Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Schmidtea_20mediterranea_20[genbank_20GCA_5F000691995.1_202014-05- 30] 12,782 sequences; 700,725,851 total letters Query= NC_025430.1 Length=42351 Score E Sequences producing significant alignments: (Bits) Value seq6794 174 4e-39 >seq6794 Length=1050243 Score = 174 bits (192), Expect = 4e-39 Identities = 492/745 (66%), Gaps = 23/745 (3%) Strand=Plus/Plus Query 32374 GCGTGGCTGGACTGATTGCCCGCATCGACAACGA-GCGCGGTTTCTGGTGGTCACC--AT 32430 ||| |||||| | ||||||||| | || ||||| | | ||||| ||||| || | || Sbjct 611759 GCGCGGCTGGCATTATTGCCCGCGTTGATAACGATGAGGGGTTT-TGGTG--CAGCTTAT 611815 Query 32431 CAAACCAGGAAATCTATGGCATCCAGGGCACGGCCAGAACCATTGATTTCACCCTGGGTG 32490 | || | ||| ||||||| |||||||||| | |||||||||| | || | Sbjct 611816 CGAATAAATTAATAAATGGCATTGTGGGCACGGCCCGCCCCATTGATTTTGCGCTTAACG 611875 Query 32491 ACACGTCCAGCCGTGCAAACCTGCTGAACGAAAACGAAGTCACCACCATCATTCGCCAGG 32550 || | | |||| || |||| |||||| | | || |||| | |||| || Sbjct 611876 ACCCCGCTTGCCGCGCCAACCAATTGAACGCGGCCAAGGTGGGCACCGTTGTTCGGCAAA 611935 Query 32551 ACGGTTTCCGCCTGTGGGGCAACCGCACCACTTCCAGCGATCCGAAATGGGCGTT----T 32606 |||| ||| | ||||||| |||||| | ||| ||||| | ||| |||||||| | Sbjct 611936 ACGGATTCAGGTTGTGGGGGAACCGCTCGCTTTCAAGCGACCAGAATTGGGCGTTCTTAT 611995 Query 32607 CTGTGCGTTGTTCGCACGGCTGACATCATCAATGACAGCCTGTTGCGTGCACACCTGTGG 32666 | ||||| || ||||| ||||| || || |||||||| |||| || || ||| Sbjct 611996 CGGTGCGACGT----ACGGCGGACATGATTAACGACAGCCTCGTGCGCAACCATCTTTGG 612051 Query 32667 GCCGTAGACCGTGGCATCACCAAACAATACGTCAATGACGTGATTGAAGGCGTGAACGCG 32726 || || ||| | ||||||| ||| ||||| | || || || || |||||||| ||| Sbjct 612052 GCTGTGGACAGAGGCATCAACAAGCAATATTTAAAAGATGTTGCAGACGGCGTGAATGCG 612111 Query 32727 TACCTGCGCAACCTGGTGAGCCTGGGCGCAATTCTTGGCGGCACGTGTTGGGCTGACCCT 32786 |||||||||| | | | | || ||||| || |||| ||| ||||| | | | Sbjct 612112 TACCTGCGCAGCTTAAAAACACAAGGAGCAATCATTAATGGCAAGTGCTGGGCGGCCGAT 612171 Query 32787 ---GACTTAAATACTGCTGACCAAATC--GCTGACGGTAAGGTATACTTTGATTTTGATT 32841 | | | ||| | ||| |||||| || ||| | || || || || ||||||| Sbjct 612172 AGCGGCCTGAATTCGCCTG--CAAATCTATCTAGCGGCATGGCCTATTTCGACTTTGATT 612229 Query 32842 TCACGCCTGTTTAT-CCGGCTGAACACATTATCTTCCGCAGCCAATTGACCAACGATTAT 32900 | ||| | || || || || |||||| | |||||| | ||| ||| |||||| Sbjct 612230 TTGTGCC-GCCAATGCCTGCCGAGCACATTGTTTTCCGCTCATACATGAACAAAGATTAT 612288 Query 32901 ATTAGTGAGGTATTCGAATAATGGCCGCACGTGACGTTTTGAAAAACATCAACTTATTTG 32960 | |||||| | || ||||| ||| ||| || ||| | || || || | Sbjct 612289 CTATCTGAGGTGCTATAAATATGGCTGCAAACGACATTCGCCGTAACTTTAATTTGTTCG 612348 Query 32961 TTGATGGCCGTGGTTACGCGGGCCAGGTGGAGAGCGTCACGCCGCCCACCTTAACCCTGC 33020 | || ||| | |||||||| || | || |||||||||||| | | | Sbjct 612349 TAGACGGCACGAGCTACGCGGGTCAAATTGAAGAATTCACGCCGCCCAAGCTCGCTTTAA 612408 Query 33021 AAACCGAAGAATTCCGCGCAGGCGGCATGGATGCGCCCATTGATGTGACGTTGGGCATGG 33080 |||| |||||| | ||| ||||| ||||||||||| || | | || ||||||||| Sbjct 612409 AAACTGAAGAAATTCGCTGCGGCGGTATGGATGCGCCGATGTCTATCGCGCTGGGCATGG 612468 Query 33081 AAAAGCTGGAAGCCAGCTTTGCGCT 33105 | ||| |||| || ||||| |||| Sbjct 612469 AGAAGTTGGAGGCGAGCTTCTCGCT 612493 Score = 174 bits (192), Expect = 4e-39 Identities = 492/745 (66%), Gaps = 23/745 (3%) Strand=Plus/Plus Query 32374 GCGTGGCTGGACTGATTGCCCGCATCGACAACGA-GCGCGGTTTCTGGTGGTCACC--AT 32430 ||| |||||| | ||||||||| | || ||||| | | ||||| ||||| || | || Sbjct 614104 GCGCGGCTGGCATTATTGCCCGCGTTGATAACGATGAGGGGTTT-TGGTG--CAGCTTAT 614160 Query 32431 CAAACCAGGAAATCTATGGCATCCAGGGCACGGCCAGAACCATTGATTTCACCCTGGGTG 32490 | || | ||| ||||||| |||||||||| | |||||||||| | || | Sbjct 614161 CGAATAAATTAATAAATGGCATTGTGGGCACGGCCCGCCCCATTGATTTTGCGCTTAACG 614220 Query 32491 ACACGTCCAGCCGTGCAAACCTGCTGAACGAAAACGAAGTCACCACCATCATTCGCCAGG 32550 || | | |||| || |||| |||||| | | || |||| | |||| || Sbjct 614221 ACCCCGCTTGCCGCGCCAACCAATTGAACGCGGCCAAGGTGGGCACCGTTGTTCGGCAAA 614280 Query 32551 ACGGTTTCCGCCTGTGGGGCAACCGCACCACTTCCAGCGATCCGAAATGGGCGTT----T 32606 |||| ||| | ||||||| |||||| | ||| ||||| | ||| |||||||| | Sbjct 614281 ACGGATTCAGGTTGTGGGGGAACCGCTCGCTTTCAAGCGACCAGAATTGGGCGTTCTTAT 614340 Query 32607 CTGTGCGTTGTTCGCACGGCTGACATCATCAATGACAGCCTGTTGCGTGCACACCTGTGG 32666 | ||||| || ||||| ||||| || || |||||||| |||| || || ||| Sbjct 614341 CGGTGCGACGT----ACGGCGGACATGATTAACGACAGCCTCGTGCGCAACCATCTTTGG 614396 Query 32667 GCCGTAGACCGTGGCATCACCAAACAATACGTCAATGACGTGATTGAAGGCGTGAACGCG 32726 || || ||| | ||||||| ||| ||||| | || || || || |||||||| ||| Sbjct 614397 GCTGTGGACAGAGGCATCAACAAGCAATATTTAAAAGATGTTGCAGACGGCGTGAATGCG 614456 Query 32727 TACCTGCGCAACCTGGTGAGCCTGGGCGCAATTCTTGGCGGCACGTGTTGGGCTGACCCT 32786 |||||||||| | | | | || ||||| || |||| ||| ||||| | | | Sbjct 614457 TACCTGCGCAGCTTAAAAACACAAGGAGCAATCATTAATGGCAAGTGCTGGGCGGCCGAT 614516 Query 32787 ---GACTTAAATACTGCTGACCAAATC--GCTGACGGTAAGGTATACTTTGATTTTGATT 32841 | | | ||| | ||| |||||| || ||| | || || || || ||||||| Sbjct 614517 AGCGGCCTGAATTCGCCTG--CAAATCTATCTAGCGGCATGGCCTATTTCGACTTTGATT 614574 Query 32842 TCACGCCTGTTTAT-CCGGCTGAACACATTATCTTCCGCAGCCAATTGACCAACGATTAT 32900 | ||| | || || || || |||||| | |||||| | ||| ||| |||||| Sbjct 614575 TTGTGCC-GCCAATGCCTGCCGAGCACATTGTTTTCCGCTCATACATGAACAAAGATTAT 614633 Query 32901 ATTAGTGAGGTATTCGAATAATGGCCGCACGTGACGTTTTGAAAAACATCAACTTATTTG 32960 | |||||| | || ||||| ||| ||| || ||| | || || || | Sbjct 614634 CTATCTGAGGTGCTATAAATATGGCTGCAAACGACATTCGCCGTAACTTTAATTTGTTCG 614693 Query 32961 TTGATGGCCGTGGTTACGCGGGCCAGGTGGAGAGCGTCACGCCGCCCACCTTAACCCTGC 33020 | || ||| | |||||||| || | || |||||||||||| | | | Sbjct 614694 TAGACGGCACGAGCTACGCGGGTCAAATTGAAGAATTCACGCCGCCCAAGCTCGCTTTAA 614753 Query 33021 AAACCGAAGAATTCCGCGCAGGCGGCATGGATGCGCCCATTGATGTGACGTTGGGCATGG 33080 |||| |||||| | ||| ||||| ||||||||||| || | | || ||||||||| Sbjct 614754 AAACTGAAGAAATTCGCTGCGGCGGTATGGATGCGCCGATGTCTATCGCGCTGGGCATGG 614813 Query 33081 AAAAGCTGGAAGCCAGCTTTGCGCT 33105 | ||| |||| || ||||| |||| Sbjct 614814 AGAAGTTGGAGGCGAGCTTCTCGCT 614838 Score = 163 bits (180), Expect = 8e-36 Identities = 689/1077 (64%), Gaps = 37/1077 (3%) Strand=Plus/Plus Query 18969 ATCAACGCATCCTGGTGGCCCGTTCCCGCGAACAGGCCGCCAACAATGATTATGCCAAAA 19028 |||||||||| || ||||| || || || || |||| || || || || ||||| ||| Sbjct 599844 ATCAACGCATACTTGTGGCGCGGTCTCGTGAGCAGGTGGCGAATAACGACTATGCAAAAG 599903 Query 19029 AGTTCCTGCGTCTGTGCCGCACAAACATTGTGGGGCCAAAAGGCGTTCTGTTGCAGGCAA 19088 || |||| |||||||| |||||| || || |||||||| || |||| || Sbjct 599904 CCTTTGTGCGCATGTGCCGCCAAAACATCGTCGGCAATAAAGGCGTGATGCTGCAAGCTC 599963 Query 19089 AAAGCCAGGATAACACCGGAAAACTGGACACCCTGGCGAATGAAGCCATTGAACTGGCGT 19148 || |||| ||| || ||| || ||||| || ||| | ||||| ||| ||||| Sbjct 599964 AATCAAAGGACGACAAAGGCGCACTCGATACCCTCGCCAATAACGCCATAGAAGAGGCGT 600023 Query 19149 TTGACGCATGGGGCAAAAAGACCAACTGTGACGTGACCGGTAAGTTGTCCTGGCGCGCCA 19208 || || ||| || | || ||| | | |||| ||| |||||| | Sbjct 600024 GGGATGCCTGGAGCCACCGCGATTCTTGCGACATAGCGGGTATACAGTCGTGGCGCAGCT 600083 Query 19209 TCCAGGCCGCCTGCGTCAA--CAGC-GTGGCCAAAGACGGTGAATTCTTCGTGCGCCTGG 19265 | ||||| | ||||| | |||| ||| ||||| || || || | ||||| Sbjct 600084 TGCAGGCTTCTTGCGTGATGTCAGCCGTG---AAAGATGGGGAGTTTATGCTGCGCAAAA 600140 Query 19266 TGTTTGGGGCTGACGCAGGGCCGTGGGGCTTCTCGCTGCAACTGCTGGACCCGCAACGCT 19325 | | || || | || || | ||||| |||||||| ||||||||||||| || | Sbjct 600141 TCGTCGGCAAAGAATCTGGACCATTCGGCTTTGCGCTGCAAGTGCTGGACCCGCAGCGTT 600200 Query 19326 GTCCTGTGGACATGGTTGAAGA--TCGACTGCCA-AACGGAAATTTCATCCGCCAGGGAA 19382 || | | | | |||| |||| | | ||||| ||||||||| | || | Sbjct 600201 GTAATCCGCA---GTTTGACCGCTTCGATTTTGATAACGGCAATTTCATCAGAAGCGGCA 600257 Query 19383 TCGAGTTTAACCGATACGGGCGGCCTATCGCGTATTATTTCAGCACAGTTGAT------- 19435 |||| || ||| | || ||| | || ||| | ||| || | |||| Sbjct 600258 TCGAATTCAACAAGTGGGGCAAGCCGCTGGCCTATCACTTC--CAAA-TTGAGAGCGAGC 600314 Query 19436 --GAATCGGATGAAAACTACCGTTG-GGCTGGGCGTGACTTCGTGCGCGTGCCTGCGGAT 19492 || | | | | |||| | ||| | || | ||| | | | ||| |||||| Sbjct 600315 GCGACGCAGTTTACGCCTACAACTACGGCGGCACGAG-CTTTATAAGGGCGCCAGCGGAT 600373 Query 19493 GAAATCCTGCACGGTTTCTTTGATGACATGGTGGGCCAGAAACGCGGCCTGCCCTGGATG 19552 || || | ||||| || || ||| || ||||| || || ||||| || || |||||| Sbjct 600374 GAGATTATTCACGGCTTTTTACCTGAAATTGTGGGGCAAAAGCGCGGTCTCCCATGGATG 600433 Query 19553 GCCACCAGCCTGTTTCGTATGCGCCACCTGGGCGGCATGGAAGAAGCCGCACTGGTCAAC 19612 || || | || | ||| ||||| || ||| | ||||| || || ||||| ||| Sbjct 600434 GCGACGGGGCTTTATCGCCTGCGCATGCTCAAAGGCTTTGAAGACGCTGCGCTGGTGAAC 600493 Query 19613 GCGCGAGCAGGTGCCAACAAAATGGGGTTCATCGAATGGGATGAAAACGGCGCTGGACCT 19672 || ||| || || |||||||| | || | ||| | || |||| || || Sbjct 600494 GCTCGAATTGGCGCATCGAAAATGGGCGTGATTCAGTGGAAAGA---CGGCAGAGGGCCA 600550 Query 19673 GAATTCGACGATGAAGACGAACTGATCATTGACAGTGAAC-------CGGGTGAATTCCA 19725 || | ||||| |||||| | | |||| | ||||| | || || || Sbjct 600551 GAGATGGACGACGAAGACCGCGCCAACTTTGAGA-TGAACGCAGAGCCTGGGGAGTTTTC 600609 Query 19726 GGTGCTGCCACAGGGCGCACGCATCAAAGACTGGTCACCGCAATACCCCAACGGCGAATT 19785 | ||||| ||||||| | ||| ||| ||||||||||||| ||| ||||| Sbjct 600610 AATCCTGCCGGAGGGCGCGGAATTGTCAGAATGGAACCCGCAATACCCCAGCGGTGAATT 600669 Query 19786 TGCCGTGTTCACCAAACAGATGCTGCGCGGCATGGCTTCTGGCATGGGCGTGGCTTACAA 19845 | |||| | |||| |||||||||||||| | | ||| | |||||| |||||| Sbjct 600670 TATGTTGTTTAACAAAGCCATGCTGCGCGGCATATCGGCGGGCTTTGGCGTGCTTTACAA 600729 Query 19846 CAACCTGGCCAACGACCTGGAAGGCGTCAATTTCAGTTCCATCCGACAGGGCACGCTTGA 19905 ||| | ||||||||| | || ||||||||| |||| | ||||| ||| | || Sbjct 600730 CAATTTAGCCAACGACTTAGAGAATGTCAATTTCTCAAGCATCAGGCAGGGGACGTTAGA 600789 Query 19906 CGAGCGCGAAAGCTGGAAGGAATTGCAGGAATGGCTAATCGAAAACCTGCACCAGCCTGT 19965 ||||||||| ||||| ||| |||| || ||||| || ||| || ||||| || Sbjct 600790 CGAGCGCGAGCATTGGAAAGAAATGCAAGAGTGGCTCATTGAATGTTTGGTGCAGCCAGT 600849 Query 19966 TTTTGACGCCTGGCTGCCGCGCGCCCTGCTGTCTGGACGCATCACGGTGAAAGGCCG 20022 ||||| || ||| |||||| || || ||| || | |||| |||| || || || Sbjct 600850 GTTTGAAGCGTGGTTGCCGCTAGCGCTACTGGGCGGGCACATCGCGGTAAATGGGCG 600906 Score = 132 bits (146), Expect = 1e-26 Identities = 203/285 (71%), Gaps = 12/285 (4%) Strand=Plus/Plus Query 20466 GTAGAACTGGCGTTTTCCTCCGAAATCGAGGTTGAACGCTGGTACGGTATCGAAATTCTG 20525 || || || || |||||||| ||| || ||||| ||||||||||| | ||||| || Sbjct 601930 GTTGAGCTCGCTTTTTCCTCAGAAGCAGAAGTTGAGCGCTGGTACGGCGTTGAAATCCTC 601989 Query 20526 GACCATTC--GCCGGAAAG-CGTGC---GCCTGGACCGTCTGCGTGACGGTGGGGCGCTG 20579 ||||| || | | || ||| | ||| ||| || ||||||| | | ||| Sbjct 601990 GACCACTCTAGTGGCGCAGTCGTTCTTAGCC-GGATTGTA-----GACGGTGCGCCACTG 602043 Query 20580 CTGGTTGACCACGATTGGACTGACCAGGTGGGCGTTGTTGAATCCGTCAGCATTGACGCT 20639 ||| | || ||||||| | ||| |||| || ||||| || |||||||| Sbjct 602044 CTGTTGGATCACGATTCGCGCCGCCAATTGGGGGTCGTTGAGAGTGTTTCGATTGACGCA 602103 Query 20640 GACCGCCGGGGGCGGGCTGTGGTGCGCTTTGGCCGAAGTGCACGCGCTGACGAGATTTTC 20699 |||||||||||||||||||||||||||||||| ||||||| | || || || || ||| Sbjct 602104 GACCGCCGGGGGCGGGCTGTGGTGCGCTTTGGGAGAAGTGCGCTGGCCGATGAAATATTC 602163 Query 20700 CAGGACATCGTTGACGGCATTCGCAAGCATGTTTCCGTTGGCTAC 20744 | ||||| |||||||| | |||||||||||||| || ||| Sbjct 602164 AATGACATTAAAGACGGCATAAGAAAGCATGTTTCCGTGGGTTAC 602208 Score = 120 bits (132), Expect = 8e-23 Identities = 213/304 (70%), Gaps = 10/304 (3%) Strand=Plus/Plus Query 25513 CGGCGAATACCTGCCAGACGGCAAACAAATAACAATTGACGGCATAGTGGTGACATAAAT 25572 ||||| || |||||||||||||| || | | ||||| ||||| | ||| | || ||| Sbjct 606774 CGGCGTTTATCTGCCAGACGGCAAGCAGGTCAGCATTGAAGGCATCGAGGTCAAAT-AAT 606832 Query 25573 GGCGGGTGCCTTCACAGTTGTAAACTTATC--TCAATTACCAGCGCCAAACGTTGTTGTG 25630 ||| | ||| ||| |||| | |||| ||||| || ||||||| ||||||| | Sbjct 606833 GGC---AGACTTTACAAGTGTAGA--TATCAGCCAATTGCCCGCGCCAACTGTTGTTGAG 606887 Query 25631 CCGCTGGACTTTGAAACGATTCTGGCGGCCATGATCGCCGATTTGCAGGATCGTGACCCC 25690 ||||||| |||||| ||| | || |||||| | |||||||| | | ||||| | Sbjct 606888 GCGCTGGATTTTGAAGTCATTTTTGCTGCCATGCTGGCCGATTTAAAAGTGCGTGATGCG 606947 Query 25691 ACATTCACCGCATTGGTGGAATCTGACCCCGCTTATAAAATCCTGGAGGTCTGCGCTTAC 25750 | || | || || || ||||| |||| ||| || || |||| ||||| ||| Sbjct 606948 GCTTTTAATGCGCTGACTGAGAGCGACCCAGCTTTTAAGATTTTGCAGGTGTGCGCCTAC 607007 Query 25751 CGGGAGTTACTGCTGCGTCAGC-GAGTTAATGAAGCGGCCAAAGCAGTTATGCTGGCTTA 25809 || ||| | || | || |||| ||||||| ||||| || ||| | || ||| |||| || Sbjct 607008 CGCGAGCTGCTCATCCG-CAGCAGAGTTAACGAAGCTGCTAAATCGGTAATGGTGGCCTA 607066 Query 25810 CGCG 25813 ||| Sbjct 607067 TGCG 607070 Score = 118 bits (130), Expect = 3e-22 Identities = 163/228 (71%), Gaps = 0/228 (0%) Strand=Plus/Plus Query 22134 ATTTGGGAACCGGGCAACACCCTGAACGGTTACCGCGCCGAAGTTACCAACCAGGTTCAG 22193 |||||||| | ||||||||| | || ||||| | | || | ||||| | | Sbjct 603463 ATTTGGGAGGCTGGCAACACCATAAATGGTTATCAATCTCTTGTGTCTAACCAAATCAAT 603522 Query 22194 GATGGTGACGTGTTCTTTGGCAACTTCGCTGACTTGGTTGTTGGTATGTGGGGCGGCCTG 22253 | ||| |||||||||||||| |||||||| |||||| | |||| |||||||||||| | Sbjct 603523 GCTGGCGACGTGTTCTTTGGTAACTTCGCCGACTTGCTCATTGGCATGTGGGGCGGCTTA 603582 Query 22254 GACATGACGGTTGACCCGTATAGCCTGAGCAAATCCGGTGGCCTGCGCATCGTGGTATTC 22313 || || || |||||||| |||| ||| || || || | ||| | | ||||| Sbjct 603583 GAGCTGCATGTAGACCCGTACAGCCAAAGCCAAAAGGGACGCATCCGCGTGACGATATTC 603642 Query 22314 CAGGACGTGGATTTTGCGGTGCGCCGCGTTGAATCCTTCTGCCTGGGC 22361 || ||| | |||||||| ||||||||| |||| |||||| | ||| Sbjct 603643 CAAGACATTGATTTTGCAGTGCGCCGCACCCAATCTTTCTGCTTAGGC 603690 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 135381047898892