Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Schmidtea_20mediterranea_20[genbank_20GCA_5F000691995.1_202014-05- 30] 12,782 sequences; 700,725,851 total letters Query= NC_031465.1 Length=360610 Score E Sequences producing significant alignments: (Bits) Value seq9680 150 4e-31 seq62 111 4e-19 seq10343 96.9 8e-15 >seq9680 Length=90248 Score = 150 bits (166), Expect = 4e-31 Identities = 169/226 (75%), Gaps = 0/226 (0%) Strand=Plus/Plus Query 151884 CTGAGTCTGAGGACAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTT 151943 || ||||| || || | ||| |||||| ||||||||||||||||| || | || ||| Sbjct 41723 CTAAGTCTAAGTACCAAATGGAGAGTACTTTCTTTTTGGATGTTGTAGTCAGACAATGTT 41782 Query 151944 CTCCCATCTTCTAGGCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCT 152003 | |||||||||| ||| || |||||||| || ||||| || || | | || ||| Sbjct 41783 CGACCATCTTCTAATTGTTTTCCAGCGAAGATTAGTCTCTGTTGATCTGGTGGAATGCCT 41842 Query 152004 TCCTTTTCTTGAATTTTTTGTTTGACAGTCTCTACGCTGTCTGAACTCTCTACTTCAAGA 152063 ||||| ||||||||||| ||| ||| | || | | | |||||| ||| |||||||| Sbjct 41843 TCCTTGTCTTGAATTTTGGCTTTAACATTTTCAATGGTATCTGAAGACTCAACTTCAAGT 41902 Query 152064 GTAATAGTTTTGCCCGTGAGAGTCTTCACGAAGACCTGCATTTTAC 152109 ||||| ||||| ||||| || || || || || | ||||||| ||| Sbjct 41903 GTAATTGTTTTACCCGTTAGGGTTTTAACAAAAATCTGCATTCTAC 41948 >seq62 Length=83120 Score = 111 bits (122), Expect = 4e-19 Identities = 157/221 (71%), Gaps = 0/221 (0%) Strand=Plus/Minus Query 151887 AGTCTGAGGACAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCTC 151946 |||| || || ||||| | || || ||||| || || |||||||| | |||||||| Sbjct 2390 AGTCGAAGTACTAGATGTAATGTGGATTCTTTCTGAATATTGTAATCAGATAAAGTTCGT 2331 Query 151947 CCATCTTCTAGGCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTCC 152006 || ||||||| ||| ||||| || || | | ||||| || | | || ||||| Sbjct 2330 CCGTCTTCTAATTGTTTTCCGGCAAAAATCAATCGTTGCTGATCAGGAGGAATGCCTTCT 2271 Query 152007 TTTTCTTGAATTTTTTGTTTGACAGTCTCTACGCTGTCTGAACTCTCTACTTCAAGAGTA 152066 || ||||||||||| ||| ||| | || | | || ||| || |||||||| || Sbjct 2270 TTGTCTTGAATTTTGGCTTTTACATTTTCAATTGTATCGGAAGATTCAACTTCAAGGGTT 2211 Query 152067 ATAGTTTTGCCCGTGAGAGTCTTCACGAAGACCTGCATTTT 152107 || ||||| ||||| ||||||||||| || | ||||| || Sbjct 2210 ATTGTTTTACCCGTAAGAGTCTTCACAAAAATTTGCATGTT 2170 >seq10343 Length=31290 Score = 96.9 bits (106), Expect = 8e-15 Identities = 142/201 (71%), Gaps = 0/201 (0%) Strand=Plus/Minus Query 151908 GTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCTCCCATCTTCTAGGCTTTTCCCG 151967 || ||||||||||| || || ||||| | |||||| | |||||||| | || || Sbjct 25756 GTTGACTCTTTTTGAATATTATAATCTGATAAAGTACGACCATCTTCCAATTGCTTGCCA 25697 Query 151968 GCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTCCTTTTCTTGAATTTTTTGTTTG 152027 || || || | | ||| ||||| | | |||||||| || |||||||| ||| ||| Sbjct 25696 GCAAAAATCAAACGCTGTTGGTCTGGTGGAATTCCTTCTTTATCTTGAATCTTTGATTTA 25637 Query 152028 ACAGTCTCTACGCTGTCTGAACTCTCTACTTCAAGAGTAATAGTTTTGCCCGTGAGAGTC 152087 ||| | || | || || ||| |||||||| || |||||||| || || | || Sbjct 25636 ACATTTTCAATAGAATCAGATGACTCAACTTCAAGTGTTATAGTTTTCCCTGTTAATGTT 25577 Query 152088 TTCACGAAGACCTGCATTTTA 152108 || || |||| |||||||||| Sbjct 25576 TTAACAAAGATCTGCATTTTA 25556 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1153631839488722