Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Spirometra_20erinaceieuropaei_20[genbank_20GCA_5F000951995.1_202014-
09-26] 482,396 sequences; 1,258,717,181 total letters
Query= NC_007346.1
Length=407339
Score E
Sequences producing significant alignments: (Bits) Value
seq219432 147 6e-30
>seq219432
Length=1578
Score = 147 bits (162), Expect = 6e-30
Identities = 404/602 (67%), Gaps = 38/602 (6%)
Strand=Plus/Plus
Query 363547 TTCACGCACGCCACGCCAACAATGTACAATGCTGGAACTCGTAATCCACAGATGTCTTCT 363606
||||||||||| | ||||| ||| || | || || | | || |||||||| |
Sbjct 182 TTCACGCACGCATCTCCAACCCTGTTTAACTCGGGGACCCCTTTGCCCCAGATGTCCAGT 241
Query 363607 TGCTTTCTTCTAAAAATGAAGGACGATTCCATCGAGGGTATCTTTGACACACTTAAGAAT 363666
|| | |||||| | ||||||||||| ||| ||||| || | ||| ||| | ||| |
Sbjct 242 TGTTATCTTCTCACCATGAAGGACGACAGCATAGAGGGCATTTATGATACATTAAAGCAG 301
Query 363667 TGTGCTCTTATTTCCAAGAATGCAGGCGGAATTGGTGTATCGATCCACAATGTTCGT-GC 363725
||||| ||||| ||||| ||||| ||||| || ||| | ||| |||| | ||
Sbjct 302 TGTGCGCTTATATCCAAAAATGCTGGCGGCATCGGTCT---------CAACGTTCATTGC 352
Query 363726 A-CAGAA-CA--GTTACATTC---GCGGC-ACAGGGGGATACTCGAATGGGCTGGTTCCC 363777
| ||||| || | ||| || |||| ||| ||| | || || || |||||||
Sbjct 353 ATCAGAAGCAAGGGTACTTTTATAGCGGGTACAAATGGAGAGTCCAACGGTTTGGTTCCA 412
Query 363778 ATGCTTCGTGTGTTTGACAATACTGCGAGGTACGTCGACCAGGGTGGAGGAAAGCGCAAA 363837
||||| || || | |||| || || |||| || || ||||| ||| || || |
Sbjct 413 ATGCTCCGCGTTTACAACAACACCGCCCGGTATGTTGATCAGGGCGGAAACAAACGGCCA 472
Query 363838 GGGGCGTTTGCTATGTATCTCGAGCCTCATCATGCCGATATTTTTGAGTTTCTTGAGCTC 363897
|| || || || || || || || || || | || ||| | ||||| | |||||
Sbjct 473 GGCGCCTTCGCGATTTACCTAGAACCATGGCACCCAGACATTCTGCAGTTTGTAGAGCTG 532
Query 363898 CGGAAAAACACGGGAAAAGAGGAATTGCGTGCACGTGATCTGTTCTATGCACTTTGGGTT 363957
|| |||||||| || || ||| | | |||||||| ||| | || || ||| ||
Sbjct 533 CGCAAAAACACTGGCGCTGAAGAAACTAGAACTCGTGATCTCTTCCACGCTCTCTGGATT 592
Query 363958 TCTGACCATTTTATGAAGCGCGTGGAGGCAGGTAAGAATTGGTCACTCTTTTGC--CCAC 364015
|||||| |||||| ||||| | || | || ||| ||||| || || |
Sbjct 593 CCTGACCTATTTATGCGACGCGTCCAAGCCAACGACAAGTGG--ACTCTAATGGATCCTC 650
Query 364016 ACGAATGTCCAGGTCTTTCCGA-TGTATGGGGTGACGACT-----ATGTTGCTCTATACG 364069
| || ||||||||||| | ||| ||| |||||||| || | | |||| |||||
Sbjct 651 ATGAGTGTCCAGGTCTATTCGACTGT-TGGGGTGAAGAATTCGAAAAGTTG---TATAC- 705
Query 364070 AAAAGTATGAATCGG-AGGGAAAGGCTCGTAAGACAATTCCCGCAC-AGAAGCTATGGTT 364127
||| || || |||| |||||||||| || ||||| |||| || | ||||| | ||||
Sbjct 706 -AAAATACGAGTCGGAAGGGAAAGGC-CGCAAGACTCTTCCAGCCCAAGAAG-TGTGGTA 762
Query 364128 TG 364129
||
Sbjct 763 TG 764
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1295297964033672
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |