Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Spirometra_20erinaceieuropaei_20[genbank_20GCA_5F000951995.1_202014- 09-26] 482,396 sequences; 1,258,717,181 total letters Query= NC_008518.1 Length=174059 Score E Sequences producing significant alignments: (Bits) Value seq257780 134 2e-26 >seq257780 Length=1265 Score = 134 bits (148), Expect = 2e-26 Identities = 305/464 (66%), Gaps = 41/464 (9%) Strand=Plus/Minus Query 93092 CACGCAAAGTCGGTATGTAAACCTTCGTCTCGTGATATCAACTCATTGCTGAATGTTAAA 93151 || || ||||| || || | || || || || ||| | |||||||||||||| || Sbjct 465 CAAGCGAAGTCAGTGTGAAGTCCCTCATCACGGCTTATTAGTTCATTGCTGAATGTCAAC 406 Query 93152 CCTGGTAACAGTCCTCGTTTCTTGAGCCAAAATATTGAAGCAAAACTACCAGaaaaaaaT 93211 ||||| | || || || ||||| ||||| || || || ||||| |||||||| || Sbjct 405 CCTGGCATAAGCCCACGCTTCTTCAGCCAGAAGATGGACGCAAACGACCCAGAAAAGAAA 346 Query 93212 ATACCTTCCACGGCTGCAAATGCCACAATACGTTCGGCAAAATTTGCGGAATTACTG--- 93268 | || || ||||||||||| || || | || || | ||| | ||| || | Sbjct 345 ACCCCCTCTACGGCTGCAAAGGCTACCAGGCGCTCTGGAAACGT---GGATTTTGAGTCA 289 Query 93269 CTGATCCATTTTAAAGCCCAATCGGCTTTTTTCTTAATACAAGGTAGTGTTTCGATAGCG 93328 | ||||| || | ||||| || || || || || | ||| || || |||| | ||| Sbjct 288 CCAATCCACTTGAGTGCCCAGTCAGCCTTCTTTTTCACACAGGGAAGGGTTTGTACTGCG 229 Query 93329 TTAAATAGGTAATCTCGCT-----------------------------CGTCCGA----A 93355 ||||| || || ||||| ||| ||| | Sbjct 228 TTAAAGAG--AAAGTCGCTAAAAATAAAATAAGAGTTAGAGGAAGTACCGTTCGATAGGA 171 Query 93356 TCTCGTATGTATGTATCGATTAACAGAGAATACATTTCAGAATGGACATTCTCCATTGCA 93415 || ||||| || ||||| | ||||||||||| || || || | ||| || |||||| Sbjct 170 TCCTTGATGTACGTGTCGATGAGGAGAGAATACATCTCCGAGTGAATATTTTCGATTGCA 111 Query 93416 ATTTGGAATCCGTAGAAACATCTAGCTTCCGTGATCTGCACTTCTTGAGAAAATCTCTCT 93475 ||||||||||| ||||| || | |||||||| || || ||||||||| || | || Sbjct 110 ATTTGGAATCCATAGAAGCAACGAGCTTCCGGGACTTGTACTTCTTGACTGAAACGTTCC 51 Query 93476 ACGAGATTTTCATTGACTATACCATCGGATGCTGCaaaaaaaGC 93519 || || || || |||||||| || ||| ||| |||||||| || Sbjct 50 ACAAGGTTCTCGTTGACTATCCCGTCGCTTGCGGCAAAAAATGC 7 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 553502957219040