Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Schmidtea_20mediterranea_20[genbank_20GCA_5F000691995.1_202014-05- 30] 12,782 sequences; 700,725,851 total letters Query= NC_027995.1 Length=41666 Score E Sequences producing significant alignments: (Bits) Value seq6794 165 2e-36 >seq6794 Length=1050243 Score = 165 bits (182), Expect = 2e-36 Identities = 487/741 (66%), Gaps = 15/741 (2%) Strand=Plus/Minus Query 8791 AGCGCAAAGCTGGCTTCCAGCTTTTCCATGCCCAACGTCACATCAATGGGCGCGTCCATG 8850 |||| ||||| || |||| ||| |||||||||| || | | || ||||| ||||| Sbjct 612493 AGCGAGAAGCTCGCCTCCAACTTCTCCATGCCCAGCGCGATAGACATCGGCGCATCCATA 612434 Query 8851 CCGCCTGCGCGGAATTCTTCGGTTTGCAGGGTTAAGGTGGGCGGCGTGACGCTCTCCACC 8910 ||||| ||| | |||||| |||| | | | |||||||||||| || | Sbjct 612433 CCGCCGCAGCGAATTTCTTCAGTTTTTAAAGCGAGCTTGGGCGGCGTGAATTCTTCAATT 612374 Query 8911 TGGCCCGCGTAACCACGGCCATCAACAAATAAGTTGATGTTTTTCAAAACGTCACGTGCG 8970 || |||||||| | ||| || || || || || | ||| || ||| ||| Sbjct 612373 TGACCCGCGTAGCTCGTGCCGTCTACGAACAAATTAAAGTTACGGCGAATGTCGTTTGCA 612314 Query 8971 GCCATTATTCGAATACCTCACTAATATAATCGTTGGTCAATTGGCTGCGGAAGATAATGT 9030 ||||| || | |||||| | |||||| ||| ||| | |||||| | ||||| Sbjct 612313 GCCATATTTATAGCACCTCAGATAGATAATCTTTGTTCATGTATGAGCGGAAAACAATGT 612254 Query 9031 GTTCAGCCGG-ATAAACAGGCGTGAAATCAAAATCAAAGTATACCTTACCATCCGC--GA 9087 | || || || || | ||| |||||||| || || || || | || | || Sbjct 612253 GCTCGGCAGGCATTGGC-GGCACAAAATCAAAGTCGAAATAGGCCATGCCGCTAGATAGA 612195 Query 9088 TCTGGTCAGCAGTATTTAAGTC---AGGGTCAGCCCAACACGTGCCGCCAAGAATTGCGC 9144 | || ||| | ||| | | | | | | ||||| ||| |||| || ||||| | Sbjct 612194 TTTG--CAGGCGAATTCAGGCCGCTATCGGCCGCCCAGCACTTGCCATTAATGATTGCTC 612137 Query 9145 CCAGGCTCACCAGGTTGCGCAGGTACGCGTTCACGCCTTCAATCACGTCATTGACGTATT 9204 | | | | | ||||||||||||| |||||||| || || || || | |||| Sbjct 612136 CTTGTGTTTTTAAGCTGCGCAGGTACGCATTCACGCCGTCTGCAACATCTTTTAAATATT 612077 Query 9205 GTTTGGTGATGCCACGGTCTACGGCCCACAGGTGTGCACGCAGCAGACTGTCATTGATGA 9264 | ||| ||||||| | ||| || ||||| || || |||| || ||||| || || | Sbjct 612076 GCTTGTTGATGCCTCTGTCCACAGCCCAAAGATGGTTGCGCACGAGGCTGTCGTTAATCA 612017 Query 9265 TGTCAGCCGTGCGAACCACGCACAGGAACGCCCATTTCTGATCGCTGGAACAGGTGCGGT 9324 |||| ||||| || ||| | | ||||||||| ||||| ||||| ||| | ||||| Sbjct 612016 TGTCCGCCGTACGTCGCACCGATAAGAACGCCCAATTCTGGTCGCTTGAAAGCGAGCGGT 611957 Query 9325 TGCCCCACAGGCGGAAACCGTCCTGGCGAATGATGGTGGTGACTTCGTTTTCATTCAGCA 9384 | ||||||| | ||| |||| || |||| | |||| || | | | |||| Sbjct 611956 TCCCCCACAACCTGAATCCGTTTTGCCGAACAACGGTGCCCACCTTGGCCGCGTTCAATT 611897 Query 9385 GGTTTGCACGGCTGGATGTGTCACCCAGGGTGAAATCAATGGTTCGGGCCGTGCCCTGGA 9444 |||| || |||| | | ||| || | |||||||||| |||||||||||| | Sbjct 611896 GGTTGGCGCGGCAAGCGGGGTCGTTAAGCGCAAAATCAATGGGGCGGGCCGTGCCCACAA 611837 Query 9445 TGCCATAGATTTCCTGGTTTGAT--GGTGACCACCAGAAACCGCGC-TCGTTGTCGATGC 9501 |||||| ||| | || ||| | || ||||| ||||| | | ||||| || | || Sbjct 611836 TGCCATTTATTAATTTATTCGATAAGCTG--CACCA-AAACCCCTCATCGTTATCAACGC 611780 Query 9502 GGGCAATCAGACCAGCCACGC 9522 ||||||| | |||||| ||| Sbjct 611779 GGGCAATAATGCCAGCCGCGC 611759 Score = 165 bits (182), Expect = 2e-36 Identities = 487/741 (66%), Gaps = 15/741 (2%) Strand=Plus/Minus Query 8791 AGCGCAAAGCTGGCTTCCAGCTTTTCCATGCCCAACGTCACATCAATGGGCGCGTCCATG 8850 |||| ||||| || |||| ||| |||||||||| || | | || ||||| ||||| Sbjct 614838 AGCGAGAAGCTCGCCTCCAACTTCTCCATGCCCAGCGCGATAGACATCGGCGCATCCATA 614779 Query 8851 CCGCCTGCGCGGAATTCTTCGGTTTGCAGGGTTAAGGTGGGCGGCGTGACGCTCTCCACC 8910 ||||| ||| | |||||| |||| | | | |||||||||||| || | Sbjct 614778 CCGCCGCAGCGAATTTCTTCAGTTTTTAAAGCGAGCTTGGGCGGCGTGAATTCTTCAATT 614719 Query 8911 TGGCCCGCGTAACCACGGCCATCAACAAATAAGTTGATGTTTTTCAAAACGTCACGTGCG 8970 || |||||||| | ||| || || || || || | ||| || ||| ||| Sbjct 614718 TGACCCGCGTAGCTCGTGCCGTCTACGAACAAATTAAAGTTACGGCGAATGTCGTTTGCA 614659 Query 8971 GCCATTATTCGAATACCTCACTAATATAATCGTTGGTCAATTGGCTGCGGAAGATAATGT 9030 ||||| || | |||||| | |||||| ||| ||| | |||||| | ||||| Sbjct 614658 GCCATATTTATAGCACCTCAGATAGATAATCTTTGTTCATGTATGAGCGGAAAACAATGT 614599 Query 9031 GTTCAGCCGG-ATAAACAGGCGTGAAATCAAAATCAAAGTATACCTTACCATCCGC--GA 9087 | || || || || | ||| |||||||| || || || || | || | || Sbjct 614598 GCTCGGCAGGCATTGGC-GGCACAAAATCAAAGTCGAAATAGGCCATGCCGCTAGATAGA 614540 Query 9088 TCTGGTCAGCAGTATTTAAGTC---AGGGTCAGCCCAACACGTGCCGCCAAGAATTGCGC 9144 | || ||| | ||| | | | | | | ||||| ||| |||| || ||||| | Sbjct 614539 TTTG--CAGGCGAATTCAGGCCGCTATCGGCCGCCCAGCACTTGCCATTAATGATTGCTC 614482 Query 9145 CCAGGCTCACCAGGTTGCGCAGGTACGCGTTCACGCCTTCAATCACGTCATTGACGTATT 9204 | | | | | ||||||||||||| |||||||| || || || || | |||| Sbjct 614481 CTTGTGTTTTTAAGCTGCGCAGGTACGCATTCACGCCGTCTGCAACATCTTTTAAATATT 614422 Query 9205 GTTTGGTGATGCCACGGTCTACGGCCCACAGGTGTGCACGCAGCAGACTGTCATTGATGA 9264 | ||| ||||||| | ||| || ||||| || || |||| || ||||| || || | Sbjct 614421 GCTTGTTGATGCCTCTGTCCACAGCCCAAAGATGGTTGCGCACGAGGCTGTCGTTAATCA 614362 Query 9265 TGTCAGCCGTGCGAACCACGCACAGGAACGCCCATTTCTGATCGCTGGAACAGGTGCGGT 9324 |||| ||||| || ||| | | ||||||||| ||||| ||||| ||| | ||||| Sbjct 614361 TGTCCGCCGTACGTCGCACCGATAAGAACGCCCAATTCTGGTCGCTTGAAAGCGAGCGGT 614302 Query 9325 TGCCCCACAGGCGGAAACCGTCCTGGCGAATGATGGTGGTGACTTCGTTTTCATTCAGCA 9384 | ||||||| | ||| |||| || |||| | |||| || | | | |||| Sbjct 614301 TCCCCCACAACCTGAATCCGTTTTGCCGAACAACGGTGCCCACCTTGGCCGCGTTCAATT 614242 Query 9385 GGTTTGCACGGCTGGATGTGTCACCCAGGGTGAAATCAATGGTTCGGGCCGTGCCCTGGA 9444 |||| || |||| | | ||| || | |||||||||| |||||||||||| | Sbjct 614241 GGTTGGCGCGGCAAGCGGGGTCGTTAAGCGCAAAATCAATGGGGCGGGCCGTGCCCACAA 614182 Query 9445 TGCCATAGATTTCCTGGTTTGAT--GGTGACCACCAGAAACCGCGC-TCGTTGTCGATGC 9501 |||||| ||| | || ||| | || ||||| ||||| | | ||||| || | || Sbjct 614181 TGCCATTTATTAATTTATTCGATAAGCTG--CACCA-AAACCCCTCATCGTTATCAACGC 614125 Query 9502 GGGCAATCAGACCAGCCACGC 9522 ||||||| | |||||| ||| Sbjct 614124 GGGCAATAATGCCAGCCGCGC 614104 Score = 149 bits (164), Expect = 2e-31 Identities = 205/282 (73%), Gaps = 6/282 (2%) Strand=Plus/Minus Query 21217 GTAGCCAACGGAAACATGCTTGCGAATGCCGTCAACGATGTCCTGGAAAATCTCGTCAGC 21276 ||| || |||||||||||||| | |||||||| ||||| | ||| || || || || Sbjct 602208 GTAACCCACGGAAACATGCTTTCTTATGCCGTCTTTAATGTCATTGAATATTTCATCGGC 602149 Query 21277 GCGCGCACTTCTGCCAAAGCGCACCACAGCCCGCCCCCGGCGGTCAGCGTCAATGCTGAC 21336 |||||||||| |||||||||||||||||||||||||||||||| |||||||| || Sbjct 602148 CAGCGCACTTCTCCCAAAGCGCACCACAGCCCGCCCCCGGCGGTCTGCGTCAATCGAAAC 602089 Query 21337 GGATTCAACAACGCCCACCTGGTCAGTCCAATCGTGGTCAACCAGCAGCGCCCCACCGTC 21396 ||||| || |||| ||| | ||||||| || | |||||| | | ||||||| Sbjct 602088 ACTCTCAACGACCCCCAATTGGCGGCGCGAATCGTGATCCAACAGCAGTGGCGCACCGTC 602029 Query 21397 ACGCAGACGGTCTAGGCGCACG-CTTTCCGGC--GAATGGTCCAGAATTTCGATACCGTA 21453 || | | ||| | ||| || | | || ||||| || ||||| | ||||| Sbjct 602028 -TACAATCCGGCTA--AGAACGACTGCGCCACTAGAGTGGTCGAGGATTTCAACGCCGTA 601972 Query 21454 CCAGCGTTCAACCTCGATTTCAGAGGAAAAAGCCAGTTCTAC 21495 |||||| ||||| || ||| ||||||||||| || || || Sbjct 601971 CCAGCGCTCAACTTCTGCTTCTGAGGAAAAAGCGAGCTCAAC 601930 Score = 125 bits (138), Expect = 2e-24 Identities = 692/1089 (64%), Gaps = 61/1089 (6%) Strand=Plus/Minus Query 21939 CGTCCTTTAACGGTGATGCGGCCAGCAAGCAGGGCACGCGGCAACCATGCTTCAAAAACT 21998 || || || || | |||| | || | || || || |||||||||| |||||||| ||| Sbjct 600906 CGCCCATTTACCGCGATGTGCCCGCCCAGTAGCGCTAGCGGCAACCACGCTTCAAACACT 600847 Query 21999 GGTTGATGCAGGTTTTCAATCAACCATTCCTGCAATTCTTTCCAGTTTTCTCGGCTGTCT 22058 || || || |||||| | ||| || |||| ||||||||| | || || |||| Sbjct 600846 GGCTGCACCAAACATTCAATGAGCCACTCTTGCATTTCTTTCCAATGCTCGCGCTCGTCT 600787 Query 22059 AGCGTTCCCTGGCGGATAGAGCT---GAAATTGACGCCTTCCAGGTCGCTGGCAAGGTCA 22115 | ||| ||||| | ||| ||| ||||||||| || | |||| |||| | | Sbjct 600786 AACGTCCCCTGCCTGAT---GCTTGAGAAATTGACATTCTCTAAGTCGTTGGCTAAATTG 600730 Query 22116 TTATATGGAACACCCATACCCGATGCCATGCCGCGCAGCATTTGTTTGGTGAACACGGCA 22175 || || | || || | |||| | |||||||||||||| |||| | |||| | Sbjct 600729 TTGTAAAGCACGCCAAAGCCCGCCGATATGCCGCGCAGCATGGCTTTGTTAAACAACATA 600670 Query 22176 AATTCGCCGTTTGGGTATTGTGGCGACCAGTCTTTGACGCGT--GCGCCCTGTGGCAGAA 22233 ||||| ||| | |||||||| || ||| || |||| | ||||||| ||||| | Sbjct 600669 AATTCACCGCTGGGGTATTGCGGGTTCCATTC--TGACAATTCCGCGCCCTCCGGCAGGA 600612 Query 22234 TCTGGAATTCACCCG-------GTTCACTGTCAATGATCAGTTCATCATCATCTTCAAAC 22286 | || || || | ||||| | |||| | | || || || || | | Sbjct 600611 TTGAAAACTCCCCAGGCTCTGCGTTCA-TCTCAAAGTTGGCGCGGTCTTCGTCGTCCATC 600553 Query 22287 TCAGGAC--CAGCGGAATTTTCATCCCATTCGATGAATCCCATTTTGTTGGCACCGGCGC 22344 || || | | || | || | ||| | || | |||||||| || || | Sbjct 600552 TCTGGCCCTCTGCCG-----TCTTTCCACTGAATCACGCCCATTTTCGATGCGCCAATTC 600498 Query 22345 GCGCGTTGACCAGCGCGGCTTCTTCCATGCCACCCAGGTGGCGCATACGAAACAGGCTGG 22404 | ||||| |||||||| || ||||| | ||| || ||||| ||| | || | | Sbjct 600497 GAGCGTTCACCAGCGCAGCGTCTTCAAAGCCTTTGAGCATGCGCAGGCGATAAAGCCCCG 600438 Query 22405 TGGCCATCCACGGAAGGCCGCGTTTCTGCCCCACCATGTCATCCAGGAAGCCGTGAAGGA 22464 | |||||||| || || ||||| || |||||||| || ||| | |||||||||| | Sbjct 600437 TCGCCATCCATGGGAGACCGCGCTTTTGCCCCACAATTTCAGGTAAAAAGCCGTGAATAA 600378 Query 22465 TTTCATCAGCGGGAATTCGCACGAAATCACGCCCGGACCAACGGTAGTTAT---CATTGG 22521 | ||||| || || ||| | || | || || || | |||||| | | | Sbjct 600377 TCTCATCCGCTGG----CGC-CCTTATAAAGCTCGTGCC-GCCGTAGTTGTAGGCGTAAA 600324 Query 22522 ATTCATCAACCGTGCT---------GAAATAGTACGCAACAGGCCGCCCGTAGCGATTAA 22572 | | || | ||| ||| | || || | ||| || | || | Sbjct 600323 CTGCGTCGCGCTCGCTCTCAATTTGGAAGTGATAGGCCAGCGGCTTGCCCCACTTGTTGA 600264 Query 22573 ACTCGATGCCCTGGCGGATGAAATTTCCGTTATTCAGACGATCTTCAACCATGTC-AACA 22631 | |||||||| | ||||||||| |||||| ||| | ||| || | ||| ||| Sbjct 600263 ATTCGATGCCGCTTCTGATGAAATTGCCGTTA-TCAAA--ATC--GAAGC-GGTCAAACT 600210 Query 22632 GGG-----CAGCGTTGCGGGTCCAGCAGTTGCAGCGCGAAGCCCCACGGCCCTGCATCGG 22686 | | || || ||||||||||||| ||||||||| ||||| | || || | || Sbjct 600209 GCGGATTACAACGCTGCGGGTCCAGCACTTGCAGCGCAAAGCCGAATGGTCCAGATTCTT 600150 Query 22687 CACCGAACACCAGGCGCACGAAGAATTCACCATCTTTAGCCGTGCTG--TTGACGCAGGC 22744 |||| | ||||| | || || |||||||| | |||| | ||||| | Sbjct 600149 TGCCGACGATTTTGCGCAGCATAAACTCCCCATCTTT--CACGGCTGACATCACGCAAGA 600092 Query 22745 AGCCTGGATGGCGCGCCAGGATAACTTCCCTGTCACGTCGC-AGTTTGACTTGTGCCCCC 22803 |||||| | | |||||| || | || | | ||||| || | | ||| | || Sbjct 600091 AGCCTGCAAGCTGCGCCACGACTGTATACCCGCTATGTCGCAAGAATCGC-GGTGGCTCC 600033 Query 22804 ACTTATCGAAGGCCGTTTCAATGGCTTCGTTGGCCAGGGTGTCCAGTTTCCCGGTGTTGT 22863 | ||| | ||| ||| ||||| | ||||| ||||| || ||| || ||| || Sbjct 600032 AGGCATCCCACGCCTCTTCTATGGCGTTATTGGCGAGGGTATCGAGTGCGCCTTTGTCGT 599973 Query 22864 CAGTGCTTTTGGCCTGCAACAGAACGCCTTTTGGACCAACAATATTGTTGCGGCACAGGC 22923 | | || || |||| || |||||||| || || || || | |||||||| || Sbjct 599972 CCTTTGATTGAGCTTGCAGCATCACGCCTTTATTGCCGACGATGTTTTGGCGGCACATGC 599913 Query 22924 GCAGGAACTTTTTGGCATAATCATTGTTGGCGGCCTGCTCGCGGGAACGCGCCACCAGGA 22983 ||| || ||| ||||| || || || || ||||||| || || |||||||| || | Sbjct 599912 GCACAAAGGCTTTTGCATAGTCGTTATTCGCCACCTGCTCACGAGACCGCGCCACAAGTA 599853 Query 22984 TGCGTTGAT 22992 ||||||||| Sbjct 599852 TGCGTTGAT 599844 Score = 109 bits (120), Expect = 1e-19 Identities = 210/303 (69%), Gaps = 10/303 (3%) Strand=Plus/Minus Query 16149 GCGTAGGCCAGCATGATGGCTTTGGCGGCCTCATTGACGC-GATGACGCATCAGCAGTTC 16207 || ||||||| ||| | | ||| || || || || || | | || || || ||||| || Sbjct 607069 GCATAGGCCACCATTACCGATTTAGCAGCTTCGTTAACTCTGCTG-CGGATGAGCAGCTC 607011 Query 16208 ACGATAGGCGCAAACCTCCAGAACCTTATAAGCCGGATCAGATTCCACCAGTGCGGTGAA 16267 || |||||||| |||| || || |||| |||| || || || ||| || | || Sbjct 607010 GCGGTAGGCGCACACCTGCAAAATCTTAAAAGCTGGGTCGCTCTCAGTCAGCGCATTAAA 606951 Query 16268 TGTGGGGTCACGCTCCTGTAAGTCGGCAATCATGGCCGCCAGGATAGTTTCGAAGTCCAG 16327 | | |||||| | | ||| ||||| | |||||| || | || ||| || ||||| Sbjct 606950 AGCCGCATCACGCACTTTTAAATCGGCCAGCATGGCAGCAAAAATGACTTCAAAATCCAG 606891 Query 16328 CGATTCAACAACGTTTGGCGCTGGTAATTGA--GATAAGTTTACAACTGTGAAGGCACCC 16385 || |||||||| ||||||| || ||||| |||| | |||| ||| ||| | Sbjct 606890 CGCCTCAACAACAGTTGGCGCGGGCAATTGGCTGATA--TCTACACTTGTAAAGTCT--- 606836 Query 16386 GCCATTTATGTCACCACTATGCCATCAATCGTTATTTGTTTGCCGTCTGGCAGGTATTCG 16445 |||||| || | ||| | ||||| ||||| | | || |||||||||||||| || || Sbjct 606835 GCCATT-ATTTGACCTCGATGCCTTCAATGCTGACCTGCTTGCCGTCTGGCAGATAAACG 606777 Query 16446 CCG 16448 ||| Sbjct 606776 CCG 606774 Score = 107 bits (118), Expect = 5e-19 Identities = 148/207 (71%), Gaps = 0/207 (0%) Strand=Plus/Minus Query 19621 GCGGCGCACAGCAAAATCCACGTCCTGGAATACCACGATGCGCAGGCCACCGGATTTGCT 19680 ||||||||| |||||||| | ||| ||||||| | | ||| | || || || ||| Sbjct 603669 GCGGCGCACTGCAAAATCAATGTCTTGGAATATCGTCACGCGGATGCGTCCCTTTTGGCT 603610 Query 19681 CAGGCTGTACGGGTCAACCGTCATGTCCAGGCCGCCCCACATACCAACAACCAGGTCAGC 19740 ||||||||||||| || || || | |||||||||||| |||| | || ||| || Sbjct 603609 TTGGCTGTACGGGTCTACATGCAGCTCTAAGCCGCCCCACATGCCAATGAGCAAGTCGGC 603550 Query 19741 GAAGTTGCCAAAGAACACGTCACCATCCTGCACCTGGTTGGTTACTTCGGCGCGGTAGCC 19800 |||||| |||||||||||||| ||| | | | ||||| | || | | || || Sbjct 603549 GAAGTTACCAAAGAACACGTCGCCAGCATTGATTTGGTTAGACACAAGAGATTGATAACC 603490 Query 19801 GTTCAGGGTGTTGCCCGGTTCCCAAAT 19827 || | ||||||||| | |||||||| Sbjct 603489 ATTTATGGTGTTGCCAGCCTCCCAAAT 603463 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 133189380614352