Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Schmidtea_20mediterranea_20[genbank_20GCA_5F000691995.1_202014-05- 30] 12,782 sequences; 700,725,851 total letters Query= NC_024625.1 Length=151109 Score E Sequences producing significant alignments: (Bits) Value seq2828 129 6e-25 >seq2828 Length=37213 Score = 129 bits (142), Expect = 6e-25 Identities = 170/233 (73%), Gaps = 2/233 (1%) Strand=Plus/Plus Query 120355 TACTCGCCGACGCGTTTCTCAAAAAAGTTTGTTTTGCCCTCCATCGAAATGTTGTTCATA 120414 || || ||||| ||||||||||| ||||| ||||| || || || |||| || | ||| Sbjct 28377 TATTCACCGACTCGTTTCTCAAAGAAGTTAGTTTTCCCATCGATGCAAATATTATCCATG 28436 Query 120415 AACTCGAACGGGTTGCTC-GCGTTAAAGTATTTCGGCTGGCCCAACTGTACGAGCAGTCG 120473 || || |||||||| ||| | ||| || | || |||||| | || ||||| || Sbjct 28437 AAATCCAACGGGTT-CTCTGTGTTCCAGAACTTGTCACAGCCCAATTCAACCAGCAGCCG 28495 Query 120474 GTCCGCTACAAACTCAATGTACTCGCACATGGACTGCGCGTTCATGCCCAGCAACGCCAC 120533 ||| || ||||| ||||| ||||| ||||| || | ||||||||||| | ||| | || Sbjct 28496 GTCGGCCACAAATTCAATATACTCACACATCGATTCAGCGTTCATGCCAATCAATGAAAC 28555 Query 120534 CGGCAACGCCGACGTGAAAAACTCCTTCTCAATGTCCACCGCCTCCTTGAACA 120586 |||||| || |||| ||| |||||||| || | || || || |||| || Sbjct 28556 CGGCAATGCGTCGGTGAGAAATTCCTTCTCGATTCCGACAGCTTCTTTGATCA 28608 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 483343561441680