Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Schmidtea_20mediterranea_20[genbank_20GCA_5F000691995.1_202014-05- 30] 12,782 sequences; 700,725,851 total letters Query= NC_031038.1 Length=222832 Score E Sequences producing significant alignments: (Bits) Value seq2828 271 1e-67 seq4321 174 2e-38 seq2867 114 2e-20 seq388 84.2 3e-11 >seq2828 Length=37213 Score = 271 bits (300), Expect = 1e-67 Identities = 441/633 (70%), Gaps = 54/633 (9%) Strand=Plus/Plus Query 46612 AAATGTTTAAACATTAAACATGCAAAATCACAATGAAGGCCTTCATCTCTACTAATTAAT 46671 |||| ||||||||| ||||| |||||||| |||||||| |||||||||| ||||||||| Sbjct 28693 AAATATTTAAACATCAAACAAGCAAAATCGCAATGAAGTCCTTCATCTCGGCTAATTAAT 28752 Query 46672 TCGTTA--GAAA-ATGTGAGCCCAGGCATTAGTCCACGCTTTTTGAGCCAAAATATAGCC 46728 ||||| |||| || | || ||||||| |||||||||||| ||||||||||| | Sbjct 28753 TCGTTGCTGAAACAT---AATCCGGGCATTAATCCACGCTTTTTAAGCCAAAATATCGAT 28809 Query 46729 GCGAAAGATCCAGAAAAGAATATGCCTTCTACAGCCGCGAATGCGACAAGTCTCTCTCCG 46788 || ||| ||| || ||||| || || ||||| || ||||| |||| ||| ||| Sbjct 28810 GCAAAACTACCACTGAAAAATATTCCCTCGACAGCAGCAAATGCAACAACTCTAGTTCCA 28869 Query 46789 TAACTGGCATCATTATG---AATCCACCTTTGAGCCCAATCAGCCTTTTTCTTTACACAA 46845 || ||| | |||| |||||| | ||||| | ||| ||||||| || || Sbjct 28870 AAAGTGGATTTTTTATCGCTAATCCAACGCAATGCCCATTGAGCTTTTTTCTGAACGCAT 28929 Query 46846 GGCATTGTTTCTATAGCATTAAA------------------GAGAAAGtttttttCATCA 46887 ||||| ||||| || |||||||| |||| | |||||| || Sbjct 28930 GGCATAGTTTCGATGGCATTAAATAATTTATTCCTTTTTTCGAGATAATTTTTTATGACA 28989 Query 46888 -------CTAT--CTTT--------------AACATATGTATCTATTAAAAGACTATACA 46924 |||| |||| |||||| | ||| ||||| ||| ||||| Sbjct 28990 AAGAAAACTATTACTTTGTTTCTGTATCAGTAACATAAGAATCGATTAATAGAGAATACA 29049 Query 46925 TTTCTGAATGAATGTTTTCAATAGCCATCTGAAATCCGTAAAAA-CATCTTGCTTCAGTA 46983 |||||||||||||||||||||| || || ||||| | |||||| | || ||||| | | Sbjct 29050 TTTCTGAATGAATGTTTTCAATTGCAATTTGAAAACTGTAAAATGCCTCA-GCTTCGGGA 29108 Query 46984 ATCTGTACCTCTGTACAAAATCGTTCAGACAA-ATTCTCATTCACTATTCCATCACTAGC 47042 || | || ||| | |||| ||| ||| | ||| ||||| || ||||||||||| || Sbjct 29109 ATTTTCACTTCTTGAATGAATCTTTC-GACGAGATTTTCATTGACAATTCCATCACTGGC 29167 Query 47043 AGCAAAAAATGCCAATACATGTTTAATAAAATATTTTTCATCGGTAGTCAGTTTATTCCA 47102 |||||||||||| | || || |||| ||||| ||||||| | ||| ||| ||||| Sbjct 29168 AGCAAAAAATGCAAGAACGTGAGTAATGAAATACCGTTCATCGTCATTCATTTTTTTCCA 29227 Query 47103 GTCATTGATATCTTTTGATATATCTACTTCTTCAGCTGTCCAGAATGACGCCTCTGCTTT 47162 || | | ||||||||||| || ||||| | | ||||| ||||| | ||||| Sbjct 29228 GTGAGCAAAATCTTTTGATAAATTAACTTCATTTACAGTCCAAAATGAAGATCGAGCTTT 29287 Query 47163 TTTATACATATTCCATATATCACGATATTGGAT 47195 ||| |||| | ||||||||| |||||| || Sbjct 29288 ATTAAACATTTCCCATATATCTTCATATTGTAT 29320 Score = 183 bits (202), Expect = 4e-41 Identities = 229/309 (74%), Gaps = 4/309 (1%) Strand=Plus/Plus Query 46889 TATCTTTAACATATGTATCTATTAAAAGACTATACATTTCTGAATGAATGTTTTCAATAG 46948 |||| ||||||| | ||| ||||| ||| ||||||||||||||||||||||||||| | Sbjct 31094 TATCAGTAACATAAGAATCGATTAATAGAGAATACATTTCTGAATGAATGTTTTCAATTG 31153 Query 46949 CCATCTGAAATCCGTAAAAA-CATCTTGCTTCAGTAATCTGTACCTCTGTACAAAATCGT 47007 | || ||||| | |||||| | || ||||| | ||| | || ||| | |||| | Sbjct 31154 CAATTTGAAAACTGTAAAATGCCTCA-GCTTCGGGAATTTTCACTTCTTGAATGAATCTT 31212 Query 47008 TCAGACAA-ATTCTCATTCACTATTCCATCACTAGCAGCAAAAAATGCCAATACATGTTT 47066 || ||| | ||| ||||| || ||||||||||| |||||||||||||| | || || | Sbjct 31213 TC-GACGAGATTTTCATTGACAATTCCATCACTGGCAGCAAAAAATGCAAGAACGTGAGT 31271 Query 47067 AATAAAATATTTTTCATCGGTAGTCAGTTTATTCCAGTCATTGATATCTTTTGATATATC 47126 ||| ||||| ||||||| | ||| ||| ||||||| | | ||||||||||| || Sbjct 31272 AATGAAATACCGTTCATCGTCATTCATTTTTTTCCAGTGAGCAAAATCTTTTGATAAATT 31331 Query 47127 TACTTCTTCAGCTGTCCAGAATGACGCCTCTGCTTTTTTATACATATTCCATATATCACG 47186 ||||| | | ||||| ||||| | ||||| ||| |||| | ||||||||| Sbjct 31332 AACTTCATTTACAGTCCAAAATGAAGATCGAGCTTTATTAAACATTTCCCATATATCTTC 31391 Query 47187 ATATTGGAT 47195 |||||| || Sbjct 31392 ATATTGTAT 31400 >seq4321 Length=90450 Score = 174 bits (192), Expect = 2e-38 Identities = 524/800 (66%), Gaps = 22/800 (3%) Strand=Plus/Plus Query 76270 AAGAGCTATAGATGCTAGATTACAAACGGCTACCTCATTAGCATTGGCATATTGTATTAT 76329 ||||| || || || | ||| ||||| |||| |||| || | ||||| || || Sbjct 81350 AAGAGAGATCGAAGCCAAATTGCAAACAGCTATTTCATCAGGAGAACTATATTCTACAAT 81409 Query 76330 CTCCGTGCATAGATTACTACACTTGATAGTTCCAAGATTTTGTTGGTTGCTCTTTTTGTT 76389 || ||||| | ||| || || ||||| ||||| | || || || || ||| || Sbjct 81410 TTCTGTGCACAAATTGCTGCATTTGATCGTTCCTAAATGCTGATGATTTGACTTGGCATT 81469 Query 76390 ACATGAGTCCTTATAAAGAACAAACGGAGTTCCAGTTTCAATCTGTGATTCGATAATAGA 76449 || | |||||| || || | | | |||||||| ||||| || ||||| |||| || Sbjct 81470 GCAGGCGTCCTTGTATAGCATATAAGGAGTTCCGGTTTCGATTTGTGAATCGAGGATTTC 81529 Query 76450 TTTCCAGACGACTCTAGCTTTTATTATAGATTTGTATCGCTTCTCTCTTTC---ATATTG 76506 |||||| | | ||||||||| || | ||| | || | || | |||| |||| Sbjct 81530 TTTCCACAAAATTCTAGCTTTAATCGT---TTTATTTCCCATCCCCTTTTCTTCATATAA 81586 Query 76507 TGTATATAACCGTTCAAATTCATCTCCCCAAACATCATCCAAACCAGGACATTCATTCGG 76566 | ||| | ||||| | |||||||| |||| | |||| ||||| || || Sbjct 81587 TTCATAGAGTTTGTCAAACTTTTCTCCCCAGCATTCATGAAGTCCAGCACATTTATGAGG 81646 Query 76567 ACACATCAATGACCACTCACCATCTTCCTTAACCCGTTTCATAAAGAGATCAGGTATCCA 76626 |||||||| ||| | ||||| | ||| |||||||| || | ||| || ||||| Sbjct 81647 GTCCATCAATGTCCAATTCCCATCACTTTGAACTCGTTTCATGAATAAATCTGGAATCCA 81706 Query 76627 TAGAGCAATAAATAGATCTCGGGTTCTACGTTC--TTCATTTCCTGTATTCTTTTTAAGA 76684 | ||| ||||| ||||| | | | ||| ||||| ||| | |||||| | Sbjct 81707 CAAAGCGCAAAATAAATCTCTAGCTTTT--TTCGATTCATCTCCG---TGGTTTTTACGC 81761 Query 76685 ---TCTAGGAACTCCATAATATCAGAATGCCATGGTTCTAGATATATCGCCATAACACCC 76741 || | || |||| || |||||||||||||| || | ||| || || | |||| Sbjct 81762 AATTCCAAAAATTCCAATATGTCAGAATGCCATGGCTCAATATAAATGGCGAATGCACCG 81821 Query 76742 GGTCGTTTATTACCTCCCTGATCTATATATCTGGCAGTGTTATTATAAACTCTCAACATT 76801 ||||| ||||| || || || || | || | || | | |||| | || | |||| Sbjct 81822 GGTCGCTTATTTCCACCTTGGTCGACGTAACGAGCTGCATAATTAAATACCTGGAGCATT 81881 Query 76802 GGAATAATGCCGTTAGATGTACCATTTGTTCCAGAAATATAACTTCCACATGCACGAATA 76861 ||| | | || || ||| ||||||||||||| || |||| || | |||| Sbjct 81882 GGAGTTAATCCATTCGATACACCATTTGTTCCATTGATTGGTGATCCAGTCGCTCTAATA 81941 Query 76862 TTACTAATAGATAGGCCTATTCCTCCTGCCATTTTAGAGATTAGAGCACAGCGTTTCAAT 76921 | || | || || || || || || |||||| || |||||||| ||| | Sbjct 81942 CAATGAACATTTAAACCGATACCACCAGCATATTTAGAAATAAGAGCACATTCTTTAAGA 82001 Query 76922 GTGTCATAGATGCCCTCTATACTATCATCCATCA-TGTTAAGAAGAAAACAGCTAGACAT 76980 || | | || || || ||||| ||||| ||| |||||| || ||||| ||||| | Sbjct 82002 GTACTAAATATTCCATCAATACTGTCATCTTTCATTGTTAA-TAGGAAACAACTAGAGAG 82060 Query 76981 TTGATGATGAACAGT--TCCTGCATTAAACAATGTAGGAGATGCATGAGTGAACCATTTT 77038 |||| || || | || |||||||| ||||| ||||| || || | |||||||| Sbjct 82061 TTGACCAT--ACTTTAACCCAGCATTAAATAATGTTGGAGAAGCGTGTATAAACCATTTC 82118 Query 77039 TCAGAAAGTAGATTGTATGT 77058 || || | || ||| || || Sbjct 82119 TCTGACATTAAATTATAAGT 82138 Score = 120 bits (132), Expect = 4e-22 Identities = 207/297 (70%), Gaps = 8/297 (3%) Strand=Plus/Plus Query 75908 ACATCCCAGAGATCGTATTGTAGAATTCCGTTGCTAGCATATGATCCATTATATGTTTCG 75967 |||| ||| | ||| || |||| ||| || ||| | || || ||||||||||| Sbjct 79815 ACATTCCACATATCAGGCTGGAGAACTCCTTTACTAACCGGAGAGCCTTTATATGTTTCA 79874 Query 75968 TAAGTCCCGTCCTTTTCAGCTAGTTCGCAACTCGCCTCT---AACGCACCGTAATAAATT 76024 ||||| || ||||| |||| ||| || || || | | ||||| ||||||| Sbjct 79875 TAAGTTCCAAACTTTTTCGCTAATTCACA---CGACTTTTTAAGAGCACCAAAATAAATA 79931 Query 76025 GTTTCGAAAATCTTCTTATTAAGATCTTGC-GCTTCAAGACTATCAAAAGGATAATGTAA 76083 || || ||||| |||||| | || |||| || ||| ||| ||||| ||||| | || Sbjct 79932 GTCTCAAAAATTCGCTTATTCA-ATTTTGCAGCCTCATCACTTTCAAATGGATAGCGCAA 79990 Query 76084 AAGAATAAATGCATCTGCTAGTCCCTGAACTCCAATACCAATAGGTCTATGTCTCTTATT 76143 | ||| |||| || || || ||||||||||| ||||| || || ||||| ||| Sbjct 79991 CAATGCAAAAACATCGGCCAGACCTTGAACTCCAATCCCAATTGGCCTGTGTCTTAAATT 80050 Query 76144 GGAAATTTCAGCTTCTGGAATAGGGTAATAATTAATATCTATAATTTTATTGAGATT 76200 ||| || |||||| || | || |||| ||| ||||| ||||| || || ||||| Sbjct 80051 GGATGTTCTAGCTTCCGGTAATGGATAATGATTTATATCAATAATCTTGTTAAGATT 80107 Score = 109 bits (120), Expect = 8e-19 Identities = 247/369 (67%), Gaps = 3/369 (1%) Strand=Plus/Plus Query 75478 ATAACTCGGATCGGCTATATGAATATTCATCGACTGACTTTGATCGATGAAAGCTCCTCT 75537 |||| ||| | || | ||| | |||||| ||||||||||| || || | |||| Sbjct 79329 ATAATCCGGTGCAGCAACATGGAAATTCATACTTTGACTTTGATCAATAAACGGAGCTCT 79388 Query 75538 ATCAGCCGCCATTTTTATAATGGTCTTTTGAGGAATTTCCCAAATAGTTTTGAAAACTTG 75597 || || |||| |||||| || | |||| |||||||||||| |||||| || | | Sbjct 79389 GTCGGCAGCCAATTTTATGATAACCGATTGATGAATTTCCCAAACAGTTTTAAATAACTC 79448 Query 75598 TTTGATATCATCTGGAAGA-TTTG--TATTTTGAATGGATCCGCCATCAGATATAATTGT 75654 ||| || ||||| |||||| ||| ||||||| ||||| || | || | ||||| | Sbjct 79449 TTTCATTTCATCGGGAAGACCTTGGATATTTTGTATGGAACCACGATTGGCAATAATGGC 79508 Query 75655 ATTCTTGATCTCATCATTCCACAATTTTCTCTCGGTTAAAACTCTAAGGAGATGAGGATT 75714 |||||| || ||||| ||||| || | | | | || || | || ||| Sbjct 79509 ATTCTTCATATCATCTGACCACAGATTCAACCGAATCAGATCTTCAATTAAATATCTATT 79568 Query 75715 AACAATTTGAAATTCTCCAGACAATACTCTTCGAGTGTAAATATTACTGGTATATGGTTC 75774 |||| |||||| || || |||| || || ||||| || | | | || Sbjct 79569 TACAACAACAAATTCCCCGCTTAAAACTCGTCTTAAATAGATATTGCTTGAGAACGCCTC 79628 Query 75775 CACAGATTCATTGTTTCCCAAAATTTGAGCAGTTGAAGCAGTCGGCATAGGTGCCACCAA 75834 | | ||||||||||||| | ||| |||| ||| || || |||||||| || || || Sbjct 79629 AAAACATTCATTGTTTCCGAGAATCTGAGAAGTACTCGCTGTTGGCATAGGAGCAACTAA 79688 Query 75835 TAAACTATT 75843 ||| ||||| Sbjct 79689 TAAGCTATT 79697 >seq2867 Length=150518 Score = 114 bits (126), Expect = 2e-20 Identities = 188/266 (71%), Gaps = 4/266 (2%) Strand=Plus/Plus Query 46820 CCCAATCAGCCTTTTTCTTTACACAAGGCATTGTTTCTATAGCATTAAAGAGAAAGtttt 46879 |||| | |||||||||| || | ||||| ||||| || |||||||| | | | Sbjct 86868 CCCATTGTGCCTTTTTCTGAACTCGTGGCATAGTTTCGATGGCATTAAATAATTTACTCT 86927 Query 46880 tttCATCACTATCTTTAACATATGTATCTATTAAAAGACTATACATTTCTGAATGAATGT 46939 || || |||| ||||||| | ||| ||||| || || |||||||||||||||| Sbjct 86928 TTGTTTCTGTATCAATAACATAAGAATCGATTAATAGCGAATGCATTTCTGAATGAATGC 86987 Query 46940 TTTCAATAGCCATCTGAAATCCGTAAAA-ACATCTTGCTTCAGTAATCTGTACCTCTGTA 46998 ||||||| | || ||||| | |||||| | || ||||||| ||| | || ||| | Sbjct 86988 TTTCAATGGTAATTTGAAAACTGTAAAATGCCTC-AGCTTCAGGAATTTTGACTTCTTGA 87046 Query 46999 CAAAATCGTTCAGACAA-ATTCTCATTCACTATTCCATCACTAGCAGCAAAAAATGCCAA 47057 | |||| || ||||| ||| ||||| | || |||||||| ||||| |||| | | Sbjct 87047 AAGAATCTCTC-GACAAGATTTTCATTGTCAATCCCATCACTGGCAGCGAAAAGGGTAAG 87105 Query 47058 TACATGTTTAATAAAATATTTTTCAT 47083 || || |||| |||||| ||||| Sbjct 87106 GACGTGAGTAATGAAATATCATTCAT 87131 >seq388 Length=20733 Score = 84.2 bits (92), Expect = 3e-11 Identities = 149/214 (70%), Gaps = 5/214 (2%) Strand=Plus/Plus Query 44504 ATTGATCAAAATTACTCCAATGTTCCCCCTATAATCTTCATCTATTACTCCACCTCCCAC 44563 ||| | ||| | |||||||| ||||| | |||||||| ||| || |||||| | || || Sbjct 1837 ATTAAACAATAATACTCCAACATTCCCACGATAATCTTGATCAATAACTCCAGCCCCAAC 1896 Query 44564 ATCAATACCTTTTAGAGAA---AGACCCGATCTAGGCGCTATTCTTCCATAACAGAATTT 44620 ||| ||| ||| || ||||| |||||| || |||||||||||||| || Sbjct 1897 ATCGATAAAATTTTTCCAAGCTAGACCACTTCTAGGTGCAATTCTTCCATAACAACCTTC 1956 Query 44621 TGGCATAGACATACGAATATCTGTTTTAATCAACCGTCTTT-CTCCAGGAGGGATAGTAT 44679 ||| | | || ||||||| ||||| | ||| |||| || | || ||| || Sbjct 1957 TGGTAATGCAATTTGAATATCAGTTTTCA-CAATTTCCTTTCCTTTTGCTGGAATAATAC 2015 Query 44680 AATCGTAAGCACTGTATAAATCATATCCTGCCGC 44713 |||| |||||| |||| |||||||| || || Sbjct 2016 AATCTATAGCACTACATAAGTCATATCCAGCTGC 2049 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 712820490906240