Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Schmidtea_20mediterranea_20[genbank_20GCA_5F000691995.1_202014-05- 30] 12,782 sequences; 700,725,851 total letters Query= NC_026511.1 Length=140913 Score E Sequences producing significant alignments: (Bits) Value seq4271 93.3 4e-14 seq62 93.3 4e-14 seq3336 91.5 1e-13 seq7315 87.8 2e-12 seq12383 84.2 2e-11 seq9680 84.2 2e-11 seq4061 84.2 2e-11 seq2208 84.2 2e-11 seq7787 82.4 7e-11 seq7081 82.4 7e-11 >seq4271 Length=23865 Score = 93.3 bits (102), Expect = 4e-14 Identities = 153/221 (69%), Gaps = 0/221 (0%) Strand=Plus/Plus Query 35510 CCACCACGTAACCTCAACACCAAATGTAACGTACTCTCCTTTTGAATGTTGTAATCGGCC 35569 ||||| | ||| | || ||||||| | ||| ||||||||||| || ||||| | | Sbjct 1752 CCACCTCTTAATCGTAAACCCAAATGGAGTGTAGATTCCTTTTGAATATTATAATCAGAC 1811 Query 35570 AAGGTTCGCTCGTCGTCCAGCTGCTTACCCGCAAATATCAACCGCTGCTGGTCCGAAGGA 35629 ||||| | | | || || || || || ||||| || | | || || || ||||| Sbjct 1812 AAGGTATGTCCATTTTCTAGTTGTTTGCCAGCAAAAATGAGTCTTTGTTGATCAAAAGGA 1871 Query 35630 ACGCTCTCCTTGTCCATGATCTTTTGCTTCAGAGTTGCCACCGTGTCGCTCGATTCCACC 35689 | | || || || ||||||| |||| || | | ||||| | ||| | ||| Sbjct 1872 ATTCCTTCTTTATCTTGGATCTTTGCTTTCACCCTTTCAATGGTGTCACCTGATGCAACC 1931 Query 35690 TCCACCGTGATCGTTTTACCCGTCAAAGTTTTCACAAATAT 35730 || | || ||||||||||| |||||||||||||||||||| Sbjct 1932 TCGAGTGTAATCGTTTTACCGGTCAAAGTTTTCACAAATAT 1972 >seq62 Length=83120 Score = 93.3 bits (102), Expect = 4e-14 Identities = 159/228 (70%), Gaps = 2/228 (1%) Strand=Plus/Minus Query 35510 CCACCACGTAACCTCAACACCAAATGTAACGTACTCTCCTTTTGAATGTTGTAATCGGCC 35569 |||||||| | | | || | |||||| || || || ||||| |||||||| | Sbjct 2399 CCACCACGAAGTCGAAGTACTAGATGTAATGTGGATTCTTTCTGAATATTGTAATCAGAT 2340 Query 35570 AAGGTTCGCTCGTCGTCCAGCTGCTTACCCGCAAATATCAACCGCTGCTGGTCCGAAGGA 35629 || ||||| |||| || | || || || ||||| ||||| || ||||| || | |||| Sbjct 2339 AAAGTTCGTCCGTCTTCTAATTGTTTTCCGGCAAAAATCAATCGTTGCTGATCAGGAGGA 2280 Query 35630 ACGCTCTCCTTGTCCATGATCTTTTGCTTC-AGAGTTGCCACCGTGTCGCTCGATTCCAC 35688 | || || ||||| ||| ||| |||| | | || | | || ||| ||||| || Sbjct 2279 ATGCCTTCTTTGTCT-TGAATTTTGGCTTTTACATTTTCAATTGTATCGGAAGATTCAAC 2221 Query 35689 CTCCACCGTGATCGTTTTACCCGTCAAAGTTTTCACAAATATCTGCAT 35736 || | || || ||||||||||| | ||| |||||||| || ||||| Sbjct 2220 TTCAAGGGTTATTGTTTTACCCGTAAGAGTCTTCACAAAAATTTGCAT 2173 >seq3336 Length=143284 Score = 91.5 bits (100), Expect = 1e-13 Identities = 136/192 (71%), Gaps = 1/192 (1%) Strand=Plus/Plus Query 35546 TCCTTTTGAATGTTGTAATCGGCCAAGGTTCGCTCGTCGTCCAGCTGCTTACCCGCAAAT 35605 || || ||||| || ||||||| || ||||| | || || | ||||| || ||||| Sbjct 129089 TCTTTCTGAATATTATAATCGGATAAAGTTCGACCATCCTCTAATTGCTTTCCGGCAAAA 129148 Query 35606 ATCAACCGCTGCTGGTCCGAAGGAACGCTCTCCTTGTCCATGATCTTTTGCTTCAGAGTT 35665 || || | || || || | ||| || || |||||| ||||| ||||| | || Sbjct 129149 ATTAATCTTTGTTGATCAGGTAGAATTCT-TCTTTGTCCTGAATCTTAGCCTTCATATTT 129207 Query 35666 GCCACCGTGTCGCTCGATTCCACCTCCACCGTGATCGTTTTACCCGTCAAAGTTTTCACA 35725 | | || ||||| ||||| || |||| || || || ||||| || | |||||| ||| Sbjct 129208 TCGATTGTATCGCTTGATTCAACTTCCAAAGTTATTGTCTTACCAGTAAGAGTTTTAACA 129267 Query 35726 AATATCTGCATT 35737 |||||||||||| Sbjct 129268 AATATCTGCATT 129279 Score = 91.5 bits (100), Expect = 1e-13 Identities = 136/192 (71%), Gaps = 1/192 (1%) Strand=Plus/Plus Query 35546 TCCTTTTGAATGTTGTAATCGGCCAAGGTTCGCTCGTCGTCCAGCTGCTTACCCGCAAAT 35605 || || ||||| || ||||||| || ||||| | || || | ||||| || ||||| Sbjct 130599 TCTTTCTGAATATTATAATCGGATAAAGTTCGACCATCCTCTAATTGCTTTCCGGCAAAA 130658 Query 35606 ATCAACCGCTGCTGGTCCGAAGGAACGCTCTCCTTGTCCATGATCTTTTGCTTCAGAGTT 35665 || || | || || || | ||| || || |||||| ||||| ||||| | || Sbjct 130659 ATTAATCTTTGTTGATCAGGTAGAATTCT-TCTTTGTCCTGAATCTTAGCCTTCATATTT 130717 Query 35666 GCCACCGTGTCGCTCGATTCCACCTCCACCGTGATCGTTTTACCCGTCAAAGTTTTCACA 35725 | | || ||||| ||||| || |||| || || || ||||| || | |||||| ||| Sbjct 130718 TCGATTGTATCGCTTGATTCAACTTCCAAAGTTATTGTCTTACCAGTAAGAGTTTTAACA 130777 Query 35726 AATATCTGCATT 35737 |||||||||||| Sbjct 130778 AATATCTGCATT 130789 >seq7315 Length=10968 Score = 87.8 bits (96), Expect = 2e-12 Identities = 152/221 (69%), Gaps = 0/221 (0%) Strand=Plus/Plus Query 35510 CCACCACGTAACCTCAACACCAAATGTAACGTACTCTCCTTTTGAATGTTGTAATCGGCC 35569 ||||| | ||| | || |||||||| | |||| ||||||||||| | |||| | | Sbjct 2992 CCACCTCTTAATCGTAAAACCAAATGAAGTGTACATTCCTTTTGAATAATATAATAAGAC 3051 Query 35570 AAGGTTCGCTCGTCGTCCAGCTGCTTACCCGCAAATATCAACCGCTGCTGGTCCGAAGGA 35629 || || || | || || | || || || ||||| || | | || || || | |||| Sbjct 3052 AAAGTACGTCCTTCTTCTAATTGTTTGCCAGCAAAAATGAGTCTTTGTTGATCGGGAGGA 3111 Query 35630 ACGCTCTCCTTGTCCATGATCTTTTGCTTCAGAGTTGCCACCGTGTCGCTCGATTCCACC 35689 | | || || || |||||| |||| || | | ||||| | ||| | ||| Sbjct 3112 AATCCTTCTTTATCTTGAATCTTTGCTTTCACCTTTTCAATGGTGTCACCTGATGCAACC 3171 Query 35690 TCCACCGTGATCGTTTTACCCGTCAAAGTTTTCACAAATAT 35730 || | || ||||||||||| |||||||||||||||||||| Sbjct 3172 TCGAAAGTAATCGTTTTACCGGTCAAAGTTTTCACAAATAT 3212 >seq12383 Length=19971 Score = 84.2 bits (92), Expect = 2e-11 Identities = 151/221 (68%), Gaps = 0/221 (0%) Strand=Plus/Plus Query 35510 CCACCACGTAACCTCAACACCAAATGTAACGTACTCTCCTTTTGAATGTTGTAATCGGCC 35569 ||||| | ||| | || ||||||| | ||| ||||||||||| || ||||| | | Sbjct 8163 CCACCTCTTAATCGTAAACCCAAATGGAGTGTAGATTCCTTTTGAATATTATAATCAGAC 8222 Query 35570 AAGGTTCGCTCGTCGTCCAGCTGCTTACCCGCAAATATCAACCGCTGCTGGTCCGAAGGA 35629 || || || | || || | || || || ||||| || | | || || || | |||| Sbjct 8223 AAAGTACGTCCATCTTCTAATTGTTTGCCAGCAAAAATGAGTCTTTGTTGATCGGGAGGA 8282 Query 35630 ACGCTCTCCTTGTCCATGATCTTTTGCTTCAGAGTTGCCACCGTGTCGCTCGATTCCACC 35689 | | || || || |||||| |||| || | | ||||| | ||| | ||| Sbjct 8283 AATCCTTCTTTATCTTGAATCTTTGCTTTCACCTTTTCAATGGTGTCACCTGATGCAACC 8342 Query 35690 TCCACCGTGATCGTTTTACCCGTCAAAGTTTTCACAAATAT 35730 || | || ||||||||||| ||||||||||||||||||| Sbjct 8343 TCGAGTGTAATCGTTTTACCGTTCAAAGTTTTCACAAATAT 8383 >seq9680 Length=90248 Score = 84.2 bits (92), Expect = 2e-11 Identities = 148/213 (69%), Gaps = 2/213 (1%) Strand=Plus/Plus Query 35528 ACCAAATGTAACGTACTCTCCTTTTGAATGTTGTAATCGGCCAAGGTTCGCTCGTCGTCC 35587 |||||||| | ||||| || ||||| |||||||| || | ||| ||||| | || || Sbjct 41735 ACCAAATGGAGAGTACTTTCTTTTTGGATGTTGTAGTCAGACAATGTTCGACCATCTTCT 41794 Query 35588 AGCTGCTTACCCGCAAATATCAACCGCTGCTGGTCCGAAGGAACGCTCTCCTTGTCCATG 35647 | || || || || || || | | ||| || || | |||| || |||||||| || Sbjct 41795 AATTGTTTTCCAGCGAAGATTAGTCTCTGTTGATCTGGTGGAATGCCTTCCTTGTCT-TG 41853 Query 35648 ATCTTTTGCTTCAG-AGTTGCCACCGTGTCGCTCGATTCCACCTCCACCGTGATCGTTTT 35706 | ||| |||| | | || | | || || || || || || | || || ||||| Sbjct 41854 AATTTTGGCTTTAACATTTTCAATGGTATCTGAAGACTCAACTTCAAGTGTAATTGTTTT 41913 Query 35707 ACCCGTCAAAGTTTTCACAAATATCTGCATTCT 35739 |||||| | ||||| ||||| ||||||||||| Sbjct 41914 ACCCGTTAGGGTTTTAACAAAAATCTGCATTCT 41946 >seq4061 Length=86116 Score = 84.2 bits (92), Expect = 2e-11 Identities = 151/221 (68%), Gaps = 0/221 (0%) Strand=Plus/Plus Query 35510 CCACCACGTAACCTCAACACCAAATGTAACGTACTCTCCTTTTGAATGTTGTAATCGGCC 35569 ||||| | ||| | || ||||||| | ||| ||||||||||| || ||||| | | Sbjct 51702 CCACCTCTTAATCGTAAACCCAAATGGAGTGTAGATTCCTTTTGAATATTATAATCAGAC 51761 Query 35570 AAGGTTCGCTCGTCGTCCAGCTGCTTACCCGCAAATATCAACCGCTGCTGGTCCGAAGGA 35629 || || || | || || | || || || ||||| || | | || || || | |||| Sbjct 51762 AAAGTACGTCCATCTTCTAATTGTTTGCCAGCAAAAATGAGTCTTTGTTGATCGGGAGGA 51821 Query 35630 ACGCTCTCCTTGTCCATGATCTTTTGCTTCAGAGTTGCCACCGTGTCGCTCGATTCCACC 35689 | | || || || |||||| |||| || | | ||||| | ||| | ||| Sbjct 51822 AATCCTTCTTTATCTTGAATCTTTGCTTTCACCTTTTCAATGGTGTCACCTGATGCAACC 51881 Query 35690 TCCACCGTGATCGTTTTACCCGTCAAAGTTTTCACAAATAT 35730 || | || ||||||||||| ||||||||||||||||||| Sbjct 51882 TCGAGTGTAATCGTTTTACCGTTCAAAGTTTTCACAAATAT 51922 >seq2208 Length=35245 Score = 84.2 bits (92), Expect = 2e-11 Identities = 146/210 (70%), Gaps = 2/210 (1%) Strand=Plus/Plus Query 35521 CCTCAACACCAAATGTAACGTACTCTCCTTTTGAATGTTGTAATCGGCCAAGGTTCGCTC 35580 ||| ||| ||||||| | | | |||||||||||||| ||||| | ||| || || | Sbjct 34795 CCTAAAC-CCAAATGGAGTGCAGATTCCTTTTGAATGTTATAATCAGACAAAGTCCGTTA 34853 Query 35581 GTCGTCCAGCTGCTTACCCGCAAATATCAACCGCTGCTGGTCCGAAGGAACGCTCTCCTT 35640 || || | || || || ||||| || | | || || || | ||||| | | || Sbjct 34854 -TCTTCTAATTGTTTGCCAGCAAAAATTAGTCTTTGTTGATCGGGAGGAAATCCTTATTT 34912 Query 35641 GTCCATGATCTTTTGCTTCAGAGTTGCCACCGTGTCGCTCGATTCCACCTCCACCGTGAT 35700 || |||||| ||||| || | | ||||| | |||||| ||||| | || || Sbjct 34913 ATCTTGAATCTTTGCCTTCACCTTTTCAATGGTGTCACCCGATTCAACCTCGAGTGTAAT 34972 Query 35701 CGTTTTACCCGTCAAAGTTTTCACAAATAT 35730 || |||||| ||||||||||||||||||| Sbjct 34973 CGATTTACCGTTCAAAGTTTTCACAAATAT 35002 >seq7787 Length=20266 Score = 82.4 bits (90), Expect = 7e-11 Identities = 152/223 (68%), Gaps = 0/223 (0%) Strand=Plus/Plus Query 35508 TTCCACCACGTAACCTCAACACCAAATGTAACGTACTCTCCTTTTGAATGTTGTAATCGG 35567 ||||||| | ||| | || ||||||| | ||| ||||||||||| || ||||| | Sbjct 11496 TTCCACCTCTTAATCGTAAACCCAAATGGAGTGTAGATTCCTTTTGAATATTATAATCAG 11555 Query 35568 CCAAGGTTCGCTCGTCGTCCAGCTGCTTACCCGCAAATATCAACCGCTGCTGGTCCGAAG 35627 ||| || || | || || | || || || ||||| || | | || || || | || Sbjct 11556 ACAAAGTACGTCCATCTTCTAATTGTTTGCCAGCAAAAATGAGTCTTTGTTGATCGGGAG 11615 Query 35628 GAACGCTCTCCTTGTCCATGATCTTTTGCTTCAGAGTTGCCACCGTGTCGCTCGATTCCA 35687 ||| | || | || |||||| |||| || | | ||||| | ||| | | Sbjct 11616 GAAATCCTTCTATATCTTGAATCTTTGCTTTCACTTTTTCAATGGTGTCACCTGATGCAA 11675 Query 35688 CCTCCACCGTGATCGTTTTACCCGTCAAAGTTTTCACAAATAT 35730 |||| | || ||||||||||| ||||||||||||||||||| Sbjct 11676 CCTCGAGTGTAATCGTTTTACCTTTCAAAGTTTTCACAAATAT 11718 >seq7081 Length=134943 Score = 82.4 bits (90), Expect = 7e-11 Identities = 150/220 (68%), Gaps = 0/220 (0%) Strand=Plus/Plus Query 35511 CACCACGTAACCTCAACACCAAATGTAACGTACTCTCCTTTTGAATGTTGTAATCGGCCA 35570 |||| | ||| | || |||||||| | ||| |||||| |||| || ||||| | || Sbjct 118564 CACCTCTTAATCGTAAAACCAAATGGAGTGTAGATTCCTTTCGAATATTATAATCAGACA 118623 Query 35571 AGGTTCGCTCGTCGTCCAGCTGCTTACCCGCAAATATCAACCGCTGCTGGTCCGAAGGAA 35630 | || || || || || | || || || ||||| || | | || || || | ||||| Sbjct 118624 AAGTACGTTCATCTTCTAATTGTTTGCCAGCAAAAATGAGTCTTTGTTGATCTGGAGGAA 118683 Query 35631 CGCTCTCCTTGTCCATGATCTTTTGCTTCAGAGTTGCCACCGTGTCGCTCGATTCCACCT 35690 | || || || |||||| |||| || | | ||||| | ||| | |||| Sbjct 118684 ATCCTTCTTTATCTTGAATCTTTGCTTTCACCTTTTCAATAGTGTCACCTGATGCAACCT 118743 Query 35691 CCACCGTGATCGTTTTACCCGTCAAAGTTTTCACAAATAT 35730 | | || ||||||||||| ||||||||||||| ||||| Sbjct 118744 CGAGTGTAATCGTTTTACCGGTCAAAGTTTTCATGAATAT 118783 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 450721574452560