Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Spirometra_20erinaceieuropaei_20[genbank_20GCA_5F000951995.1_202014- 09-26] 482,396 sequences; 1,258,717,181 total letters Query= NC_000852.5 Length=330611 Score E Sequences producing significant alignments: (Bits) Value seq5131 104 5e-17 seq381426 102 2e-16 seq327860 98.7 2e-15 seq157919 98.7 2e-15 seq48536 98.7 2e-15 seq15675 98.7 2e-15 seq10778 98.7 2e-15 seq267693 95.1 3e-14 seq117302 95.1 3e-14 seq19399 95.1 3e-14 seq15476 95.1 3e-14 seq447532 93.3 9e-14 seq416376 93.3 9e-14 seq296937 93.3 9e-14 seq313629 91.5 3e-13 seq34060 91.5 3e-13 seq150905 89.7 1e-12 seq54355 89.7 1e-12 seq17338 89.7 1e-12 seq188816 87.8 4e-12 seq36239 87.8 4e-12 seq27187 87.8 4e-12 seq224796 86.0 1e-11 seq1017 84.2 5e-11 >seq5131 Length=15476 Score = 104 bits (114), Expect = 5e-17 Identities = 66/72 (92%), Gaps = 0/72 (0%) Strand=Plus/Minus Query 165710 GCCCGTCTAGCTCAGTCGGTAGAGCGCCAGACTTTTAATCTGGTGGTCGTGGGTTCGAGC 165769 ||||| ||||||||||||||||||| | ||||||||||||| | |||||||||||||||| Sbjct 6148 GCCCGGCTAGCTCAGTCGGTAGAGCACGAGACTTTTAATCTCGGGGTCGTGGGTTCGAGC 6089 Query 165770 CCCACGATGGGC 165781 |||||| ||||| Sbjct 6088 CCCACGTTGGGC 6077 Score = 95.1 bits (104), Expect = 3e-14 Identities = 64/72 (89%), Gaps = 0/72 (0%) Strand=Plus/Plus Query 165710 GCCCGTCTAGCTCAGTCGGTAGAGCGCCAGACTTTTAATCTGGTGGTCGTGGGTTCGAGC 165769 ||||| ||||||||||||||||||| | ||||| ||||||| | |||||||| ||||||| Sbjct 3472 GCCCGGCTAGCTCAGTCGGTAGAGCACGAGACTCTTAATCTCGGGGTCGTGGATTCGAGC 3531 Query 165770 CCCACGATGGGC 165781 |||||| ||||| Sbjct 3532 CCCACGTTGGGC 3543 >seq381426 Length=715 Score = 102 bits (112), Expect = 2e-16 Identities = 67/74 (91%), Gaps = 0/74 (0%) Strand=Plus/Minus Query 165710 GCCCGTCTAGCTCAGTCGGTAGAGCGCCAGACTTTTAATCTGGTGGTCGTGGGTTCGAGC 165769 ||||| ||||||||||||||||||| | ||||| ||||||| | |||||||||||||||| Sbjct 215 GCCCGGCTAGCTCAGTCGGTAGAGCACGAGACTCTTAATCTCGGGGTCGTGGGTTCGAGC 156 Query 165770 CCCACGATGGGCAT 165783 |||||| ||||||| Sbjct 155 CCCACGTTGGGCAT 142 >seq327860 Length=890 Score = 98.7 bits (108), Expect = 2e-15 Identities = 65/72 (90%), Gaps = 0/72 (0%) Strand=Plus/Plus Query 165710 GCCCGTCTAGCTCAGTCGGTAGAGCGCCAGACTTTTAATCTGGTGGTCGTGGGTTCGAGC 165769 ||||| ||||||||||||||||||| | ||||| ||||||| | |||||||||||||||| Sbjct 2 GCCCGGCTAGCTCAGTCGGTAGAGCACGAGACTCTTAATCTCGGGGTCGTGGGTTCGAGC 61 Query 165770 CCCACGATGGGC 165781 |||||| ||||| Sbjct 62 CCCACGTTGGGC 73 >seq157919 Length=2360 Score = 98.7 bits (108), Expect = 2e-15 Identities = 65/72 (90%), Gaps = 0/72 (0%) Strand=Plus/Plus Query 165710 GCCCGTCTAGCTCAGTCGGTAGAGCGCCAGACTTTTAATCTGGTGGTCGTGGGTTCGAGC 165769 ||||| ||||||||||||||||||| | ||||| ||||||| | |||||||||||||||| Sbjct 1146 GCCCGGCTAGCTCAGTCGGTAGAGCACGAGACTCTTAATCTCGGGGTCGTGGGTTCGAGC 1205 Query 165770 CCCACGATGGGC 165781 |||||| ||||| Sbjct 1206 CCCACGTTGGGC 1217 >seq48536 Length=6089 Score = 98.7 bits (108), Expect = 2e-15 Identities = 65/72 (90%), Gaps = 0/72 (0%) Strand=Plus/Minus Query 165710 GCCCGTCTAGCTCAGTCGGTAGAGCGCCAGACTTTTAATCTGGTGGTCGTGGGTTCGAGC 165769 ||||| ||||||||||||||||||| | ||||| ||||||| | |||||||||||||||| Sbjct 3632 GCCCGGCTAGCTCAGTCGGTAGAGCACGAGACTCTTAATCTCGGGGTCGTGGGTTCGAGC 3573 Query 165770 CCCACGATGGGC 165781 |||||| ||||| Sbjct 3572 CCCACGTTGGGC 3561 >seq15675 Length=10477 Score = 98.7 bits (108), Expect = 2e-15 Identities = 65/72 (90%), Gaps = 0/72 (0%) Strand=Plus/Minus Query 165710 GCCCGTCTAGCTCAGTCGGTAGAGCGCCAGACTTTTAATCTGGTGGTCGTGGGTTCGAGC 165769 ||||| ||||||||||||||||||| | ||||| ||||||| | |||||||||||||||| Sbjct 8987 GCCCGGCTAGCTCAGTCGGTAGAGCACGAGACTCTTAATCTCGGGGTCGTGGGTTCGAGC 8928 Query 165770 CCCACGATGGGC 165781 |||||| ||||| Sbjct 8927 CCCACGTTGGGC 8916 >seq10778 Length=12061 Score = 98.7 bits (108), Expect = 2e-15 Identities = 65/72 (90%), Gaps = 0/72 (0%) Strand=Plus/Plus Query 165710 GCCCGTCTAGCTCAGTCGGTAGAGCGCCAGACTTTTAATCTGGTGGTCGTGGGTTCGAGC 165769 ||||| ||||||||||||||||||| | ||||| ||||||| | |||||||||||||||| Sbjct 9825 GCCCGGCTAGCTCAGTCGGTAGAGCACGAGACTCTTAATCTCGGGGTCGTGGGTTCGAGC 9884 Query 165770 CCCACGATGGGC 165781 |||||| ||||| Sbjct 9885 CCCACGTTGGGC 9896 >seq267693 Length=1199 Score = 95.1 bits (104), Expect = 3e-14 Identities = 65/72 (90%), Gaps = 1/72 (1%) Strand=Plus/Minus Query 165710 GCCCGTCTAGCTCAGTCGGTAGAGCGCCAGACTTTTAATCTGGTGGTCGTGGGTTCGAGC 165769 ||||| ||||||||||||||||||| | ||||| ||||||| | |||||||||||||||| Sbjct 546 GCCCGGCTAGCTCAGTCGGTAGAGCACGAGACTCTTAATCTCG-GGTCGTGGGTTCGAGC 488 Query 165770 CCCACGATGGGC 165781 |||||| ||||| Sbjct 487 CCCACGTTGGGC 476 >seq117302 Length=3190 Score = 95.1 bits (104), Expect = 3e-14 Identities = 64/72 (89%), Gaps = 0/72 (0%) Strand=Plus/Plus Query 165710 GCCCGTCTAGCTCAGTCGGTAGAGCGCCAGACTTTTAATCTGGTGGTCGTGGGTTCGAGC 165769 ||||| |||||| |||||||||||| | ||||| ||||||| | |||||||||||||||| Sbjct 2095 GCCCGGCTAGCTTAGTCGGTAGAGCACGAGACTCTTAATCTCGGGGTCGTGGGTTCGAGC 2154 Query 165770 CCCACGATGGGC 165781 |||||| ||||| Sbjct 2155 CCCACGTTGGGC 2166 >seq19399 Length=9595 Score = 95.1 bits (104), Expect = 3e-14 Identities = 61/67 (91%), Gaps = 0/67 (0%) Strand=Plus/Minus Query 165709 TGCCCGTCTAGCTCAGTCGGTAGAGCGCCAGACTTTTAATCTGGTGGTCGTGGGTTCGAG 165768 |||||| ||||||||||||||||||| | ||||| ||||||| | ||||||||||||||| Sbjct 1355 TGCCCGGCTAGCTCAGTCGGTAGAGCACGAGACTCTTAATCTCGGGGTCGTGGGTTCGAG 1296 Query 165769 CCCCACG 165775 ||||||| Sbjct 1295 CCCCACG 1289 >seq15476 Length=10527 Score = 95.1 bits (104), Expect = 3e-14 Identities = 64/72 (89%), Gaps = 0/72 (0%) Strand=Plus/Plus Query 165710 GCCCGTCTAGCTCAGTCGGTAGAGCGCCAGACTTTTAATCTGGTGGTCGTGGGTTCGAGC 165769 ||||| ||||||||||||||||||| | ||||| ||||||| | |||||||||||||||| Sbjct 1904 GCCCGGCTAGCTCAGTCGGTAGAGCACGAGACTCTTAATCTCGGGGTCGTGGGTTCGAGC 1963 Query 165770 CCCACGATGGGC 165781 |||||| |||| Sbjct 1964 CCCACGTCGGGC 1975 Score = 93.3 bits (102), Expect = 9e-14 Identities = 65/73 (89%), Gaps = 1/73 (1%) Strand=Plus/Plus Query 165710 GCCCGTCTAGCTCAGTCGGTAG-AGCGCCAGACTTTTAATCTGGTGGTCGTGGGTTCGAG 165768 ||||| |||||||||||||||| ||| | ||||| ||||||| | ||||||||||||||| Sbjct 7113 GCCCGGCTAGCTCAGTCGGTAGGAGCACGAGACTCTTAATCTCGGGGTCGTGGGTTCGAG 7172 Query 165769 CCCCACGATGGGC 165781 ||||||| ||||| Sbjct 7173 CCCCACGTTGGGC 7185 Score = 91.5 bits (100), Expect = 3e-13 Identities = 59/65 (91%), Gaps = 0/65 (0%) Strand=Plus/Plus Query 165710 GCCCGTCTAGCTCAGTCGGTAGAGCGCCAGACTTTTAATCTGGTGGTCGTGGGTTCGAGC 165769 ||||| ||||||||||||||||||| | ||||| ||||||| | |||||||||||||||| Sbjct 10463 GCCCGGCTAGCTCAGTCGGTAGAGCACGAGACTCTTAATCTCGGGGTCGTGGGTTCGAGC 10522 Query 165770 CCCAC 165774 ||||| Sbjct 10523 CCCAC 10527 >seq447532 Length=569 Score = 93.3 bits (102), Expect = 9e-14 Identities = 62/69 (90%), Gaps = 0/69 (0%) Strand=Plus/Minus Query 165713 CGTCTAGCTCAGTCGGTAGAGCGCCAGACTTTTAATCTGGTGGTCGTGGGTTCGAGCCCC 165772 || ||||||||||||||||||| | ||||| ||||||| | ||||||||||||||||||| Sbjct 569 CGGCTAGCTCAGTCGGTAGAGCACGAGACTCTTAATCTCGGGGTCGTGGGTTCGAGCCCC 510 Query 165773 ACGATGGGC 165781 ||| ||||| Sbjct 509 ACGTTGGGC 501 >seq416376 Length=638 Score = 93.3 bits (102), Expect = 9e-14 Identities = 60/66 (91%), Gaps = 0/66 (0%) Strand=Plus/Plus Query 165716 CTAGCTCAGTCGGTAGAGCGCCAGACTTTTAATCTGGTGGTCGTGGGTTCGAGCCCCACG 165775 ||||||||||||||||||| | ||||| ||||||| | |||||||||||||||||||||| Sbjct 117 CTAGCTCAGTCGGTAGAGCACGAGACTCTTAATCTCGGGGTCGTGGGTTCGAGCCCCACG 176 Query 165776 ATGGGC 165781 ||||| Sbjct 177 TTGGGC 182 >seq296937 Length=1034 Score = 93.3 bits (102), Expect = 9e-14 Identities = 65/73 (89%), Gaps = 1/73 (1%) Strand=Plus/Minus Query 165710 GCCCGTCTAGCTCAGTCGGTAG-AGCGCCAGACTTTTAATCTGGTGGTCGTGGGTTCGAG 165768 ||||| |||||||||||||||| ||| | ||||| ||||||| | ||||||||||||||| Sbjct 96 GCCCGGCTAGCTCAGTCGGTAGGAGCACGAGACTCTTAATCTCGGGGTCGTGGGTTCGAG 37 Query 165769 CCCCACGATGGGC 165781 ||||||| ||||| Sbjct 36 CCCCACGTTGGGC 24 >seq313629 Length=952 Score = 91.5 bits (100), Expect = 3e-13 Identities = 62/70 (89%), Gaps = 0/70 (0%) Strand=Plus/Plus Query 165712 CCGTCTAGCTCAGTCGGTAGAGCGCCAGACTTTTAATCTGGTGGTCGTGGGTTCGAGCCC 165771 ||| ||||||||||||||||||| | ||| | ||||||| | |||||||||||||||||| Sbjct 427 CCGGCTAGCTCAGTCGGTAGAGCACGAGATTCTTAATCTCGGGGTCGTGGGTTCGAGCCC 486 Query 165772 CACGATGGGC 165781 |||| ||||| Sbjct 487 CACGTTGGGC 496 >seq34060 Length=7396 Score = 91.5 bits (100), Expect = 3e-13 Identities = 59/65 (91%), Gaps = 0/65 (0%) Strand=Plus/Minus Query 165717 TAGCTCAGTCGGTAGAGCGCCAGACTTTTAATCTGGTGGTCGTGGGTTCGAGCCCCACGA 165776 |||||||||||||||||| | ||||| ||||||| | |||||||||||||||||||||| Sbjct 3151 TAGCTCAGTCGGTAGAGCACGAGACTCTTAATCTCGGGGTCGTGGGTTCGAGCCCCACGT 3092 Query 165777 TGGGC 165781 ||||| Sbjct 3091 TGGGC 3087 >seq150905 Length=2479 Score = 89.7 bits (98), Expect = 1e-12 Identities = 60/67 (90%), Gaps = 0/67 (0%) Strand=Plus/Minus Query 165709 TGCCCGTCTAGCTCAGTCGGTAGAGCGCCAGACTTTTAATCTGGTGGTCGTGGGTTCGAG 165768 |||||| ||||||||||||||||||| ||||| ||||||| | ||||||||||||||| Sbjct 2417 TGCCCGGCTAGCTCAGTCGGTAGAGCATGAGACTCTTAATCTCGGGGTCGTGGGTTCGAG 2358 Query 165769 CCCCACG 165775 ||||||| Sbjct 2357 CCCCACG 2351 >seq54355 Length=5686 Score = 89.7 bits (98), Expect = 1e-12 Identities = 63/72 (88%), Gaps = 0/72 (0%) Strand=Plus/Minus Query 165710 GCCCGTCTAGCTCAGTCGGTAGAGCGCCAGACTTTTAATCTGGTGGTCGTGGGTTCGAGC 165769 ||||| ||||||||||||||||||| | ||||| ||||||| | | |||||||||||||| Sbjct 3040 GCCCGGCTAGCTCAGTCGGTAGAGCACGAGACTCTTAATCTCGGGATCGTGGGTTCGAGC 2981 Query 165770 CCCACGATGGGC 165781 || ||| ||||| Sbjct 2980 CCAACGTTGGGC 2969 >seq17338 Length=10062 Score = 89.7 bits (98), Expect = 1e-12 Identities = 63/72 (88%), Gaps = 0/72 (0%) Strand=Plus/Plus Query 165711 CCCGTCTAGCTCAGTCGGTAGAGCGCCAGACTTTTAATCTGGTGGTCGTGGGTTCGAGCC 165770 |||| ||||||||||||||||||| | ||||| ||||||| | |||||||||||||| | Sbjct 9134 CCCGGCTAGCTCAGTCGGTAGAGCACGAGACTCTTAATCTCGGAGTCGTGGGTTCGAGTC 9193 Query 165771 CCACGATGGGCA 165782 ||||| |||||| Sbjct 9194 CCACGTTGGGCA 9205 >seq188816 Length=1911 Score = 87.8 bits (96), Expect = 4e-12 Identities = 57/63 (90%), Gaps = 0/63 (0%) Strand=Plus/Minus Query 165710 GCCCGTCTAGCTCAGTCGGTAGAGCGCCAGACTTTTAATCTGGTGGTCGTGGGTTCGAGC 165769 ||||| ||||||||||||||||||| | ||||| ||||||| | |||||||||||||||| Sbjct 63 GCCCGGCTAGCTCAGTCGGTAGAGCACGAGACTCTTAATCTCGGGGTCGTGGGTTCGAGC 4 Query 165770 CCC 165772 ||| Sbjct 3 CCC 1 >seq36239 Length=7161 Score = 87.8 bits (96), Expect = 4e-12 Identities = 59/66 (89%), Gaps = 0/66 (0%) Strand=Plus/Minus Query 165716 CTAGCTCAGTCGGTAGAGCGCCAGACTTTTAATCTGGTGGTCGTGGGTTCGAGCCCCACG 165775 ||||||||||||||||||| | ||||| ||||||| | |||||||||||||||||||||| Sbjct 7161 CTAGCTCAGTCGGTAGAGCACGAGACTCTTAATCTCGGGGTCGTGGGTTCGAGCCCCACG 7102 Query 165776 ATGGGC 165781 |||| Sbjct 7101 TCGGGC 7096 >seq27187 Length=8237 Score = 87.8 bits (96), Expect = 4e-12 Identities = 64/73 (88%), Gaps = 1/73 (1%) Strand=Plus/Minus Query 165710 GCCCGTCTAGCTCAGTCGGTAG-AGCGCCAGACTTTTAATCTGGTGGTCGTGGGTTCGAG 165768 ||||| |||||||||||||||| ||| | ||||| ||||||| | |||||||||||||| Sbjct 7030 GCCCGGCTAGCTCAGTCGGTAGGAGCACGAGACTCTTAATCTCGGGGTCGTGGGTTCGAC 6971 Query 165769 CCCCACGATGGGC 165781 ||||||| ||||| Sbjct 6970 CCCCACGTTGGGC 6958 >seq224796 Length=1527 Score = 86.0 bits (94), Expect = 1e-11 Identities = 61/70 (87%), Gaps = 0/70 (0%) Strand=Plus/Plus Query 165710 GCCCGTCTAGCTCAGTCGGTAGAGCGCCAGACTTTTAATCTGGTGGTCGTGGGTTCGAGC 165769 ||||| | ||||||||||||||||| | ||||| ||||||| |||||||||||||||| Sbjct 56 GCCCGGCAAGCTCAGTCGGTAGAGCACGAGACTCTTAATCTCTGGGTCGTGGGTTCGAGC 115 Query 165770 CCCACGATGG 165779 |||||| ||| Sbjct 116 CCCACGTTGG 125 >seq1017 Length=23742 Score = 84.2 bits (92), Expect = 5e-11 Identities = 61/71 (86%), Gaps = 0/71 (0%) Strand=Plus/Minus Query 165712 CCGTCTAGCTCAGTCGGTAGAGCGCCAGACTTTTAATCTGGTGGTCGTGGGTTCGAGCCC 165771 ||| ||||||||||||||||||| | ||| | ||| ||| | ||||||||||||||| || Sbjct 9291 CCGGCTAGCTCAGTCGGTAGAGCACGAGATTCTTAGTCTCGGGGTCGTGGGTTCGAGTCC 9232 Query 165772 CACGATGGGCA 165782 |||| |||||| Sbjct 9231 CACGTTGGGCA 9221 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1051285908525480