Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Schmidtea_20mediterranea_20[genbank_20GCA_5F000691995.1_202014-05- 30] 12,782 sequences; 700,725,851 total letters Query= NC_033423.1 Length=208501 Score E Sequences producing significant alignments: (Bits) Value seq2440 96.9 5e-15 >seq2440 Length=340305 Score = 96.9 bits (106), Expect = 5e-15 Identities = 115/156 (74%), Gaps = 0/156 (0%) Strand=Plus/Minus Query 63742 AAAATACCAGAAATAGGTGATAAATTTGCTTCTTTTACAGCTCAAAAAGGTACGTGTGGT 63801 ||||| || |||| || ||||| ||||| || | | ||||| || || |||||| Sbjct 262928 AAAATTCCGCAAATCGGCGATAAGTTTGCGTCCCGTCACGGACAAAAGGGAACCTGTGGT 262869 Query 63802 ATGATTTATCGACAAGAAGATATGCCTTTTACCAAAGACGGTATCGTACCCGATCTCGTC 63861 || | || ||||| ||||||||||| || |||| || || ||| || ||| || || Sbjct 262868 ATTAGATACCGACAGGAAGATATGCCGTTCACCAGTGAAGGAATCACTCCTGATATCATC 262809 Query 63862 ATCAATCCACACGCTTTTCCCAGTCGTATGACCGTT 63897 || ||||||||||| ||||||| || ||||| ||| Sbjct 262808 ATTAATCCACACGCAATTCCCAGCCGGATGACGGTT 262773 Score = 96.9 bits (106), Expect = 5e-15 Identities = 115/156 (74%), Gaps = 0/156 (0%) Strand=Plus/Minus Query 63742 AAAATACCAGAAATAGGTGATAAATTTGCTTCTTTTACAGCTCAAAAAGGTACGTGTGGT 63801 ||||| || |||| || ||||| ||||| || | | ||||| || || |||||| Sbjct 265821 AAAATTCCGCAAATCGGCGATAAGTTTGCGTCCCGTCACGGACAAAAGGGAACCTGTGGT 265762 Query 63802 ATGATTTATCGACAAGAAGATATGCCTTTTACCAAAGACGGTATCGTACCCGATCTCGTC 63861 || | || ||||| ||||||||||| || |||| || || ||| || ||| || || Sbjct 265761 ATTAGATACCGACAGGAAGATATGCCGTTCACCAGTGAAGGAATCACTCCTGATATCATC 265702 Query 63862 ATCAATCCACACGCTTTTCCCAGTCGTATGACCGTT 63897 || ||||||||||| ||||||| || ||||| ||| Sbjct 265701 ATTAATCCACACGCAATTCCCAGCCGGATGACGGTT 265666 Score = 96.9 bits (106), Expect = 5e-15 Identities = 115/156 (74%), Gaps = 0/156 (0%) Strand=Plus/Minus Query 63742 AAAATACCAGAAATAGGTGATAAATTTGCTTCTTTTACAGCTCAAAAAGGTACGTGTGGT 63801 ||||| || |||| || ||||| ||||| || | | ||||| || || |||||| Sbjct 266695 AAAATTCCGCAAATCGGCGATAAGTTTGCGTCCCGTCACGGACAAAAGGGAACCTGTGGT 266636 Query 63802 ATGATTTATCGACAAGAAGATATGCCTTTTACCAAAGACGGTATCGTACCCGATCTCGTC 63861 || | || ||||| ||||||||||| || |||| || || ||| || ||| || || Sbjct 266635 ATTAGATACCGACAGGAAGATATGCCGTTCACCAGTGAAGGAATCACTCCTGATATCATC 266576 Query 63862 ATCAATCCACACGCTTTTCCCAGTCGTATGACCGTT 63897 || ||||||||||| ||||||| || ||||| ||| Sbjct 266575 ATTAATCCACACGCAATTCCCAGCCGGATGACGGTT 266540 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 666968618059920