Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Spirometra_20erinaceieuropaei_20[genbank_20GCA_5F000951995.1_202014-
09-26] 482,396 sequences; 1,258,717,181 total letters
Query= NC_003389.1
Length=146454
Score E
Sequences producing significant alignments: (Bits) Value
seq257780 98.7 9e-16
>seq257780
Length=1265
Score = 98.7 bits (108), Expect = 9e-16
Identities = 228/344 (66%), Gaps = 0/344 (0%)
Strand=Plus/Minus
Query 11432 ACTTTTTCACAACCTAACTCTGTTAATAATCTATCTGCGACGAATTCTATATACTGAGAC 11491
|| |||||| | || ||||| |||| | | ||| || || | || ||||| | |
Sbjct 663 ACCTTTTCAAAGCCCAACTCAGTTAGGAGACGATCGGCAACATAACGGATGTACTGGGCC 604
Query 11492 ATTAAACAACAATTCATACCTATAAGATCCACCGGAATAGCAACTGTCAAAAACTCCTTT 11551
|| | || || ||||| || || | ||||| |||| ||| | |||| ||| ||| |
Sbjct 603 ATCAGACGGCAGTTCATGCCGATCAAGTCCACAGGAAGAGCGTCAGTCAGAAATTCCACT 544
Query 11552 TCTATATTAACCGCATCAATGATTATCGACGTTATAACTTCCTTAGATGGTGGATGTAAT 11611
|| |||| ||| || || || |||| || |||||||| ||| | |
Sbjct 543 TCGATATCAACAGCTTCCCGCATAATCGCTTCTACGCGCTCCTTAGAGGGTTTGTTTCTG 484
Query 11612 AAATGTTTAAACATTAAACACGCAAAATCACAATGTAAACCTTCGTCTCTACTTATTAGT 11671
| ||| |||| | ||| || || ||| || | || || || | |||||||||
Sbjct 483 ATGTGTCGGAACAGAAGACAAGCGAAGTCAGTGTGAAGTCCCTCATCACGGCTTATTAGT 424
Query 11672 TCATTAGAAAATGTTAATCCGGGCATCAATCCTCGtttttttATCCAAAATATAGCAGCA 11731
||||| ||||| || || ||||| | || || || || | ||| || || | |||
Sbjct 423 TCATTGCTGAATGTCAACCCTGGCATAAGCCCACGCTTCTTCAGCCAGAAGATGGACGCA 364
Query 11732 AATGAACCAGAAAAGAATATTCCCTCCACAGCTGCAAATGCTAC 11775
|| || ||||||||||| | ||||| || |||||||| |||||
Sbjct 363 AACGACCCAGAAAAGAAAACCCCCTCTACGGCTGCAAAGGCTAC 320
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 465699618882240
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |