Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Spirometra_20erinaceieuropaei_20[genbank_20GCA_5F000951995.1_202014-
09-26] 482,396 sequences; 1,258,717,181 total letters
Query= NC_014637.1
Length=617453
Score E
Sequences producing significant alignments: (Bits) Value
seq466127 123 1e-22
seq155539 113 2e-19
seq353987 96.9 1e-14
seq81195 96.9 1e-14
seq46948 87.8 7e-12
seq21692 84.2 9e-11
seq1202 84.2 9e-11
>seq466127
Length=530
Score = 123 bits (136), Expect = 1e-22
Identities = 152/208 (73%), Gaps = 0/208 (0%)
Strand=Plus/Plus
Query 451245 CTGAAGAAATTTCATCTATGGTTCTTACTAAAATGAAAGAAACAGCAGAACAATATATTG 451304
|||||||||| || || ||||| || ||||||||| ||||| || || || | |
Sbjct 206 CTGAAGAAATCTCCTCAATGGTGCTGGTTAAAATGAAGGAAACTGCCGAGGCCTACCTAG 265
Query 451305 GTTCTCCAGTTACTGATGCAGTAATTACTGTTCCCGCTTATTTCAATGATGCACAACGGC 451364
| | || ||||| || || | |||||||| || |||||||| ||| ||||| |
Sbjct 266 GCAAGACGGTCACTGACGCTGTCGTCACTGTTCCTGCCTATTTCAACGATAGTCAACGTC 325
Query 451365 AAGCAACTAAAGATGCAGGACATATTGCTGGTTTAAATGTTCTTCGAATTATTAATGAAC 451424
|||| || |||||||||||| || | || | |||||||| || |||||||||||||
Sbjct 326 AAGCCACGAAAGATGCAGGAACCATCTCGGGCCTCAATGTTCTGCGCATTATTAATGAAC 385
Query 451425 CTACAGCAGCTGCTCTAGCATATGGACT 451452
| || || ||||| |||| || |||||
Sbjct 386 CGACGGCCGCTGCGATAGCTTACGGACT 413
>seq155539
Length=2399
Score = 113 bits (124), Expect = 2e-19
Identities = 247/369 (67%), Gaps = 6/369 (2%)
Strand=Plus/Plus
Query 451238 TTTGCTCCTGAAGAAATTTCATCTATGGTTCTTACTAAAATGAAAGAAACAGCAGAACAA 451297
||||| ||||| ||||| || | ||||| ||| | ||||| | | || ||
Sbjct 523 TTTGCCCCTGAGGAAATATCTGCAATGGTCCTTGGACACATGAAGCAGATCGCTGAGGCT 582
Query 451298 TATATTGGTTCTCCAGTTACTGATGCAGTAATTACTGTTCCCGCTTATTTCAATGATGCA 451357
||| | || | ||| ||| |||| || | ||||| || || || ||||| |||||
Sbjct 583 TATTTGGGGACCAAAGTCACTCATGCTGTTGTAACTGTGCCAGCCTACTTCAACGATGCT 642
Query 451358 CAACGGCAAGCAACTAAAGATGCAGGACATATTGCTGGTTTAAATGTTCTTCGAATTATT 451417
|||||||| | || || || || || |||||| || ||||||| | || || ||
Sbjct 643 CAACGGCAGTCGACGAAGGACGCTGGTGTTATTGCAGGCCTAAATGTGTTGCGGATAATC 702
Query 451418 AATGAACCTACAGCAGCTGCTCTAGCATATGGACTAGGAAAATCAAAAGAAACAGAAGaa 451477
|| |||||||| || || || | || || || | ||| || | || |||||||
Sbjct 703 AACGAACCTACTGCGGCGGCAATTGCTTACGGGTT-GGACAAGAAGGAGGGCGAGAAGAA 761
Query 451478 aaaaaTATTTTAGTATTTGATTTTGGTGGAGGAACTCATGATACTTCTGTACTTTCAATT 451537
||| | || || ||| |||| || || ||| |||| |||| | | | ||
Sbjct 762 -----TATCCTTGTGTTCGATCTTGGCGGCGGCACTTTTGATGTTTCTCTGATGACCATC 816
Query 451538 GAAGATGGGGTATTTGAAGTAAAGGCAACCAATGGTGATACTCATCTAGGAGGTGAAGAT 451597
|| | || || || ||||| || |||| ||||||||| ||||| ||||||||||||
Sbjct 817 GATAACGGAGTTTTCGAAGTTCTTGCTACCAGTGGTGATACGCATCTCGGAGGTGAAGAT 876
Query 451598 ATTGATAAT 451606
||||| ||
Sbjct 877 TTTGATCAT 885
>seq353987
Length=793
Score = 96.9 bits (106), Expect = 1e-14
Identities = 151/216 (70%), Gaps = 0/216 (0%)
Strand=Plus/Plus
Query 451244 CCTGAAGAAATTTCATCTATGGTTCTTACTAAAATGAAAGAAACAGCAGAACAATATATT 451303
||||| |||||||| | || | || | || |||| ||| | |||| | || |||
Sbjct 408 CCTGAGGAAATTTCCGCACTGTTGCTCATGAAGATGAGAGAGATTTCAGAGCTGTACATT 467
Query 451304 GGTTCTCCAGTTACTGATGCAGTAATTACTGTTCCCGCTTATTTCAATGATGCACAACGG 451363
|| |||||||| || || || || || || ||||| | ||||| || ||||||
Sbjct 468 GGAGAACCAGTTACCGAGGCTGTCATCACCGTGCCCGCGTGCTTCAACGACAGACAACGT 527
Query 451364 CAAGCAACTAAAGATGCAGGACATATTGCTGGTTTAAATGTTCTTCGAATTATTAATGAA 451423
|| ||||| || ||||| | | ||| || ||||| || ||||| || | |||||||||
Sbjct 528 CAGGCAACCAAGGATGCCGCAACTATGGCCGGTTTGAAGGTTCTGCGGCTCATTAATGAA 587
Query 451424 CCTACAGCAGCTGCTCTAGCATATGGACTAGGAAAA 451459
|| ||||| || |||| || ||||| | ||||
Sbjct 588 CCCACAGCCCTCGCGATAGCCTACGGACTTGAAAAA 623
>seq81195
Length=4333
Score = 96.9 bits (106), Expect = 1e-14
Identities = 151/216 (70%), Gaps = 0/216 (0%)
Strand=Plus/Plus
Query 451244 CCTGAAGAAATTTCATCTATGGTTCTTACTAAAATGAAAGAAACAGCAGAACAATATATT 451303
||||| |||||||| | || | || | || |||| ||| | |||| | || |||
Sbjct 3948 CCTGAGGAAATTTCCGCACTGTTGCTCATGAAGATGAGAGAGATTTCAGAGCTGTACATT 4007
Query 451304 GGTTCTCCAGTTACTGATGCAGTAATTACTGTTCCCGCTTATTTCAATGATGCACAACGG 451363
|| |||||||| || || || || || || ||||| | ||||| || ||||||
Sbjct 4008 GGAGAACCAGTTACCGAGGCTGTCATCACCGTGCCCGCGTGCTTCAACGACAGACAACGT 4067
Query 451364 CAAGCAACTAAAGATGCAGGACATATTGCTGGTTTAAATGTTCTTCGAATTATTAATGAA 451423
|| ||||| || ||||| | | ||| || ||||| || ||||| || | |||||||||
Sbjct 4068 CAGGCAACCAAGGATGCCGCAACTATGGCCGGTTTGAAGGTTCTGCGGCTCATTAATGAA 4127
Query 451424 CCTACAGCAGCTGCTCTAGCATATGGACTAGGAAAA 451459
|| ||||| || |||| || ||||| | ||||
Sbjct 4128 CCCACAGCCCTCGCGATAGCTTACGGACTTGAAAAA 4163
>seq46948
Length=6204
Score = 87.8 bits (96), Expect = 7e-12
Identities = 150/218 (69%), Gaps = 0/218 (0%)
Strand=Plus/Plus
Query 391050 ATGAATATTTTCGTTAAAACACTGACTGGTAAAACTATTACTCTTGATGTTGAATCATCT 391109
||| | || ||||||||||| || || || || ||||||||||| || ||||| | |
Sbjct 843 ATGCAGATCTTCGTTAAAACCCTTACCGGCAAGACTATTACTCTGGAGGTTGAGCCCAGT 902
Query 391110 GATAACATTGAAGCTATTAAACAAAAAATTCAAGATAAGGAAGGAATTCCTCCTGATCAA 391169
|| || || | | || || || ||||| ||||| ||||| || || || |||
Sbjct 903 GACTCGATCGAGAATGTGAAGGCTAAGATCCAAGACAAGGAGGGAATCCCGCCAGACCAA 962
Query 391170 CAACGTTTAATTTTCTCAGGGAAACAACTTGAAGATGGAAGAACTTTGGCGGATTATAAT 391229
|| || | || || | || |||||||| |||||||| | || | | ||||| ||
Sbjct 963 CAGCGACTGATCTTTGCCGGCAAACAACTCGAAGATGGCCGCACCCTTTCTGATTACAAC 1022
Query 391230 ATTGATAAGGATGCAACACTTCACTTAGTATTAAGACT 391267
||| | ||||| |||| | ||| |||| || ||||
Sbjct 1023 ATTCAAAAGGAATCAACCTTGCACCTAGTCTTGCGACT 1060
>seq21692
Length=9146
Score = 84.2 bits (92), Expect = 9e-11
Identities = 141/204 (69%), Gaps = 0/204 (0%)
Strand=Plus/Plus
Query 391050 ATGAATATTTTCGTTAAAACACTGACTGGTAAAACTATTACTCTTGATGTTGAATCATCT 391109
||| | || || || ||||| || || || || ||||| || || || ||||| | ||
Sbjct 2702 ATGCAGATATTTGTCAAAACCCTAACCGGGAAGACTATCACCCTCGAAGTTGAGCCTTCG 2761
Query 391110 GATAACATTGAAGCTATTAAACAAAAAATTCAAGATAAGGAAGGAATTCCTCCTGATCAA 391169
|| ||||| | | || || ||||| |||||||| || || || || || |||
Sbjct 2762 GACTCAATTGAGAATGTGAAGGCCAAGATTCAGGATAAGGAGGGTATCCCGCCAGACCAA 2821
Query 391170 CAACGTTTAATTTTCTCAGGGAAACAACTTGAAGATGGAAGAACTTTGGCGGATTATAAT 391229
|| || ||||| ||| | || ||||| || || || || | ||| | |||||||||||
Sbjct 2822 CAGCGATTAATCTTCGCTGGCAAACAGCTCGAGGACGGGCGCACTCTCTCGGATTATAAT 2881
Query 391230 ATTGATAAGGATGCAACACTTCAC 391253
|| | ||||| | || || |||
Sbjct 2882 ATCCAAAAGGAGTCGACTCTGCAC 2905
>seq1202
Length=22811
Score = 84.2 bits (92), Expect = 9e-11
Identities = 141/204 (69%), Gaps = 0/204 (0%)
Strand=Plus/Plus
Query 391050 ATGAATATTTTCGTTAAAACACTGACTGGTAAAACTATTACTCTTGATGTTGAATCATCT 391109
||| | || || || ||||| || || || || ||||| || || || |||| | ||
Sbjct 3602 ATGCAGATATTTGTCAAAACCCTAACCGGGAAGACTATCACCCTCGAAATTGAGCCTTCG 3661
Query 391110 GATAACATTGAAGCTATTAAACAAAAAATTCAAGATAAGGAAGGAATTCCTCCTGATCAA 391169
|| ||||| | | || || ||||| |||||||| || || || || || |||
Sbjct 3662 GACTCAATTGAGAATGTGAAGGCCAAGATTCAGGATAAGGAGGGTATCCCGCCAGACCAA 3721
Query 391170 CAACGTTTAATTTTCTCAGGGAAACAACTTGAAGATGGAAGAACTTTGGCGGATTATAAT 391229
|| || |||| ||| | || |||||||| || || ||| | ||| | |||||||||||
Sbjct 3722 CAGCGACTAATCTTCGCTGGCAAACAACTCGAGGACGGACGCACTCTCTCGGATTATAAT 3781
Query 391230 ATTGATAAGGATGCAACACTTCAC 391253
|| | ||||| | || || |||
Sbjct 3782 ATCCAAAAGGAGTCGACTCTGCAC 3805
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1963507079754768
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |