Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Schmidtea_20mediterranea_20[genbank_20GCA_5F000691995.1_202014-05- 30] 12,782 sequences; 700,725,851 total letters Query= NC_028092.1 Length=193301 Score E Sequences producing significant alignments: (Bits) Value seq4842 118 1e-21 >seq4842 Length=204163 Score = 118 bits (130), Expect = 1e-21 Identities = 237/347 (68%), Gaps = 6/347 (2%) Strand=Plus/Plus Query 14005 GTGGACACCCAAAATCTTCTCGCGACCGCGCACACTGGGTAGGGACACGGTGATCTTAC- 14063 ||| ||| |||||| | ||||| || || | | ||||||| ||| | | ||| | Sbjct 30223 GTGAACATTCAAAATTTGTTCGCGTCCACGAATATCAGGTAGGGTGACG-TAAACTTGCC 30281 Query 14064 GATCAAAGCGACCTGGGCGGAGGAGGGCGTCGTCAAGGATATCAATGCGGTTCGTCGCCG 14123 | ||||| || || || || || | || | ||| | |||||| ||| || || || | Sbjct 30282 GGTCAAAACGCCCCGGACGAAGCAACGCTTGGTCCAAAATATCAGGGCGATTGGTTGCGG 30341 Query 14124 CGATGACAACGATGCCCGTCTCGTTATCAAAGCCATCCATCTCAGTCAAGAGTTGATTGA 14183 | | ||| | | | | | | | |||||||||||||| ||| ||| | |||||| | Sbjct 30342 CCACGACGATCACACTGGCGTTGGTTTCAAAGCCATCCATTTCAACCAACATTTGATTCA 30401 Query 14184 TGGTTTGTTCGCGTTCATCATTCGCAGGCATACCA--CCCGCACTGCGTTGCTTACCGAC 14241 |||||||||||| |||||||| || | ||| || || | ||| || ||| || Sbjct 30402 GGGTTTGTTCGCGCTCATCATTACCA--CCGCCCAGGCCGGCTCCGCGCTGGCGACCCAC 30459 Query 14242 GGCGTCAATTTCATCGATGAAAACGATACATGGTTGATTTTCACGGGCAACTTCAAAGAT 14301 |||||||||||||| ||||||| || || ||| ||| | ||| ||||| || Sbjct 30460 CGCGTCAATTTCATCAATGAAAATAATGCAAGGTGCATTCTTTTTGGCGTTATCAAACAT 30519 Query 14302 ATCTCGCACTCTCTTGGCACCGACACCCACAAACATCTCCACAAAAT 14348 ||| ||||| | || || |||||||| ||||| || || |||| Sbjct 30520 ATCACGCACCCGAGACGCGCCTACACCCACGAACATTTCAACGAAAT 30566 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 618336389515920