Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Spirometra_20erinaceieuropaei_20[genbank_20GCA_5F000951995.1_202014-
09-26] 482,396 sequences; 1,258,717,181 total letters
Query= NC_007767.1
Length=132959
Score E
Sequences producing significant alignments: (Bits) Value
seq46948 87.8 2e-12
>seq46948
Length=6204
Score = 87.8 bits (96), Expect = 2e-12
Identities = 147/213 (69%), Gaps = 0/213 (0%)
Strand=Plus/Plus
Query 115286 ATGCAAATTTTTGTCAAAACGCTCACGGGAAAAACCATTACCGTCGAAACGGAGTCCAGC 115345
||||| || ||||| || || | ||||| || || |||||| | || ||| |||||
Sbjct 1071 ATGCAGATCTTTGTAAAGACCTTGACGGGCAAGACGATTACCCTGGAGGTCGAGCCCAGC 1130
Query 115346 GACACTGTTGGACAAGTAAAACAAAAAATTGCCGATAAAGAAGGCGTCCCCGTTGATCAG 115405
||| || ||| | || ||| ||| || || ||||||||| |||| || ||
Sbjct 1131 GACTCTATTGAGAATGTGAAAGCAAAGATCCAGGACAAAGAAGGCATCCCGCCGGACCAA 1190
Query 115406 CAAAGACTTATTTATGCGGGCAAACAATTAGAAGATGACAAAACCATGGCCGATTATAAC 115465
|| || | || | || ||||||||| | || |||| | || | ||||||| |||
Sbjct 1191 CAGAGGTTGATCTTCGCCGGCAAACAACTTGAGGATGGCCGTACTCTTTCCGATTACAAC 1250
Query 115466 ATTCAAAAAGAGTCTACTATACATATGGTGTTG 115498
|||||||| ||||| || | ||| |||| |||
Sbjct 1251 ATTCAAAAGGAGTCAACCCTGCATTTGGTCTTG 1283
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 422843317023520
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |