Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Spirometra_20erinaceieuropaei_20[genbank_20GCA_5F000951995.1_202014-
09-26] 482,396 sequences; 1,258,717,181 total letters
Query= NC_013953.1
Length=156344
Score E
Sequences producing significant alignments: (Bits) Value
seq257780 149 6e-31
seq46948 116 4e-21
seq29733 111 2e-19
seq21692 107 2e-18
seq46123 102 8e-17
seq1202 98.7 1e-15
seq154141 89.7 5e-13
seq468507 86.0 6e-12
seq233574 86.0 6e-12
seq77159 82.4 8e-11
>seq257780
Length=1265
Score = 149 bits (164), Expect = 6e-31
Identities = 313/466 (67%), Gaps = 33/466 (7%)
Strand=Plus/Minus
Query 132895 CAAGCAAAGTCGCAATGCAAGCCCTCGTCCCTGGAAATGAGTTCGTTGCTGAAAGTCAAG 132954
||||| ||||| || | ||||| || | | || ||||| |||||||| |||||
Sbjct 465 CAAGCGAAGTCAGTGTGAAGTCCCTCATCACGGCTTATTAGTTCATTGCTGAATGTCAAC 406
Query 132955 CCGGGCATGAGGCCGCGTTTTTTGAGCCAAAATATGGCGGCGAAACTGCCC-GAAAAGAA 133013
|| ||||| || || || || || ||||| || |||| || |||| ||| ||||||||
Sbjct 405 CCTGGCATAAGCCCACGCTTCTTCAGCCAGAAGATGGACGC-AAACGACCCAGAAAAGAA 347
Query 133014 GACGCCCTCGACGGCCGCGAAAGCCACCAGGCGCTCGCCGAACGTGGCTTCTTTGCTGGC 133073
|| ||||| ||||| || || || ||||||||||| ||||||| || | | |
Sbjct 346 AACCCCCTCTACGGCTGCAAAGGCTACCAGGCGCTCTGGAAACGTGGATTTTGAGTCACC 287
Query 133074 GATCCAGCGCAGCGCCCATTCGGCCTTTTCTTTGACGCACGGCATCGTTTCGATGGCGTT 133133
||||| || ||||| || ||||| | ||| || || || | |||| | |||||
Sbjct 286 AATCCACTTGAGTGCCCAGTCAGCCTTCTTTTTCACACAGGGAAGGGTTTGTACTGCGTT 227
Query 133134 CAACAAA----CG---------------GAGTT--------TCTCTTCCGA--GGAACGC 133164
|| | | || ||||| | | | ||| ||| |
Sbjct 226 AAAGAGAAAGTCGCTAAAAATAAAATAAGAGTTAGAGGAAGTACCGTTCGATAGGATCCT 167
Query 133165 --ACGTAGGTGTCGATGAGGGTCGAATACATTTCCGAGTGTACGTTCTCCATGGCGATTT 133222
| ||| |||||||||||| |||||||| |||||||| | || || || || ||||
Sbjct 166 TGATGTACGTGTCGATGAGGAGAGAATACATCTCCGAGTGAATATTTTCGATTGCAATTT 107
Query 133223 GAAAGCCGTAAAAGCACCGCGCCTCGACCACCTGCACTTCTTGAGCGAAACGCTCGACCA 133282
| || || || ||||| || || || || || ||||||||| |||||| || || |
Sbjct 106 GGAATCCATAGAAGCAACGAGCTTCCGGGACTTGTACTTCTTGACTGAAACGTTCCACAA 47
Query 133283 GATTTTCGTTGACGATGCCGTCGCTGGCGGCGAAAAAGGCCAGCAC 133328
| || |||||||| || |||||||| ||||| ||||| || || ||
Sbjct 46 GGTTCTCGTTGACTATCCCGTCGCTTGCGGCAAAAAATGCAAGAAC 1
>seq46948
Length=6204
Score = 116 bits (128), Expect = 4e-21
Identities = 157/216 (73%), Gaps = 2/216 (1%)
Strand=Plus/Plus
Query 38244 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCCACC 38303
||||| || || ||||| || | |||||||| || || ||| | || |||||| ||| |
Sbjct 1071 ATGCAGATCTTTGTAAAGACCTTGACGGGCAAGACGATTACCCTGGAGGTCGAGCCCAGC 1130
Query 38304 GACAGCGTGCAAACGCTTAAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGCCG-ACCA 38362
||| | | | | |||| ||| |||| |||||||| || || ||||||| ||||
Sbjct 1131 GACTCTATTGAGAATGTGAAAGCAAAGATCCAGGACAAAGAAGGCAT-CCCGCCGGACCA 1189
Query 38363 ACAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAA 38422
|||| || | || | ||| |||||||| || || || | || || || ||| |||||
Sbjct 1190 ACAGAGGTTGATCTTCGCCGGCAAACAACTTGAGGATGGCCGTACTCTTTCCGATTACAA 1249
Query 38423 CATCCAAAAGGAAGCGACGCTGCATTTGGTGCTGCG 38458
||| |||||||| | || ||||||||||| ||||
Sbjct 1250 CATTCAAAAGGAGTCAACCCTGCATTTGGTCTTGCG 1285
Score = 114 bits (126), Expect = 1e-20
Identities = 160/219 (73%), Gaps = 8/219 (4%)
Strand=Plus/Plus
Query 38244 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCCACC 38303
||||| || || || || || | |||||||| || ||||| | || |||||| |||
Sbjct 1299 ATGCAGATCTTTGTGAAGACATTGACGGGCAAGACTATCACTCTGGAGGTCGAGCCCAGT 1358
Query 38304 GAC---AGCGTGCAAACGCTTAAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGCC-GA 38359
||| | || | |||| | || | || |||| ||||| |||||||| |||||| ||
Sbjct 1359 GACTCGATCGAG--AACG-TGAAGGCCAAGATCCAGGACAAGGAGGGAAT-CCCGCCAGA 1414
Query 38360 CCAACAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTA 38419
||| ||||| || || | || || || ||||| || |||| ||||||||| ||||||
Sbjct 1415 CCAGCAGCGACTGATCTTTGCCGGTAAGCAGCTCGAAGACGGTCGCACCCTCTCCGACTA 1474
Query 38420 CAACATCCAAAAGGAAGCGACGCTGCATTTGGTGCTGCG 38458
|||||| ||||||||| | || |||| |||| ||||
Sbjct 1475 CAACATTCAAAAGGAATCAACCTTGCACCTGGTCTTGCG 1513
Score = 114 bits (126), Expect = 1e-20
Identities = 155/216 (72%), Gaps = 0/216 (0%)
Strand=Plus/Plus
Query 38244 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCCACC 38303
|||||||| || || || || | ||||| ||||| || || | || |||||| | | |
Sbjct 1527 ATGCAAATCTTTGTGAAGACATTGACGGGTAAAACTATTACTCTGGAGGTCGAGCCTAGC 1586
Query 38304 GACAGCGTGCAAACGCTTAAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGCCGACCAA 38363
||| | | | | | |||| || |||| |||||||| || || || | ||||||
Sbjct 1587 GACTCCATTGAGAATGTGAAAGCGAAGATCCAGGACAAAGAAGGCATCCCACCGGACCAA 1646
Query 38364 CAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAAC 38423
||| || | || | ||| || || ||||| || |||| ||||| ||| ||||||||
Sbjct 1647 CAGAGGTTGATCTTCGCCGGTAAGCAGCTCGAGGACGGCCGCACGCTCTCAGACTACAAT 1706
Query 38424 ATCCAAAAGGAAGCGACGCTGCATTTGGTGCTGCGT 38459
|| |||||||| | || ||||| ||||||||||||
Sbjct 1707 ATTCAAAAGGAGTCTACACTGCACTTGGTGCTGCGT 1742
Score = 96.9 bits (106), Expect = 3e-15
Identities = 149/207 (72%), Gaps = 8/207 (4%)
Strand=Plus/Plus
Query 38244 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCCACC 38303
||||| || ||||| ||||| || || ||||| || || || | || || ||| |||
Sbjct 843 ATGCAGATCTTCGTTAAAACCCTTACCGGCAAGACTATTACTCTGGAGGTTGAGCCCAGT 902
Query 38304 GAC---AGCGTGCAAACGCTTAAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGCC-GA 38359
||| | || | || | | || | || |||| ||||| |||||||| |||||| ||
Sbjct 903 GACTCGATCGAG--AATG-TGAAGGCTAAGATCCAAGACAAGGAGGGAAT-CCCGCCAGA 958
Query 38360 CCAACAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTA 38419
||||||||| || || | || |||||||| || || || | |||||||| || ||
Sbjct 959 CCAACAGCGACTGATCTTTGCCGGCAAACAACTCGAAGATGGCCGCACCCTTTCTGATTA 1018
Query 38420 CAACATCCAAAAGGAAGCGACGCTGCA 38446
|||||| ||||||||| | || ||||
Sbjct 1019 CAACATTCAAAAGGAATCAACCTTGCA 1045
>seq29733
Length=7895
Score = 111 bits (122), Expect = 2e-19
Identities = 167/232 (72%), Gaps = 8/232 (3%)
Strand=Plus/Plus
Query 38244 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCCACC 38303
||||| || ||||| ||||| || || ||||| || || || | || || ||| |||
Sbjct 496 ATGCAGATCTTCGTTAAAACCCTTACCGGCAAGACTATTACTCTGGAGGTTGAGCCCAGT 555
Query 38304 GAC---AGCGTGCAAACGCTTAAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGCC-GA 38359
||| | || | || | | || | || |||| ||||| |||||||| |||||| ||
Sbjct 556 GACTCGATCGAG--AATG-TGAAGGCTAAGATCCAAGACAAGGAGGGAAT-CCCGCCAGA 611
Query 38360 CCAACAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTA 38419
||| |||||||| || | || ||||||||||| || || | |||||||| ||| ||
Sbjct 612 CCAGCAGCGGCTGATCTTTGCCGGCAAACAGCTCGAAGATGGCCGCACCCTTTCCGATTA 671
Query 38420 CAACATCCAAAAGGAAGCGACGCTGCATTTGGTGCTGCGTTTGAGAGGCGGC 38471
|||||| ||||||||| | || |||| |||| |||| | | ||||||
Sbjct 672 CAACATTCAAAAGGAATCAACCTTGCACCTGGTCTTGCGACTCCGCGGCGGC 723
>seq21692
Length=9146
Score = 107 bits (118), Expect = 2e-18
Identities = 155/216 (72%), Gaps = 2/216 (1%)
Strand=Plus/Plus
Query 38244 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCCACC 38303
||||| ||||| || ||||| || || || || || |||||| |||| || ||| | |
Sbjct 2702 ATGCAGATATTTGTCAAAACCCTAACCGGGAAGACTATCACCCTCGAAGTTGAGCCTTCG 2761
Query 38304 GACAGCGTGCAAACGCTTAAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGCC-GACCA 38362
||| | | | | || | || || | || || ||||| || |||||| |||||
Sbjct 2762 GACTCAATTGAGAATGTGAAGGCCAAGATTCAGGATAAGGAGGGTAT-CCCGCCAGACCA 2820
Query 38363 ACAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAA 38422
|||||| | || | ||| ||||||||||| || |||| |||||| ||| || || ||
Sbjct 2821 ACAGCGATTAATCTTCGCTGGCAAACAGCTCGAGGACGGGCGCACTCTCTCGGATTATAA 2880
Query 38423 CATCCAAAAGGAAGCGACGCTGCATTTGGTGCTGCG 38458
||||||||||| |||| ||||| |||| |||||
Sbjct 2881 TATCCAAAAGGAGTCGACTCTGCACCTGGTCCTGCG 2916
>seq46123
Length=6266
Score = 102 bits (112), Expect = 8e-17
Identities = 165/232 (71%), Gaps = 8/232 (3%)
Strand=Plus/Plus
Query 38244 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCCACC 38303
||||| || ||||| ||||| || || ||||| || || || | || || ||| |||
Sbjct 1177 ATGCAGATCTTCGTTAAAACCCTTACCGGCAAGACTATTACTCTGGAGGTTGAGCCCAGT 1236
Query 38304 GAC---AGCGTGCAAACGCTTAAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGCC-GA 38359
||| | || | || | | || | || |||| ||||| |||||||| |||||| ||
Sbjct 1237 GACTCGATCGAG--AATG-TGAAGGCCAAGATCCAAGACAAGGAGGGAAT-CCCGCCAGA 1292
Query 38360 CCAACAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTA 38419
||| ||||| || || | || ||||||||||| || || | |||||||| ||| ||
Sbjct 1293 CCAGCAGCGACTGATCTTTGCCGGCAAACAGCTCGAAGATGGCCGCACCCTTTCCGATTA 1352
Query 38420 CAACATCCAAAAGGAAGCGACGCTGCATTTGGTGCTGCGTTTGAGAGGCGGC 38471
|||||| ||||| ||| | || |||| |||| |||| | | ||||||
Sbjct 1353 CAACATTCAAAAAGAATCAACCTTGCACCTGGTCTTGCGACTCCGCGGCGGC 1404
>seq1202
Length=22811
Score = 98.7 bits (108), Expect = 1e-15
Identities = 153/216 (71%), Gaps = 2/216 (1%)
Strand=Plus/Plus
Query 38244 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCCACC 38303
||||| ||||| || ||||| || || || || || |||||| |||| | ||| | |
Sbjct 3602 ATGCAGATATTTGTCAAAACCCTAACCGGGAAGACTATCACCCTCGAAATTGAGCCTTCG 3661
Query 38304 GACAGCGTGCAAACGCTTAAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGCC-GACCA 38362
||| | | | | || | || || | || || ||||| || |||||| |||||
Sbjct 3662 GACTCAATTGAGAATGTGAAGGCCAAGATTCAGGATAAGGAGGGTAT-CCCGCCAGACCA 3720
Query 38363 ACAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAA 38422
|||||| || || | ||| |||||||| || || |||| ||||| ||| || || ||
Sbjct 3721 ACAGCGACTAATCTTCGCTGGCAAACAACTCGAGGACGGACGCACTCTCTCGGATTATAA 3780
Query 38423 CATCCAAAAGGAAGCGACGCTGCATTTGGTGCTGCG 38458
||||||||||| |||| ||||| |||| |||||
Sbjct 3781 TATCCAAAAGGAGTCGACTCTGCACCTGGTCCTGCG 3816
>seq154141
Length=2423
Score = 89.7 bits (98), Expect = 5e-13
Identities = 160/230 (70%), Gaps = 4/230 (2%)
Strand=Plus/Plus
Query 38244 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCCACC 38303
||||| || ||||| || ||||| || ||||| ||||| || | || || ||| | | |
Sbjct 79 ATGCAGATCTTCGTGAAGACGCTGACTGGCAAGACCATAACGCTAGAGGTGGAGCCGAGC 138
Query 38304 GACA-GCGTGCAAACGCTTAAAGAAAAA-ATCCTCGACAAAGAGGGAATTCCCGCCGACC 38361
||| | || || | | |||| || |||| ||||| || || || || | ||||
Sbjct 139 GACTCGATTGAGAATG--TGAAGACGAAGATCCAGGACAAGGAAGGCATCCCTCCAGACC 196
Query 38362 AACAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACA 38421
| || || || || | || || || ||| |||| |||| || || || |||||||
Sbjct 197 AGCAACGTCTGATCTTTGCTGGTAAGCAGTTGGAAGACGGTCGTACGCTGTCAGACTACA 256
Query 38422 ACATCCAAAAGGAAGCGACGCTGCATTTGGTGCTGCGTTTGAGAGGCGGC 38471
||||||| ||||| | || |||||| |||| || ||| || | || |||
Sbjct 257 ACATCCAGAAGGAGTCAACACTGCATCTGGTTCTCCGTCTGCGTGGTGGC 306
>seq468507
Length=525
Score = 86.0 bits (94), Expect = 6e-12
Identities = 91/120 (76%), Gaps = 0/120 (0%)
Strand=Plus/Minus
Query 38343 GAGGGAATTCCCGCCGACCAACAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAG 38402
|| || ||||| | || || ||||| || |||| ||| ||||| ||| |||| |||||
Sbjct 353 GAAGGCATTCCGCCGGAGCAGCAGCGTCTGATTTTCGCTGGCAAGCAGTTGGAGGACGAT 294
Query 38403 CGCACCCTCAACGACTACAACATCCAAAAGGAAGCGACGCTGCATTTGGTGCTGCGTTTG 38462
|||| || ||||||| ||||||||||| | ||||||||||||||| |||| ||
Sbjct 293 TGCACGCTGTTAGACTACAGGATCCAAAAGGATTCAACGCTGCATTTGGTGGGGCGTCTG 234
>seq233574
Length=1449
Score = 86.0 bits (94), Expect = 6e-12
Identities = 158/229 (69%), Gaps = 2/229 (1%)
Strand=Plus/Plus
Query 38244 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCCACC 38303
||||| || ||||| || ||||| || ||||| ||||| || | || || ||| | |
Sbjct 79 ATGCAGATCTTCGTGAAGACGCTGACTGGCAAGACCATAACGCTAGAGGTGGAGCCGAGT 138
Query 38304 GACA-GCGTGCAAACGCTTAAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGCCGACCA 38362
||| | || || | | || | || || | ||||| || || || ||| | |||||
Sbjct 139 GACTCGATTGAGAATG-TGAAGGCGAAGATTCAGGACAAGGAAGGCATCCCCCCAGACCA 197
Query 38363 ACAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAA 38422
|| || || || | || || || ||| |||| |||| || || || ||||||||
Sbjct 198 GCAACGTCTGATCTTTGCTGGTAAGCAGTTGGAAGACGGTCGTACGCTGTCAGACTACAA 257
Query 38423 CATCCAAAAGGAAGCGACGCTGCATTTGGTGCTGCGTTTGAGAGGCGGC 38471
|||||| ||||| | |||||||| |||| || ||| || | || |||
Sbjct 258 CATCCAGAAGGAGTCAACGCTGCACCTGGTTCTTCGTCTGCGTGGTGGC 306
>seq77159
Length=4494
Score = 82.4 bits (90), Expect = 8e-11
Identities = 90/120 (75%), Gaps = 0/120 (0%)
Strand=Plus/Plus
Query 38343 GAGGGAATTCCCGCCGACCAACAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAG 38402
|| || ||||| | || || ||||| || |||| ||| ||||| ||| |||| |||||
Sbjct 385 GAAGGCATTCCGCCGGAGCAGCAGCGTCTGATTTTCGCTGGCAAGCAGTTGGAGGACGAT 444
Query 38403 CGCACCCTCAACGACTACAACATCCAAAAGGAAGCGACGCTGCATTTGGTGCTGCGTTTG 38462
|||| || ||||||| ||||||||||| | | ||||||||||||| |||| ||
Sbjct 445 AGCACGCTGTTAGACTACAGGATCCAAAAGGATTCAATGCTGCATTTGGTGGGGCGTCTG 504
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 497156783024640
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