Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Spirometra_20erinaceieuropaei_20[genbank_20GCA_5F000951995.1_202014-
09-26] 482,396 sequences; 1,258,717,181 total letters
Query= NC_014765.1
Length=198519
Score E
Sequences producing significant alignments: (Bits) Value
seq338374 230 3e-55
seq338286 226 4e-54
seq466127 188 9e-43
seq155539 131 2e-25
seq270649 87.8 2e-12
seq43131 87.8 2e-12
>seq338374
Length=848
Score = 230 bits (254), Expect = 3e-55
Identities = 450/665 (68%), Gaps = 0/665 (0%)
Strand=Plus/Minus
Query 6896 GGAATCGTCGTATTTCTCGGAATAACCGGGGTCATAATACCACCCATAGTTTCGAGTCCA 6955
||||| || || |||| | ||| | | |||||| | ||| || ||| || | ||
Sbjct 665 GGAATGGTAGTGTTTCGCTTAATGAGGGCGGTCATTACACCGCCAGCAGTCTCCAAACCT 606
Query 6956 AGAGACAGAGGTGTCACGTCCAAGAGTAACAGGTCTTGAACAGATTCGTTCCCTTCACCC 7015
| |||| || | || |||| |||| |||||| ||||||| || | |||||
Sbjct 605 AACGACAAGGGGGCGACATCCAGAAGTAGCAGGTCCTGAACAGCCTCTGACTTATCACCG 546
Query 7016 GTTAAGATGGCGGCTTGGACCGTCGCCCCGTATGCGACCGCCTCATCGGGGTTAATCGTT 7075
| | ||||| ||||| |||| || || || ||||| ||||| || || || || | |
Sbjct 545 CTCAGAATGGCAGCTTGAACCGCAGCGCCATAAGCGACAGCCTCGTCCGGATTTATAGAT 486
Query 7076 TTATTCAGTTCTTTACCGTTAAAATAATCCGATAACATTTGTTGAATTTTCGGGATTCGT 7135
|| ||||||||||||||||| || | || | || || || | || || || ||
Sbjct 485 TTGTTCAGTTCTTTACCGTTGAAGAAGTCTTGCAGCAGTTTCTGCACCTTAGGAATACGC 426
Query 7136 GTCGATCCACCGACCAAAACGATTTCATTCACTTTCGATTTATCGATCTTTGAGTCTCGA 7195
|| || || || |||| || | || | || ||||| || | ||| | || |||
Sbjct 425 GTAGAGCCGCCTACCAGCACTACATCGTGGACCGAGGATTTGTCCAGCTTGGCATCCCGA 366
Query 7196 AGTGTTTTTTCGACAGGTTCCATACATTTACGGAACAAGTCCATACACAGTTCCTCAAAA 7255
|| | ||| || || || |||| | || || | |||| |||||||||||| ||
Sbjct 365 AGGGCTTTCTCCACGGGATCCAATGTGCTGCGAAAGAGGTCCGCACACAGTTCCTCGAAG 306
Query 7256 CGTGCACGGGTAATGGATGTATAGAAATCAACGCCGTCGTATAACGAATCAATTTCAATG 7315
|| || || || ||||| || || || || | ||||| | ||| || ||||| | |
Sbjct 305 CGGGCTCGTGTTATGGAGGTGTAAAAGTCGATACCGTCCATCAGCGAGTCTATTTCGACG 246
Query 7316 GTTGTTTGTGCCGTCGAAGATAACGTTCGCTTTGCGCGCTCACACGCCGTTCGTAAACGA 7375
| | ||| || | ||| | ||| ||||| || | |||||| || ||||| | ||||
Sbjct 245 TTAGCTTGAGCGCTGGAACTGAGCGTGCGCTTGGCCCTCTCACAGGCAGTTCGGAGACGA 186
Query 7376 CGAAGGGCACGCGGGTTACCGGAAATATCTTTCTTATGTTTACGTTTAAACTCTTCAGAG 7435
|| | |||||| || | || ||||||||| ||||| || || ||||||| | |
Sbjct 185 CGGATAGCACGCTTATTTGTGTTAAGATCTTTCTTGTGTTTGCGCTTGAACTCTTGGGCG 126
Query 7436 AAGTGTCGAAGGAGTCTCGAATCGAAATCTTCACCACCCAAGTGTGTATCCCCCGCGGTC 7495
||||| | || |||| || ||||| || ||||| ||||| || || ||||| |||||
Sbjct 125 AAGTGACTAACTAGTCGAGAGTCGAAGTCCTCACCTCCCAAATGGGTGTCCCCGGCGGTA 66
Query 7496 GCTTTGACTTCAAAGATACCTCCTTCAATGTTTAACAACGAAACATCAAACGTACCACCA 7555
| || ||||||||||| || |||| ||| | | || |||||||| ||||| ||
Sbjct 65 GACTTTACTTCAAAGATGCCGTCTTCGATGGAGAGAATGGACACATCAAAAGTACCTCCG 6
Query 7556 CCCAG 7560
|| ||
Sbjct 5 CCAAG 1
>seq338286
Length=848
Score = 226 bits (250), Expect = 4e-54
Identities = 449/665 (68%), Gaps = 0/665 (0%)
Strand=Plus/Plus
Query 6896 GGAATCGTCGTATTTCTCGGAATAACCGGGGTCATAATACCACCCATAGTTTCGAGTCCA 6955
||||| || || |||| | ||| | | |||||| | |||||| ||| || | ||
Sbjct 184 GGAATGGTAGTGTTTCGCTTAATGAGGGCGGTCATTACACCACCAGCAGTCTCCAAACCT 243
Query 6956 AGAGACAGAGGTGTCACGTCCAAGAGTAACAGGTCTTGAACAGATTCGTTCCCTTCACCC 7015
| |||| || | || |||| |||| |||||| ||||||| || | |||||
Sbjct 244 AACGACAAGGGGGCGACATCCAGAAGTAGCAGGTCCTGAACAGCCTCTGACTTATCACCG 303
Query 7016 GTTAAGATGGCGGCTTGGACCGTCGCCCCGTATGCGACCGCCTCATCGGGGTTAATCGTT 7075
| | ||||| ||||| |||| || || || ||||| ||||| || || || || | |
Sbjct 304 CTCAGAATGGCAGCTTGAACCGCAGCGCCATAAGCGACAGCCTCGTCCGGATTTATAGAT 363
Query 7076 TTATTCAGTTCTTTACCGTTAAAATAATCCGATAACATTTGTTGAATTTTCGGGATTCGT 7135
|| ||||||||||||||||| || | || | || || || | || || || ||
Sbjct 364 TTGTTCAGTTCTTTACCGTTGAAGAAGTCTTGCAGCAGTTTCTGCACCTTAGGAATACGC 423
Query 7136 GTCGATCCACCGACCAAAACGATTTCATTCACTTTCGATTTATCGATCTTTGAGTCTCGA 7195
|| || || || |||| || | || | || ||||| || | ||| | || |||
Sbjct 424 GTAGAGCCGCCTACCAGCACTACATCGTGGACCGAGGATTTGTCCAGCTTGGCATCCCGA 483
Query 7196 AGTGTTTTTTCGACAGGTTCCATACATTTACGGAACAAGTCCATACACAGTTCCTCAAAA 7255
|| | ||| || || || |||| | || || | |||| |||||||||||| ||
Sbjct 484 AGGGCTTTCTCCACGGGATCCAATGTGCTGCGAAAGAGGTCCGCACACAGTTCCTCGAAG 543
Query 7256 CGTGCACGGGTAATGGATGTATAGAAATCAACGCCGTCGTATAACGAATCAATTTCAATG 7315
|| || || || ||||| || || || || | ||||| | ||| || ||||| | |
Sbjct 544 CGGGCTCGTGTTATGGAGGTGTAAAAGTCGATACCGTCCATCAGCGAGTCTATTTCGACG 603
Query 7316 GTTGTTTGTGCCGTCGAAGATAACGTTCGCTTTGCGCGCTCACACGCCGTTCGTAAACGA 7375
| | ||| || | ||| | || ||||| || | |||||| || ||||| | ||||
Sbjct 604 TTAGCTTGAGCACTGGAACTGAGTGTGCGCTTAGCCCTCTCACAGGCAGTTCGGAGACGA 663
Query 7376 CGAAGGGCACGCGGGTTACCGGAAATATCTTTCTTATGTTTACGTTTAAACTCTTCAGAG 7435
|| | |||||| || | || ||||||||| ||||| || |||||||||| |
Sbjct 664 CGGATAGCACGCTTATTTGTGTTAAGATCTTTCTTGTGTTTGCGCTTAAACTCTTGGGCA 723
Query 7436 AAGTGTCGAAGGAGTCTCGAATCGAAATCTTCACCACCCAAGTGTGTATCCCCCGCGGTC 7495
||||| | || |||| || ||||| || ||||| ||||| || || || || |||||
Sbjct 724 AAGTGACTAACCAGTCGAGAGTCGAAGTCCTCACCTCCCAAATGGGTGTCTCCGGCGGTA 783
Query 7496 GCTTTGACTTCAAAGATACCTCCTTCAATGTTTAACAACGAAACATCAAACGTACCACCA 7555
| || ||||||||||| || |||| ||| | | || |||||||| ||||| ||
Sbjct 784 GACTTTACTTCAAAGATGCCGTCTTCGATGGAGAGAATGGACACATCAAAAGTACCTCCG 843
Query 7556 CCCAG 7560
|| ||
Sbjct 844 CCAAG 848
>seq466127
Length=530
Score = 188 bits (208), Expect = 9e-43
Identities = 364/534 (68%), Gaps = 5/534 (1%)
Strand=Plus/Minus
Query 7487 CCCGCGGTCGCTTTGACTTCAAAGATACCTCCTTCAATGTTTAACAACGAAACATCAAAC 7546
|| ||||| | || ||||||||||| || |||| ||| | | || ||||||||
Sbjct 530 CCGGCGGTAGACTTTACTTCAAAGATGCCGTCTTCGATGGAGAGAATGGACACATCAAAA 471
Query 7547 GTACCACCACCCAGGTCAAAAATGAGTACGTT-CGTATCGTCGTCTTTGTTCTTATCGAG 7605
||||| || || || || || ||||| || || ||| || | | ||||| |||||
Sbjct 470 GTACCTCCGCCAAGATCGAAGATGAGCACATTGCGT-TCAGAGCCGACCTTCTTGTCGAG 412
Query 7606 ACCGTACGCGATAGCCGCCGCCGTTGGTTCATTAATAATACGAAGACAGTTCAGGCCAGC 7665
||||| || || || || ||||| |||||||||||||| || ||| || ||||| |
Sbjct 411 TCCGTAAGCTATCGCAGCGGCCGTCGGTTCATTAATAATGCGCAGAACATTGAGGCCCGA 352
Query 7666 AATAGTTGCCGCATCTTTCGTCGCTTGTCGTTGCGAATCGTTAAAGTAGGCCGGGACCGT 7725
|| ||| | ||||||||||| ||||| ||||| |||||| || ||||| || || ||
Sbjct 351 GATGGTTCCTGCATCTTTCGTGGCTTGACGTTGACTATCGTTGAAATAGGCAGGAACAGT 292
Query 7726 TACGACCGCGTCCGTGACTTTCTTACCGAGATACGATTCCGCGATATCTTTCATTTTGGT 7785
||||| ||||| ||||| |||| || || || | || || | || ||||||||
Sbjct 291 GACGACAGCGTCAGTGACCGTCTTGCCTAGGTAGGCCTCGGCAGTTTCCTTCATTTTAAC 232
Query 7786 AAGAACCATCGATGAAATCTCTTCAGCCGCAAACTGTTTCGTTTCACCGTTAAAATCAAC 7845
|| ||||| || || || |||||||| || ||||| | || || | || ||
Sbjct 231 CAGCACCATTGAGGAGATTTCTTCAGCATTGAATTGTTTTTTCTCTCCCCGGTACTCGAC 172
Query 7846 TTCAATCATGGGTTTATCCGCAGCACCGGGGATAACCTTATACGACCAATCTTTCATATC 7905
||| ||| | ||||| | ||| | ||||| | || | | ||| | ||| |||
Sbjct 171 TTCGATCTTTGGTTTGCCACCAGAA---TTGATAATCGTAAATGGCCAGTGCTTCGCATC 115
Query 7906 GTCTTGGACCTGTTGGTCCGAAAACTTTCTTCCGATAAGACGCTTTGCATCAAAAACTGT 7965
|||||| |||| || || || || || ||||| |||||||| || ||
Sbjct 114 ACTTTGGACAGCGGGGTCGTCGAAGCGTCGGCCAATTAGGCGCTTGGCATCAAAGACAGT 55
Query 7966 GTTTTTGGGGTTCATGGCTGTTTGGTTCTTCGCCGCGTCCCCGATAAGACGTTC 8019
|| |||||||| || |||||| | || || ||||| || || |||||
Sbjct 54 ATTCGACGGGTTCATAGCCACCTGGTTCCTAGCGGCATCCCCAATGAGGCGTTC 1
>seq155539
Length=2399
Score = 131 bits (144), Expect = 2e-25
Identities = 250/365 (68%), Gaps = 5/365 (1%)
Strand=Plus/Minus
Query 7456 ATCGAAATCTTCACCACCCAAGTGTGTATCCCCCGCGGTCGCTTTGACTTCAAAGATACC 7515
||| ||||||||||| || | || ||||| || ||| || ||||| || | ||
Sbjct 882 ATCAAAATCTTCACCTCCGAGATGCGTATCACCACTGGTAGCAAGAACTTCGAAAACTCC 823
Query 7516 TCCTTCAATGTTTAACAACGAAACATCAAACGTACCACCACCCAGGTCAAAAATGAGTAC 7575
|| ||| | | || ||||||||||| || || || || || || || | || |
Sbjct 822 GTTATCGATGGTCATCAGAGAAACATCAAAAGTGCCGCCGCCAAGATCGAACACAAGGAT 763
Query 7576 GTTCGTATCGTCGTCTTTGTTCTTATCGAGACCGTACGCGATAGCCGCCGCCGTTGGTTC 7635
||| | ||| | || ||||| || | ||||| || || |||||||| || |||||
Sbjct 762 ATTCTTCTCGCCCTC---CTTCTTGTCCAACCCGTAAGCAATTGCCGCCGCAGTAGGTTC 706
Query 7636 ATTAATAATACG-AAGACAGTTCAGGCCAGCAATAGTTGCCGCATCTTTCGTCGCTTGTC 7694
|| || || || || ||| || ||||| |||||| | || || ||||||| || |
Sbjct 705 GTTGATTATCCGCAACACA-TTTAGGCCTGCAATAACACCAGCGTCCTTCGTCGACTGCC 647
Query 7695 GTTGCGAATCGTTAAAGTAGGCCGGGACCGTTACGACCGCGTCCGTGACTTTCTTACCGA 7754
|||| | |||||| |||||||| || || ||||| || || | |||||||| | || |
Sbjct 646 GTTGAGCATCGTTGAAGTAGGCTGGCACAGTTACAACAGCATGAGTGACTTTGGTCCCCA 587
Query 7755 GATACGATTCCGCGATATCTTTCATTTTGGTAAGAACCATCGATGAAATCTCTTCAGCCG 7814
||| | || ||||| | ||||| | ||| ||||| | || || || |||| |
Sbjct 586 AATAAGCCTCAGCGATCTGCTTCATGTGTCCAAGGACCATTGCAGATATTTCCTCAGGGG 527
Query 7815 CAAAC 7819
|||||
Sbjct 526 CAAAC 522
>seq270649
Length=1181
Score = 87.8 bits (96), Expect = 2e-12
Identities = 114/158 (72%), Gaps = 0/158 (0%)
Strand=Plus/Minus
Query 184241 AGCGGAAAAACACCGTAATGATCACGACCAACAACTGAAAGACCAGCAATTGCAAGTGTT 184300
|| ||||||||||||||| | ||||||||||| || | ||| |||| || || ||
Sbjct 317 AGTGGAAAAACACCGTAACGGTCACGACCAACCACGCTCAAACCCGCAACAGCCAGGGTC 258
Query 184301 TTTGCAGAATCACCTTCGGTAATAATAAGAGTACACTTACCAGAGTGTGTGGTACCGGCT 184360
|| || ||||| || || |||| || || ||||| |||| | ||||||||||
Sbjct 257 TTAGCTGAATCTCCCTCCGTAAGGATGAGCGTACAGGCGGCAGAATTCTTGGTACCGGCG 198
Query 184361 TTATTGGCATCGTCGAGTTTTGGAATACCCGTTATTTT 184398
| |||||||| || | |||||| || ||| | | |||
Sbjct 197 TCGTTGGCATCATCTAATTTTGGGATGCCCTTGAGTTT 160
>seq43131
Length=6507
Score = 87.8 bits (96), Expect = 2e-12
Identities = 114/158 (72%), Gaps = 0/158 (0%)
Strand=Plus/Minus
Query 184241 AGCGGAAAAACACCGTAATGATCACGACCAACAACTGAAAGACCAGCAATTGCAAGTGTT 184300
|| ||||||||||||||| | ||||||||||| || | ||| |||| || || ||
Sbjct 4719 AGTGGAAAAACACCGTAACGGTCACGACCAACCACGCTCAAACCCGCAACAGCCAGGGTC 4660
Query 184301 TTTGCAGAATCACCTTCGGTAATAATAAGAGTACACTTACCAGAGTGTGTGGTACCGGCT 184360
|| || ||||| || || |||| || || ||||| |||| | ||||||||||
Sbjct 4659 TTAGCTGAATCTCCCTCCGTAAGGATGAGCGTACAGGCGGCAGAATTCTTGGTACCGGCG 4600
Query 184361 TTATTGGCATCGTCGAGTTTTGGAATACCCGTTATTTT 184398
| |||||||| || | |||||| || ||| | | |||
Sbjct 4599 TCGTTGGCATCATCTAATTTTGGGATGCCCTTGAGTTT 4562
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 631302980972640
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