Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Spirometra_20erinaceieuropaei_20[genbank_20GCA_5F000951995.1_202014- 09-26] 482,396 sequences; 1,258,717,181 total letters Query= NC_009127.1 Length=295146 Score E Sequences producing significant alignments: (Bits) Value seq257780 156 8e-33 >seq257780 Length=1265 Score = 156 bits (172), Expect = 8e-33 Identities = 277/399 (69%), Gaps = 5/399 (1%) Strand=Plus/Plus Query 42633 CCCTGCATCAAGAAGAAGGCGGACTGGGCGCTCAACTGGATCGA-GAGTCCCGACGCAAC 42691 ||||| | || |||||||| |||||||| ||||| ||||| | || || | || | Sbjct 245 CCCTGTGTGAAAAAGAAGGCTGACTGGGCACTCAAGTGGATTGGTGACTCAAAATCCA-C 303 Query 42692 GTTCGGCGAGAGGCTGGTAGCCTTTACCGCCGTCGAGGGCATCTTCTTCTCGGGCGCCTT 42751 ||| ||| | |||||||||||| | ||||| ||||| | ||||| || || | || Sbjct 304 GTTTCCAGAGCGCCTGGTAGCCTTTGCAGCCGTAGAGGGGGTTTTCTTTTCTGGGTCGTT 363 Query 42752 CGCCTCCATCTTCTGGCTCAAGCAGAAGGTGTCGATGCCCGGACTCACCTTCTCGAACGA 42811 || |||||||||||||| ||| || | | ||||| || | || ||| || || Sbjct 364 TGCGTCCATCTTCTGGCTGAAGAAGCGTGGGCTTATGCCAGGGTTGACATTCAGCAATGA 423 Query 42812 ACTCATCAGCAGGGACGAGGGGCTGCATAGGGACTTTGCCTGCCTCCTGTTCTCGAGCCA 42871 ||| || ||| | || ||||| || || | ||||| || || || |||||| ||| || Sbjct 424 ACTAATAAGCCGTGATGAGGGACTTCACACTGACTTCGCTTGTCTTCTGTTC-CGA--CA 480 Query 42872 CCTCAGGCACAAGCCCTCGAAGGAGCGGGTCCGGGCCATCATCACGGAGGCCGTGGAGAT 42931 | |||| |||| ||||| |||||||| || || || || ||| || || || || Sbjct 481 CATCAGAAACAAACCCTCTAAGGAGCGCGTAGAAGCGATTATGCGGGAAGCTGTTGATAT 540 Query 42932 CGAGAAGGAGTTCCTCACGCAGTCGCTGCCCGTGTCCCTGGTCGGCATGAACCACGACCT 42991 ||| ||| || || || | | || || ||| | || ||||||||||| | || Sbjct 541 CGAAGTGGAATTTCTGACTGACGCTCTTCCTGTGGACTTGATCGGCATGAACTGCCGTCT 600 Query 42992 CATGTGCAAGTACATCCAGTACGTCGCCGACCATCTCCT 43030 ||| | ||||||||| || || ||||| | |||||| Sbjct 601 GATGGCCCAGTACATCCGTTATGTTGCCGATCGTCTCCT 639 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 938644881840960