||| || ||||||||||||| |||||| | ||| Sbjct 600779 GGGACGTTAGACGAGCGCGAGCATTGGAAAGAAATGCAAGAGTGGCTCATTGAATGTTTG 600838 Query 4418 GTGCAGCCGATCTTCAACGCCTGGCTGCCGCGTGCGCTGCTGCTTGGACAGCTGACCAGC 4477 |||||||| | || | || ||| |||||| ||||| ||| || || | | Sbjct 600839 GTGCAGCCAGTGTTTGAAGCGTGGTTGCCGCTAGCGCTACTGGGCGGGCACATCGCGGTA 600898 Query 4478 AACGGCAAGCCACTGCGCGCCGAGCGTATCGACCGCTACCGCAACGCTGTCAGCTGGCAG 4537 || || |||| || || ||||| | | ||||| || | || | ||||| Sbjct 600899 AATGGGCGGCCATTGAAGGCTGAGCGGCTAAAACGCTA-TGCGCGGGTGGC--GTGGCAA 600955 Query 4538 GCTCGCCGCTGGCAGTGGATCGACCCGCGCGCTGACGT 4575 || | |||||||||||||| |||||||| || ||||| Sbjct 600956 GCAAGGCGCTGGCAGTGGATAGACCCGCGGGCGGACGT 600993 Score = 113 bits (124), Expect = 1e-20 Identities = 271/410 (66%), Gaps = 0/410 (0%) Strand=Plus/Plus Query 6489 GGCATCAACGCCGTGGACTTCGCTGCGCTGTGGCCGTCGTATGCCGAGCTGGTGCAGATG 6548 ||||||||||| |||| ||| |||| || || | | |||||| || ||||| ||| Sbjct 603283 GGCATCAACGCGGTGGCCTTTGCTGGAGTGAACCCCACCTTTGCCGAACTCGTGCAAATG 603342 Query 6549 GAAACCGAAATCGCGGCCGACAACGCCGACGTGAACCAGATGGCCTACGTGTCCAACGCC 6608 || || | ||| ||| | ||| || ||||| | ||| |||||| | ||| | Sbjct 603343 GAGACGGTAATTGCGCAGGCCAATGCAGACGTAGAGAGCATGTACTACGTCTTAAACCCT 603402 Query 6609 AAGTTCCGTGGCCACGCCAAGACCACTTCCAAGTTCGCAGGCGGCACCGACCAGGGCGTT 6668 | || ||| | || ||||| | | || || | ||| || || | | | || Sbjct 603403 GTGCAGCGCGGCAATGCTAAGACGGCGACAAAAATCCCTGGCATCAACGGCAGCGCCATT 603462 Query 6669 ATCTGGGAAGGTGGCGGCACCGTGAACGGCTACCGCTCCGAAATCACCAACCAGATTTCT 6728 || ||||| | |||| |||| | || || || | || | | ||||| || | Sbjct 603463 ATTTGGGAGGCTGGCAACACCATAAATGGTTATCAATCTCTTGTGTCTAACCAAATCAAT 603522 Query 6729 GACGGTGACGTGTTCTTCGGCAACTTCGGTGACCTGATTATCGGTCTGTGGGGCGGCCTG 6788 | || ||||||||||| || ||||||| ||| || | || || ||||||||||| | Sbjct 603523 GCTGGCGACGTGTTCTTTGGTAACTTCGCCGACTTGCTCATTGGCATGTGGGGCGGCTTA 603582 Query 6789 GACCTGACCGTGGACCCGTACAGCCTGAGCAAGTCGGGCGGCCTGCGCGTCGTGGTCTTC 6848 || ||| || ||||||||||||| ||| | ||| || | ||||| | | ||| Sbjct 603583 GAGCTGCATGTAGACCCGTACAGCCAAAGCCAAAAGGGACGCATCCGCGTGACGATATTC 603642 Query 6849 CAGGACGTGGACTTTGTTCTGCGCCGCGTCGAATCCATCTGCTGGGGCAA 6898 || ||| | || |||| |||||||| | |||| |||||| ||||| Sbjct 603643 CAAGACATTGATTTTGCAGTGCGCCGCACCCAATCTTTCTGCTTAGGCAA 603692 Score = 104 bits (114), Expect = 7e-18 Identities = 411/629 (65%), Gaps = 42/629 (7%) Strand=Plus/Plus Query 1797 GACCGCCTGGAAGTTGAAGTGGTGGCCTGGGGCATCGGTGAGGAATCTTGGTC----GAT 1852 |||||||| |||| ||||| ||||| ||||| | ||||| ||||||||||| || Sbjct 598323 GACCGCCTAGAAGCCGAAGTAGTGGCGTGGGGAGTGGGTGAAGAATCTTGGTCAGTGGAC 598382 Query 1853 TGCGTATTACGTGCTGTGGGGTTCGCCCGAGCAAGGC---GACGTGTGGGAGGACCTGGA 1909 || || ||| || |||||| ||||| ||| || || ||| || | || Sbjct 598383 TGGGTG--ACG--CTATGGGGTGA-CCCGATG--GGCATTGATGTTTGGTTAGATTTAGA 598435 Query 1910 CGACCTGCTGGCGTCCACCTACCAGCACGAAAGCGGCGCCGTTATGCCGATCATGGCAGC 1969 ||| | || || ||||||||||| |||||||| | ||| |||| |||| | Sbjct 598436 GGACTTTTTGAAAAGCAAATACCAGCACGAGAGCGGCGCGATGATGACGATTTCGGCAAC 598495 Query 1970 GGTGC-TGGACACTGGCGGCAGCAACGGCATGACCCAGGCGGCATACGACTACGCCAAGG 2028 |||| |||| || ||||| | ||||| || |||||||| || |||| ||||| Sbjct 598496 -GTGCATGGATACAGGCGGGACGGGCGGCACAACTCAGGCGGCGTATGACTGGCTCAAGG 598554 Query 2029 GCCGCACTGGTCGCCGGCTGTTCGCCGGCAAGGGTATCAGC-GGCTGGGGCCGACCGATC 2087 || || ||| | | || | | |||||| || ||| ||||||||| || || Sbjct 598555 GCAAGACAGGTAAAAAGATATTTGGGGTCAAGGGAAT-AGCGGGCTGGGGCAAGCCCATT 598613 Query 2088 GTTGAG-AAGCCGCAGCGCAA--GCAGTCTGGCAAGAACGCGCGGAAAGTGGACCTGTTC 2144 | |||| ||||||| | || |||| | ||| || | | ||||||| | || | || Sbjct 598614 G-TGAGCCAGCCGCAAAGAAAGCGCAG-CGGGCGAG-ATGTGCGGAAAATTGATTTATTT 598670 Query 2145 CTGGTCGGCGTTGACGAAGCCAAGCTGATAGTCATGCGCCGCCTGGCTGCCACCGTGGCA 2204 | || ||||| ||||||||||| || | |||||||||| | ||| Sbjct 598671 TTAGTTGGCGTGGACGAAGCCAAATTGCTCATCATGCGCCG-------------TTTGCA 598717 Query 2205 GCCAAGGAACCCGGTGGCCCAGGCTACTGCCACACCCCAGCTGACCGCGATGAAGACTGG 2264 || || | ||| | ||||| |||||| ||| ||| |||||| || ||| Sbjct 598718 GCTCTCTAA--AGTGGGCGCTGGCTATTGCCACGTCCCCATTGAGCGCGATTCCGAGTGG 598775 Query 2265 TACAAGCAGCTGACCGCTGAAAAGCTGGTGACCCGATACCTGAAGGGCCAGCCTGTGCGC 2324 ||||| ||| | || || ||| | |||||| || ||||| || | Sbjct 598776 TACAACCAGATTACGGCAGAACGCATAGTGACCAAATTTAGCAAGGGTTTCCCAAAGAAG 598835 Query 2325 GAGTGGCACAAGCCTGACCGTGCGCGAAACGAAGGCCTGGACTGCCGCGTGTACGCATAC 2384 || |||||||| | || | | ||| ||||| | ||||| ||||||||||| ||| | Sbjct 598836 GAATGGCACAAAAC-GA--GGGAGCGCAACGAGGCGCTGGATTGCCGCGTGTATGCACAG 598892 Query 2385 GCTGCGCTGAAGATCATGAACCCATCGTT 2413 || ||| | || || || || ||||| || Sbjct 598893 GCAGCGTTAAAAATTATTAATCCATCCTT 598921 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 139262058725384