Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Schmidtea_20mediterranea_20[genbank_20GCA_5F000691995.1_202014-05- 30] 12,782 sequences; 700,725,851 total letters Query= NC_028093.1 Length=182309 Score E Sequences producing significant alignments: (Bits) Value seq4842 98.7 1e-15 >seq4842 Length=204163 Score = 98.7 bits (108), Expect = 1e-15 Identities = 278/425 (65%), Gaps = 4/425 (1%) Strand=Plus/Plus Query 9466 GTGAACACCCAAGATCTTCTCGCGTCCCCGAACACTTGGGAGAGCTACTTGGATCTTACG 9525 ||||||| ||| || | |||||||| |||| | || || | || | | | || Sbjct 30223 GTGAACATTCAAAATTTGTTCGCGTCCACGAATATCAGGTAGGGTGACGTAAACTTGCCG 30282 Query 9526 ATCAAAGCGACCTGGACGAAGGAGCGCGTCATCAAGGATATCAACGCGATTCGTCGCGGC 9585 ||||| || || |||||||| | ||| | || | |||||| |||||| || ||||| Sbjct 30283 GTCAAAACGCCCCGGACGAAGCAACGCTTGGTCCAAAATATCAGGGCGATTGGTTGCGGC 30342 Query 9586 GATGACAACAATACCTGTTTCATTATCAAAACCATCCATCTCTGTCAAAAGTTGGTTAAT 9645 | ||| | | || | | | ||||| |||||||| || ||| | ||| || | Sbjct 30343 CACGACGATCACACTGGCGTTGGTTTCAAAGCCATCCATTTCAACCAACATTTGATTCAG 30402 Query 9646 AGTTTGTTCCCGTTCATCATTCGCTGGCATACCA--CCAGCACTGCGTTGCTTTCCCACG 9703 |||||||| || |||||||| | | ||| || || | ||| || ||||| Sbjct 30403 GGTTTGTTCGCGCTCATCATTACCA--CCGCCCAGGCCGGCTCCGCGCTGGCGACCCACC 30460 Query 9704 GCATCAATCTCATCAATGAAGACGATGCATGGTTGATTTTCGCGAGCGACTTCAAAGAGA 9763 || ||||| ||||||||||| | ||||| ||| ||| | ||| ||||| | | Sbjct 30461 GCGTCAATTTCATCAATGAAAATAATGCAAGGTGCATTCTTTTTGGCGTTATCAAACATA 30520 Query 9764 TCCCGTACACGCTTGGCGCCCACACCAACAAACATCTCCACAAAGTTTGCGGCGGAACAT 9823 || || || || ||||| ||||| || ||||| || || || | | | ||| Sbjct 30521 TCACGCACCCGAGACGCGCCTACACCCACGAACATTTCAACGAAATCAGAACCAGAAATG 30580 Query 9824 TGGATGAAGGGGACATTAGATTCACCCGCAATGGCTCGGGCGAGAAGAGTCTTACCCGTA 9883 || || || || || | ||| |||||||| | | || || || || |||||||| Sbjct 30581 CTGAAAAAAGGAACCTTGGCTTCGCCCGCAATCGATTTAGCAAGCAGTGTTTTACCCGTT 30640 Query 9884 CCTGG 9888 || || Sbjct 30641 CCAGG 30645 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 583167609505680