Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Spirometra_20erinaceieuropaei_20[genbank_20GCA_5F000951995.1_202014-
09-26] 482,396 sequences; 1,258,717,181 total letters
Query= NC_013288.1
Length=191761
Score E
Sequences producing significant alignments: (Bits) Value
seq270649 89.7 6e-13
seq43131 89.7 6e-13
>seq270649
Length=1181
Score = 89.7 bits (98), Expect = 6e-13
Identities = 82/104 (79%), Gaps = 0/104 (0%)
Strand=Plus/Minus
Query 176819 TTCCCGCGGAGAGGGAACACACCGTAGTGATCACGACCAACCACAGAGAGACCAGCAACT 176878
|| || || || || || |||||||| | |||||||||||||| | ||| |||||
Sbjct 326 TTGCCTCGCAGTGGAAAAACACCGTAACGGTCACGACCAACCACGCTCAAACCCGCAACA 267
Query 176879 GCGAGGGTCTTCGCGGAATCACCCTCCGTCACGATGAGCGTACA 176922
|| |||||||| || ||||| |||||||| | ||||||||||||
Sbjct 266 GCCAGGGTCTTAGCTGAATCTCCCTCCGTAAGGATGAGCGTACA 223
>seq43131
Length=6507
Score = 89.7 bits (98), Expect = 6e-13
Identities = 82/104 (79%), Gaps = 0/104 (0%)
Strand=Plus/Minus
Query 176819 TTCCCGCGGAGAGGGAACACACCGTAGTGATCACGACCAACCACAGAGAGACCAGCAACT 176878
|| || || || || || |||||||| | |||||||||||||| | ||| |||||
Sbjct 4728 TTGCCTCGCAGTGGAAAAACACCGTAACGGTCACGACCAACCACGCTCAAACCCGCAACA 4669
Query 176879 GCGAGGGTCTTCGCGGAATCACCCTCCGTCACGATGAGCGTACA 176922
|| |||||||| || ||||| |||||||| | ||||||||||||
Sbjct 4668 GCCAGGGTCTTAGCTGAATCTCCCTCCGTAAGGATGAGCGTACA 4625
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 609807782259360
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |