Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Spirometra_20erinaceieuropaei_20[genbank_20GCA_5F000951995.1_202014-
09-26] 482,396 sequences; 1,258,717,181 total letters
Query= NC_000852.5
Length=330611
Score E
Sequences producing significant alignments: (Bits) Value
seq5131 104 5e-17
seq381426 102 2e-16
seq327860 98.7 2e-15
seq157919 98.7 2e-15
seq48536 98.7 2e-15
seq15675 98.7 2e-15
seq10778 98.7 2e-15
seq267693 95.1 3e-14
seq117302 95.1 3e-14
seq19399 95.1 3e-14
seq15476 95.1 3e-14
seq447532 93.3 9e-14
seq416376 93.3 9e-14
seq296937 93.3 9e-14
seq313629 91.5 3e-13
seq34060 91.5 3e-13
seq150905 89.7 1e-12
seq54355 89.7 1e-12
seq17338 89.7 1e-12
seq188816 87.8 4e-12
seq36239 87.8 4e-12
seq27187 87.8 4e-12
seq224796 86.0 1e-11
seq1017 84.2 5e-11
>seq5131
Length=15476
Score = 104 bits (114), Expect = 5e-17
Identities = 66/72 (92%), Gaps = 0/72 (0%)
Strand=Plus/Minus
Query 165710 GCCCGTCTAGCTCAGTCGGTAGAGCGCCAGACTTTTAATCTGGTGGTCGTGGGTTCGAGC 165769
||||| ||||||||||||||||||| | ||||||||||||| | ||||||||||||||||
Sbjct 6148 GCCCGGCTAGCTCAGTCGGTAGAGCACGAGACTTTTAATCTCGGGGTCGTGGGTTCGAGC 6089
Query 165770 CCCACGATGGGC 165781
|||||| |||||
Sbjct 6088 CCCACGTTGGGC 6077
Score = 95.1 bits (104), Expect = 3e-14
Identities = 64/72 (89%), Gaps = 0/72 (0%)
Strand=Plus/Plus
Query 165710 GCCCGTCTAGCTCAGTCGGTAGAGCGCCAGACTTTTAATCTGGTGGTCGTGGGTTCGAGC 165769
||||| ||||||||||||||||||| | ||||| ||||||| | |||||||| |||||||
Sbjct 3472 GCCCGGCTAGCTCAGTCGGTAGAGCACGAGACTCTTAATCTCGGGGTCGTGGATTCGAGC 3531
Query 165770 CCCACGATGGGC 165781
|||||| |||||
Sbjct 3532 CCCACGTTGGGC 3543
>seq381426
Length=715
Score = 102 bits (112), Expect = 2e-16
Identities = 67/74 (91%), Gaps = 0/74 (0%)
Strand=Plus/Minus
Query 165710 GCCCGTCTAGCTCAGTCGGTAGAGCGCCAGACTTTTAATCTGGTGGTCGTGGGTTCGAGC 165769
||||| ||||||||||||||||||| | ||||| ||||||| | ||||||||||||||||
Sbjct 215 GCCCGGCTAGCTCAGTCGGTAGAGCACGAGACTCTTAATCTCGGGGTCGTGGGTTCGAGC 156
Query 165770 CCCACGATGGGCAT 165783
|||||| |||||||
Sbjct 155 CCCACGTTGGGCAT 142
>seq327860
Length=890
Score = 98.7 bits (108), Expect = 2e-15
Identities = 65/72 (90%), Gaps = 0/72 (0%)
Strand=Plus/Plus
Query 165710 GCCCGTCTAGCTCAGTCGGTAGAGCGCCAGACTTTTAATCTGGTGGTCGTGGGTTCGAGC 165769
||||| ||||||||||||||||||| | ||||| ||||||| | ||||||||||||||||
Sbjct 2 GCCCGGCTAGCTCAGTCGGTAGAGCACGAGACTCTTAATCTCGGGGTCGTGGGTTCGAGC 61
Query 165770 CCCACGATGGGC 165781
|||||| |||||
Sbjct 62 CCCACGTTGGGC 73
>seq157919
Length=2360
Score = 98.7 bits (108), Expect = 2e-15
Identities = 65/72 (90%), Gaps = 0/72 (0%)
Strand=Plus/Plus
Query 165710 GCCCGTCTAGCTCAGTCGGTAGAGCGCCAGACTTTTAATCTGGTGGTCGTGGGTTCGAGC 165769
||||| ||||||||||||||||||| | ||||| ||||||| | ||||||||||||||||
Sbjct 1146 GCCCGGCTAGCTCAGTCGGTAGAGCACGAGACTCTTAATCTCGGGGTCGTGGGTTCGAGC 1205
Query 165770 CCCACGATGGGC 165781
|||||| |||||
Sbjct 1206 CCCACGTTGGGC 1217
>seq48536
Length=6089
Score = 98.7 bits (108), Expect = 2e-15
Identities = 65/72 (90%), Gaps = 0/72 (0%)
Strand=Plus/Minus
Query 165710 GCCCGTCTAGCTCAGTCGGTAGAGCGCCAGACTTTTAATCTGGTGGTCGTGGGTTCGAGC 165769
||||| ||||||||||||||||||| | ||||| ||||||| | ||||||||||||||||
Sbjct 3632 GCCCGGCTAGCTCAGTCGGTAGAGCACGAGACTCTTAATCTCGGGGTCGTGGGTTCGAGC 3573
Query 165770 CCCACGATGGGC 165781
|||||| |||||
Sbjct 3572 CCCACGTTGGGC 3561
>seq15675
Length=10477
Score = 98.7 bits (108), Expect = 2e-15
Identities = 65/72 (90%), Gaps = 0/72 (0%)
Strand=Plus/Minus
Query 165710 GCCCGTCTAGCTCAGTCGGTAGAGCGCCAGACTTTTAATCTGGTGGTCGTGGGTTCGAGC 165769
||||| ||||||||||||||||||| | ||||| ||||||| | ||||||||||||||||
Sbjct 8987 GCCCGGCTAGCTCAGTCGGTAGAGCACGAGACTCTTAATCTCGGGGTCGTGGGTTCGAGC 8928
Query 165770 CCCACGATGGGC 165781
|||||| |||||
Sbjct 8927 CCCACGTTGGGC 8916
>seq10778
Length=12061
Score = 98.7 bits (108), Expect = 2e-15
Identities = 65/72 (90%), Gaps = 0/72 (0%)
Strand=Plus/Plus
Query 165710 GCCCGTCTAGCTCAGTCGGTAGAGCGCCAGACTTTTAATCTGGTGGTCGTGGGTTCGAGC 165769
||||| ||||||||||||||||||| | ||||| ||||||| | ||||||||||||||||
Sbjct 9825 GCCCGGCTAGCTCAGTCGGTAGAGCACGAGACTCTTAATCTCGGGGTCGTGGGTTCGAGC 9884
Query 165770 CCCACGATGGGC 165781
|||||| |||||
Sbjct 9885 CCCACGTTGGGC 9896
>seq267693
Length=1199
Score = 95.1 bits (104), Expect = 3e-14
Identities = 65/72 (90%), Gaps = 1/72 (1%)
Strand=Plus/Minus
Query 165710 GCCCGTCTAGCTCAGTCGGTAGAGCGCCAGACTTTTAATCTGGTGGTCGTGGGTTCGAGC 165769
||||| ||||||||||||||||||| | ||||| ||||||| | ||||||||||||||||
Sbjct 546 GCCCGGCTAGCTCAGTCGGTAGAGCACGAGACTCTTAATCTCG-GGTCGTGGGTTCGAGC 488
Query 165770 CCCACGATGGGC 165781
|||||| |||||
Sbjct 487 CCCACGTTGGGC 476
>seq117302
Length=3190
Score = 95.1 bits (104), Expect = 3e-14
Identities = 64/72 (89%), Gaps = 0/72 (0%)
Strand=Plus/Plus
Query 165710 GCCCGTCTAGCTCAGTCGGTAGAGCGCCAGACTTTTAATCTGGTGGTCGTGGGTTCGAGC 165769
||||| |||||| |||||||||||| | ||||| ||||||| | ||||||||||||||||
Sbjct 2095 GCCCGGCTAGCTTAGTCGGTAGAGCACGAGACTCTTAATCTCGGGGTCGTGGGTTCGAGC 2154
Query 165770 CCCACGATGGGC 165781
|||||| |||||
Sbjct 2155 CCCACGTTGGGC 2166
>seq19399
Length=9595
Score = 95.1 bits (104), Expect = 3e-14
Identities = 61/67 (91%), Gaps = 0/67 (0%)
Strand=Plus/Minus
Query 165709 TGCCCGTCTAGCTCAGTCGGTAGAGCGCCAGACTTTTAATCTGGTGGTCGTGGGTTCGAG 165768
|||||| ||||||||||||||||||| | ||||| ||||||| | |||||||||||||||
Sbjct 1355 TGCCCGGCTAGCTCAGTCGGTAGAGCACGAGACTCTTAATCTCGGGGTCGTGGGTTCGAG 1296
Query 165769 CCCCACG 165775
|||||||
Sbjct 1295 CCCCACG 1289
>seq15476
Length=10527
Score = 95.1 bits (104), Expect = 3e-14
Identities = 64/72 (89%), Gaps = 0/72 (0%)
Strand=Plus/Plus
Query 165710 GCCCGTCTAGCTCAGTCGGTAGAGCGCCAGACTTTTAATCTGGTGGTCGTGGGTTCGAGC 165769
||||| ||||||||||||||||||| | ||||| ||||||| | ||||||||||||||||
Sbjct 1904 GCCCGGCTAGCTCAGTCGGTAGAGCACGAGACTCTTAATCTCGGGGTCGTGGGTTCGAGC 1963
Query 165770 CCCACGATGGGC 165781
|||||| ||||
Sbjct 1964 CCCACGTCGGGC 1975
Score = 93.3 bits (102), Expect = 9e-14
Identities = 65/73 (89%), Gaps = 1/73 (1%)
Strand=Plus/Plus
Query 165710 GCCCGTCTAGCTCAGTCGGTAG-AGCGCCAGACTTTTAATCTGGTGGTCGTGGGTTCGAG 165768
||||| |||||||||||||||| ||| | ||||| ||||||| | |||||||||||||||
Sbjct 7113 GCCCGGCTAGCTCAGTCGGTAGGAGCACGAGACTCTTAATCTCGGGGTCGTGGGTTCGAG 7172
Query 165769 CCCCACGATGGGC 165781
||||||| |||||
Sbjct 7173 CCCCACGTTGGGC 7185
Score = 91.5 bits (100), Expect = 3e-13
Identities = 59/65 (91%), Gaps = 0/65 (0%)
Strand=Plus/Plus
Query 165710 GCCCGTCTAGCTCAGTCGGTAGAGCGCCAGACTTTTAATCTGGTGGTCGTGGGTTCGAGC 165769
||||| ||||||||||||||||||| | ||||| ||||||| | ||||||||||||||||
Sbjct 10463 GCCCGGCTAGCTCAGTCGGTAGAGCACGAGACTCTTAATCTCGGGGTCGTGGGTTCGAGC 10522
Query 165770 CCCAC 165774
|||||
Sbjct 10523 CCCAC 10527
>seq447532
Length=569
Score = 93.3 bits (102), Expect = 9e-14
Identities = 62/69 (90%), Gaps = 0/69 (0%)
Strand=Plus/Minus
Query 165713 CGTCTAGCTCAGTCGGTAGAGCGCCAGACTTTTAATCTGGTGGTCGTGGGTTCGAGCCCC 165772
|| ||||||||||||||||||| | ||||| ||||||| | |||||||||||||||||||
Sbjct 569 CGGCTAGCTCAGTCGGTAGAGCACGAGACTCTTAATCTCGGGGTCGTGGGTTCGAGCCCC 510
Query 165773 ACGATGGGC 165781
||| |||||
Sbjct 509 ACGTTGGGC 501
>seq416376
Length=638
Score = 93.3 bits (102), Expect = 9e-14
Identities = 60/66 (91%), Gaps = 0/66 (0%)
Strand=Plus/Plus
Query 165716 CTAGCTCAGTCGGTAGAGCGCCAGACTTTTAATCTGGTGGTCGTGGGTTCGAGCCCCACG 165775
||||||||||||||||||| | ||||| ||||||| | ||||||||||||||||||||||
Sbjct 117 CTAGCTCAGTCGGTAGAGCACGAGACTCTTAATCTCGGGGTCGTGGGTTCGAGCCCCACG 176
Query 165776 ATGGGC 165781
|||||
Sbjct 177 TTGGGC 182
>seq296937
Length=1034
Score = 93.3 bits (102), Expect = 9e-14
Identities = 65/73 (89%), Gaps = 1/73 (1%)
Strand=Plus/Minus
Query 165710 GCCCGTCTAGCTCAGTCGGTAG-AGCGCCAGACTTTTAATCTGGTGGTCGTGGGTTCGAG 165768
||||| |||||||||||||||| ||| | ||||| ||||||| | |||||||||||||||
Sbjct 96 GCCCGGCTAGCTCAGTCGGTAGGAGCACGAGACTCTTAATCTCGGGGTCGTGGGTTCGAG 37
Query 165769 CCCCACGATGGGC 165781
||||||| |||||
Sbjct 36 CCCCACGTTGGGC 24
>seq313629
Length=952
Score = 91.5 bits (100), Expect = 3e-13
Identities = 62/70 (89%), Gaps = 0/70 (0%)
Strand=Plus/Plus
Query 165712 CCGTCTAGCTCAGTCGGTAGAGCGCCAGACTTTTAATCTGGTGGTCGTGGGTTCGAGCCC 165771
||| ||||||||||||||||||| | ||| | ||||||| | ||||||||||||||||||
Sbjct 427 CCGGCTAGCTCAGTCGGTAGAGCACGAGATTCTTAATCTCGGGGTCGTGGGTTCGAGCCC 486
Query 165772 CACGATGGGC 165781
|||| |||||
Sbjct 487 CACGTTGGGC 496
>seq34060
Length=7396
Score = 91.5 bits (100), Expect = 3e-13
Identities = 59/65 (91%), Gaps = 0/65 (0%)
Strand=Plus/Minus
Query 165717 TAGCTCAGTCGGTAGAGCGCCAGACTTTTAATCTGGTGGTCGTGGGTTCGAGCCCCACGA 165776
|||||||||||||||||| | ||||| ||||||| | ||||||||||||||||||||||
Sbjct 3151 TAGCTCAGTCGGTAGAGCACGAGACTCTTAATCTCGGGGTCGTGGGTTCGAGCCCCACGT 3092
Query 165777 TGGGC 165781
|||||
Sbjct 3091 TGGGC 3087
>seq150905
Length=2479
Score = 89.7 bits (98), Expect = 1e-12
Identities = 60/67 (90%), Gaps = 0/67 (0%)
Strand=Plus/Minus
Query 165709 TGCCCGTCTAGCTCAGTCGGTAGAGCGCCAGACTTTTAATCTGGTGGTCGTGGGTTCGAG 165768
|||||| ||||||||||||||||||| ||||| ||||||| | |||||||||||||||
Sbjct 2417 TGCCCGGCTAGCTCAGTCGGTAGAGCATGAGACTCTTAATCTCGGGGTCGTGGGTTCGAG 2358
Query 165769 CCCCACG 165775
|||||||
Sbjct 2357 CCCCACG 2351
>seq54355
Length=5686
Score = 89.7 bits (98), Expect = 1e-12
Identities = 63/72 (88%), Gaps = 0/72 (0%)
Strand=Plus/Minus
Query 165710 GCCCGTCTAGCTCAGTCGGTAGAGCGCCAGACTTTTAATCTGGTGGTCGTGGGTTCGAGC 165769
||||| ||||||||||||||||||| | ||||| ||||||| | | ||||||||||||||
Sbjct 3040 GCCCGGCTAGCTCAGTCGGTAGAGCACGAGACTCTTAATCTCGGGATCGTGGGTTCGAGC 2981
Query 165770 CCCACGATGGGC 165781
|| ||| |||||
Sbjct 2980 CCAACGTTGGGC 2969
>seq17338
Length=10062
Score = 89.7 bits (98), Expect = 1e-12
Identities = 63/72 (88%), Gaps = 0/72 (0%)
Strand=Plus/Plus
Query 165711 CCCGTCTAGCTCAGTCGGTAGAGCGCCAGACTTTTAATCTGGTGGTCGTGGGTTCGAGCC 165770
|||| ||||||||||||||||||| | ||||| ||||||| | |||||||||||||| |
Sbjct 9134 CCCGGCTAGCTCAGTCGGTAGAGCACGAGACTCTTAATCTCGGAGTCGTGGGTTCGAGTC 9193
Query 165771 CCACGATGGGCA 165782
||||| ||||||
Sbjct 9194 CCACGTTGGGCA 9205
>seq188816
Length=1911
Score = 87.8 bits (96), Expect = 4e-12
Identities = 57/63 (90%), Gaps = 0/63 (0%)
Strand=Plus/Minus
Query 165710 GCCCGTCTAGCTCAGTCGGTAGAGCGCCAGACTTTTAATCTGGTGGTCGTGGGTTCGAGC 165769
||||| ||||||||||||||||||| | ||||| ||||||| | ||||||||||||||||
Sbjct 63 GCCCGGCTAGCTCAGTCGGTAGAGCACGAGACTCTTAATCTCGGGGTCGTGGGTTCGAGC 4
Query 165770 CCC 165772
|||
Sbjct 3 CCC 1
>seq36239
Length=7161
Score = 87.8 bits (96), Expect = 4e-12
Identities = 59/66 (89%), Gaps = 0/66 (0%)
Strand=Plus/Minus
Query 165716 CTAGCTCAGTCGGTAGAGCGCCAGACTTTTAATCTGGTGGTCGTGGGTTCGAGCCCCACG 165775
||||||||||||||||||| | ||||| ||||||| | ||||||||||||||||||||||
Sbjct 7161 CTAGCTCAGTCGGTAGAGCACGAGACTCTTAATCTCGGGGTCGTGGGTTCGAGCCCCACG 7102
Query 165776 ATGGGC 165781
||||
Sbjct 7101 TCGGGC 7096
>seq27187
Length=8237
Score = 87.8 bits (96), Expect = 4e-12
Identities = 64/73 (88%), Gaps = 1/73 (1%)
Strand=Plus/Minus
Query 165710 GCCCGTCTAGCTCAGTCGGTAG-AGCGCCAGACTTTTAATCTGGTGGTCGTGGGTTCGAG 165768
||||| |||||||||||||||| ||| | ||||| ||||||| | ||||||||||||||
Sbjct 7030 GCCCGGCTAGCTCAGTCGGTAGGAGCACGAGACTCTTAATCTCGGGGTCGTGGGTTCGAC 6971
Query 165769 CCCCACGATGGGC 165781
||||||| |||||
Sbjct 6970 CCCCACGTTGGGC 6958
>seq224796
Length=1527
Score = 86.0 bits (94), Expect = 1e-11
Identities = 61/70 (87%), Gaps = 0/70 (0%)
Strand=Plus/Plus
Query 165710 GCCCGTCTAGCTCAGTCGGTAGAGCGCCAGACTTTTAATCTGGTGGTCGTGGGTTCGAGC 165769
||||| | ||||||||||||||||| | ||||| ||||||| ||||||||||||||||
Sbjct 56 GCCCGGCAAGCTCAGTCGGTAGAGCACGAGACTCTTAATCTCTGGGTCGTGGGTTCGAGC 115
Query 165770 CCCACGATGG 165779
|||||| |||
Sbjct 116 CCCACGTTGG 125
>seq1017
Length=23742
Score = 84.2 bits (92), Expect = 5e-11
Identities = 61/71 (86%), Gaps = 0/71 (0%)
Strand=Plus/Minus
Query 165712 CCGTCTAGCTCAGTCGGTAGAGCGCCAGACTTTTAATCTGGTGGTCGTGGGTTCGAGCCC 165771
||| ||||||||||||||||||| | ||| | ||| ||| | ||||||||||||||| ||
Sbjct 9291 CCGGCTAGCTCAGTCGGTAGAGCACGAGATTCTTAGTCTCGGGGTCGTGGGTTCGAGTCC 9232
Query 165772 CACGATGGGCA 165782
|||| ||||||
Sbjct 9231 CACGTTGGGCA 9221
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1051285908525480
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |