Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Schmidtea_20mediterranea_20[genbank_20GCA_5F000691995.1_202014-05- 30] 12,782 sequences; 700,725,851 total letters Query= NC_025960.1 Length=148981 Score E Sequences producing significant alignments: (Bits) Value seq9680 102 8e-17 seq10343 96.9 3e-15 seq7081 95.1 1e-14 >seq9680 Length=90248 Score = 102 bits (112), Expect = 8e-17 Identities = 137/191 (72%), Gaps = 0/191 (0%) Strand=Plus/Plus Query 131933 TCTTTTTGAATGTTGTAGTCGCTCATGGTACGCGAATCTTCGAGCTGTTTACCGGAATAG 131992 |||||||| ||||||||||| || || || |||||| | ||||| || | || Sbjct 41753 TCTTTTTGGATGTTGTAGTCAGACAATGTTCGACCATCTTCTAATTGTTTTCCAGCGAAG 41812 Query 131993 ATTAGACGCTGTTGATCTGGAGGTATGCCTTCTTTATCGGTAATTTTTTGTTTCAACTGT 132052 ||||| | |||||||||||| || |||||||| || || |||||| ||| | | | Sbjct 41813 ATTAGTCTCTGTTGATCTGGTGGAATGCCTTCCTTGTCTTGAATTTTGGCTTTAACATTT 41872 Query 132053 TCCACAGTATCGGTCGGCTCCACTTCGACCGTCAGCGTTTTACCAGTCAGAGTTTTTATG 132112 || | ||||| | | ||| ||||| | || | |||||||| || || ||||| | Sbjct 41873 TCAATGGTATCTGAAGACTCAACTTCAAGTGTAATTGTTTTACCCGTTAGGGTTTTAACA 41932 Query 132113 AAAATCTGCAT 132123 ||||||||||| Sbjct 41933 AAAATCTGCAT 41943 >seq10343 Length=31290 Score = 96.9 bits (106), Expect = 3e-15 Identities = 152/218 (70%), Gaps = 0/218 (0%) Strand=Plus/Minus Query 131906 AAGCGCAAAACCAAATGTATGTTTGACTCTTTTTGAATGTTGTAGTCGCTCATGGTACGC 131965 || || ||||||||||| | |||||||||||||||| || || || | ||||| Sbjct 25777 AATCGTAAAACCAAATGCAATGTTGACTCTTTTTGAATATTATAATCTGATAAAGTACGA 25718 Query 131966 GAATCTTCGAGCTGTTTACCGGAATAGATTAGACGCTGTTGATCTGGAGGTATGCCTTCT 132025 |||||| | || || || | | | || | ||||||||| ||||| || || |||||| Sbjct 25717 CCATCTTCCAATTGCTTGCCAGCAAAAATCAAACGCTGTTGGTCTGGTGGAATTCCTTCT 25658 Query 132026 TTATCGGTAATTTTTTGTTTCAACTGTTCCACAGTATCGGTCGGCTCCACTTCGACCGTC 132085 ||||| ||| ||| ||| | | ||| | || ||| | | ||| ||||| | || Sbjct 25657 TTATCTTGAATCTTTGATTTAACATTTTCAATAGAATCAGATGACTCAACTTCAAGTGTT 25598 Query 132086 AGCGTTTTACCAGTCAGAGTTTTTATGAAAATCTGCAT 132123 | ||||| || || | ||||| | || |||||||| Sbjct 25597 ATAGTTTTCCCTGTTAATGTTTTAACAAAGATCTGCAT 25560 >seq7081 Length=134943 Score = 95.1 bits (104), Expect = 1e-14 Identities = 148/212 (70%), Gaps = 0/212 (0%) Strand=Plus/Plus Query 131906 AAGCGCAAAACCAAATGTATGTTTGACTCTTTTTGAATGTTGTAGTCGCTCATGGTACGC 131965 || || ||||||||||| | | || || ||| |||| || || || || ||||| Sbjct 118572 AATCGTAAAACCAAATGGAGTGTAGATTCCTTTCGAATATTATAATCAGACAAAGTACGT 118631 Query 131966 GAATCTTCGAGCTGTTTACCGGAATAGATTAGACGCTGTTGATCTGGAGGTATGCCTTCT 132025 |||||| | ||||| || | | | || || | |||||||||||||| | |||||| Sbjct 118632 TCATCTTCTAATTGTTTGCCAGCAAAAATGAGTCTTTGTTGATCTGGAGGAAATCCTTCT 118691 Query 132026 TTATCGGTAATTTTTTGTTTCAACTGTTCCACAGTATCGGTCGGCTCCACTTCGACCGTC 132085 ||||| ||| ||| ||||| || ||| | ||| || | | || |||| || Sbjct 118692 TTATCTTGAATCTTTGCTTTCACCTTTTCAATAGTGTCACCTGATGCAACCTCGAGTGTA 118751 Query 132086 AGCGTTTTACCAGTCAGAGTTTTTATGAAAAT 132117 | ||||||||| |||| |||||| ||||| || Sbjct 118752 ATCGTTTTACCGGTCAAAGTTTTCATGAATAT 118783 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 476535049445520