Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Schmidtea_20mediterranea_20[genbank_20GCA_5F000691995.1_202014-05- 30] 12,782 sequences; 700,725,851 total letters Query= NC_028104.1 Length=73689 Score E Sequences producing significant alignments: (Bits) Value seq3755 105 3e-18 >seq3755 Length=28474 Score = 105 bits (116), Expect = 3e-18 Identities = 304/462 (66%), Gaps = 7/462 (2%) Strand=Plus/Minus Query 64876 AATGTCAGTACTAAATCCTGTGCCAATACCCTTTGAGCCATTTATTAAAATCATCGGAAT 64935 ||| | | |||| | || || || ||||| | | || || ||||| | ||||||||| Sbjct 11539 AATTTTACTACTCCACCCAGTTCCGATACCGTCACACCCGTTAATTAATACCATCGGAAT 11480 Query 64936 AATTGGTGCATAAAAGATAGGCTCAACAATGAGACCATCATCATCCAAATACTTCAAAAT 64995 |||||||||||| | || || | | || ||||| ||||| ||||| | Sbjct 11479 AATTGGTGCATACCATTCTGGTTCGATAGATTGATTGTCATCCAGCAAATTTTTCAATAC 11420 Query 64996 GGCATCATCCTCTTT-TGGAAATATAGAACGAGTTATTTTATTCAATTGAGTATAAATAT 65054 || || || || | |||||| || | || | |||| ||||||||||| | || | Sbjct 11419 CGCCTCGTCGTCGTGGTGGAAA-ATCAATTTCGTCAATTTACTCAATTGAGTACATATGT 11361 Query 65055 ATCTTTCGGATGCGTGGTCTTGTCC---AGTTCGTCGTGTTCCAAACTGACCATTTGGCA 65111 | | || ||| |||| || || | | || || || || || || ||||||| Sbjct 11360 AACGAGGTGAAGCGCTATCTTTGCCCCCAGCTAGCCGAGTACCGAATTGGCCGTTTGGCA 11301 Query 65112 TTAATAAATTAATATTGTTTGAACCAATAAAATTCTGAGCCATTCCGATAATTGCTGCAT 65171 | |||| ||| || || || || | |||| |||||||| || || | || Sbjct 11300 TCAATAGATTGATGTTATTGCTGCCGACGAAATCCTGAGCCAAATTAATGATAGTTGACA 11241 Query 65172 TTAAACTCGCTTCACCGTGATGATATCCTGAATGTTCAGAGACATATCCACTAAATTGAG 65231 | || ||||||||||| |||||| | || |||||| || ||||| ||||| | Sbjct 11240 TCAAGGATGCTTCACCGTGGTGATATGCGGATAGTTCAGCCACGGATCCAGCTAATTGTG 11181 Query 65232 CAACTTTTATTTCCGTTGTTAAATTCTTTTTAAATGCA-GAATACAATATTTTCCGTAAA 65290 ||||||||| ||| | ||||||| |||| || ||| | | | || | ||| | | | Sbjct 11180 CAACTTTTAATTCTTTCACTAAATTCCTTTTCAA-GCAGGCAAATAACACTTTTCTTTGA 11122 Query 65291 CTAATTTTCAATCCATCCATTAAATTAGGAATGCTTCTGTCA 65332 | || || || ||||||||| ||||||||||| ||| Sbjct 11121 CCTGGCTTGAACCCGTCCATTAAACATGGAATGCTTCTCTCA 11080 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 235643285622300