Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Spirometra_20erinaceieuropaei_20[genbank_20GCA_5F000951995.1_202014-
09-26] 482,396 sequences; 1,258,717,181 total letters
Query= NC_014766.1
Length=194022
Score E
Sequences producing significant alignments: (Bits) Value
seq270649 87.8 2e-12
seq43131 87.8 2e-12
>seq270649
Length=1181
Score = 87.8 bits (96), Expect = 2e-12
Identities = 114/158 (72%), Gaps = 0/158 (0%)
Strand=Plus/Minus
Query 176912 TTCCCACGAAGAGGGAAGACACCGTAGTGATCGCGACCAACCACAGAGAGACCCGCAACC 176971
|| || || || || || |||||||| | || ||||||||||| | |||||||||
Sbjct 326 TTGCCTCGCAGTGGAAAAACACCGTAACGGTCACGACCAACCACGCTCAAACCCGCAACA 267
Query 176972 GCGAGCGTTTTCGCAGAATCACCCTCTGTCACGATGAGTGTACACTTGCCAGATTGTGCC 177031
|| || || || || ||||| ||||| || | |||||| ||||| | |||| |
Sbjct 266 GCCAGGGTCTTAGCTGAATCTCCCTCCGTAAGGATGAGCGTACAGGCGGCAGAATTCTTG 207
Query 177032 GTACCCGCCTTGTTCGCATCATCCAATTTGGGAATACC 177069
||||| || | ||| |||||||| ||||| || || ||
Sbjct 206 GTACCGGCGTCGTTGGCATCATCTAATTTTGGGATGCC 169
>seq43131
Length=6507
Score = 87.8 bits (96), Expect = 2e-12
Identities = 114/158 (72%), Gaps = 0/158 (0%)
Strand=Plus/Minus
Query 176912 TTCCCACGAAGAGGGAAGACACCGTAGTGATCGCGACCAACCACAGAGAGACCCGCAACC 176971
|| || || || || || |||||||| | || ||||||||||| | |||||||||
Sbjct 4728 TTGCCTCGCAGTGGAAAAACACCGTAACGGTCACGACCAACCACGCTCAAACCCGCAACA 4669
Query 176972 GCGAGCGTTTTCGCAGAATCACCCTCTGTCACGATGAGTGTACACTTGCCAGATTGTGCC 177031
|| || || || || ||||| ||||| || | |||||| ||||| | |||| |
Sbjct 4668 GCCAGGGTCTTAGCTGAATCTCCCTCCGTAAGGATGAGCGTACAGGCGGCAGAATTCTTG 4609
Query 177032 GTACCCGCCTTGTTCGCATCATCCAATTTGGGAATACC 177069
||||| || | ||| |||||||| ||||| || || ||
Sbjct 4608 GTACCGGCGTCGTTGGCATCATCTAATTTTGGGATGCC 4571
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 616999354365120
| Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |