Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Spirometra_20erinaceieuropaei_20[genbank_20GCA_5F000951995.1_202014- 09-26] 482,396 sequences; 1,258,717,181 total letters Query= NC_003389.1 Length=146454 Score E Sequences producing significant alignments: (Bits) Value seq257780 98.7 9e-16 >seq257780 Length=1265 Score = 98.7 bits (108), Expect = 9e-16 Identities = 228/344 (66%), Gaps = 0/344 (0%) Strand=Plus/Minus Query 11432 ACTTTTTCACAACCTAACTCTGTTAATAATCTATCTGCGACGAATTCTATATACTGAGAC 11491 || |||||| | || ||||| |||| | | ||| || || | || ||||| | | Sbjct 663 ACCTTTTCAAAGCCCAACTCAGTTAGGAGACGATCGGCAACATAACGGATGTACTGGGCC 604 Query 11492 ATTAAACAACAATTCATACCTATAAGATCCACCGGAATAGCAACTGTCAAAAACTCCTTT 11551 || | || || ||||| || || | ||||| |||| ||| | |||| ||| ||| | Sbjct 603 ATCAGACGGCAGTTCATGCCGATCAAGTCCACAGGAAGAGCGTCAGTCAGAAATTCCACT 544 Query 11552 TCTATATTAACCGCATCAATGATTATCGACGTTATAACTTCCTTAGATGGTGGATGTAAT 11611 || |||| ||| || || || |||| || |||||||| ||| | | Sbjct 543 TCGATATCAACAGCTTCCCGCATAATCGCTTCTACGCGCTCCTTAGAGGGTTTGTTTCTG 484 Query 11612 AAATGTTTAAACATTAAACACGCAAAATCACAATGTAAACCTTCGTCTCTACTTATTAGT 11671 | ||| |||| | ||| || || ||| || | || || || | ||||||||| Sbjct 483 ATGTGTCGGAACAGAAGACAAGCGAAGTCAGTGTGAAGTCCCTCATCACGGCTTATTAGT 424 Query 11672 TCATTAGAAAATGTTAATCCGGGCATCAATCCTCGtttttttATCCAAAATATAGCAGCA 11731 ||||| ||||| || || ||||| | || || || || | ||| || || | ||| Sbjct 423 TCATTGCTGAATGTCAACCCTGGCATAAGCCCACGCTTCTTCAGCCAGAAGATGGACGCA 364 Query 11732 AATGAACCAGAAAAGAATATTCCCTCCACAGCTGCAAATGCTAC 11775 || || ||||||||||| | ||||| || |||||||| ||||| Sbjct 363 AACGACCCAGAAAAGAAAACCCCCTCTACGGCTGCAAAGGCTAC 320 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 465699618882240